GenomeNet

Database: Pfam
Entry: DUF5889
LinkDB: DUF5889
Original site: DUF5889 
#=GF ID   DUF5889
#=GF AC   PF19237.4
#=GF DE   Family of unknown function (DUF5889)
#=GF AU   Chuguransky S;0000-0002-0520-0736
#=GF AU   Finn RD;0000-0001-8626-2148
#=GF AU   Moenttinen H;0000-0003-2461-0690
#=GF SE   Manual
#=GF GA   27.10 27.10;
#=GF TC   29.10 27.50;
#=GF NC   26.70 26.70;
#=GF BM   hmmbuild  HMM.ann SEED.ann
#=GF SM   hmmsearch --cpu 8 -Z 90746521 -E 1000 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF DR   INTERPRO; IPR045373;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This is a family of uncharacterised proteins of unknown function
#=GF CC   predominantly found in Mimiviridae. 
#=GF SQ   11
#=GS A0A650DC89_9VIRU/219-333  AC A0A650DC89.1
#=GS A0A2K9L2E6_9VIRU/163-275  AC A0A2K9L2E6.2
#=GS L7RH03_9VIRU/145-259      AC L7RH03.1
#=GS A0A1B0WMX4_9CAUD/181-260  AC A0A1B0WMX4.1
#=GS M1PFQ3_9VIRU/215-329      AC M1PFQ3.1
#=GS G5CRK6_9VIRU/159-265      AC G5CRK6.1
#=GS G5CQB5_9VIRU/247-361      AC G5CQB5.1
#=GS A0A650DBM7_9VIRU/151-255  AC A0A650DBM7.1
#=GS L7RCB5_9VIRU/157-263      AC L7RCB5.1
#=GS A0A6N1NWE0_9VIRU/35-148   AC A0A6N1NWE0.1
#=GS YR650_MIMIV/201-310       AC Q5UR07.1
A0A650DC89_9VIRU/219-333             .........NVLEYDFFCLMVVKKRLYFFNIEFDGGQHFRSNKLY....DFQNTH.RNDILKQYYMAKMNIHMLRLN.DYL...NINKEINNFIEKIITGDEYIIQNPIQPIPELFDDTNIHTGLKYFHAFYE...
A0A2K9L2E6_9VIRU/163-275             ........l-PFVFDFYGILINHGQMVQFVIECDFPTKSDNNN--....HTQNKH.ITDIIKQYILLQMNINLLRIN.PQS...NIEKEIVNFMRKIKNTTKYIIQNPIKPAVHLFDSKTPNDDLEAFCKDYD...
L7RH03_9VIRU/145-259                 .........NILMYDFFCLIVVKKRLYFFNIEFDGGQHFRSNKLY....DFQNTH.RNDILKQYYMAKMNIHMLRLN.DFL...NISKEINNFIDKITTSNEYVIHNPIQPIPELFNDTNIHTGLKFFHAFYD...
A0A1B0WMX4_9CAUD/181-260             rllfdfylp----------------FYNVCIEFDGEQHFKSIKYWggdkGFERRQ.LYDRIKNDYCKLNNIPLLRIKfDNI...NIEETIKEFLQKN------------------------------------kyk
M1PFQ3_9VIRU/215-329                 .........NILEYDFFCLIVVKKRLYFFNIEFDGGQHFRSNKLY....DFQNTH.RNDILKQYYMAKMNIHMLRLN.DYL...NINKEINNFIEKIITSDKYVIQNPIQPIPELFDDTNIHTGLKYFHAFYD...
G5CRK6_9VIRU/159-265                 .........NNLVYDYFCVFYHNGKMIVFVIDIY-DKKND-----....--SNTH.TNQIFKQYILHQMNIHLLRIN.TNR...KIKNQILIFMKKIKKTTKYICHGFIKPIPELIEINLIKKLYQDFSSDY-a..
G5CQB5_9VIRU/247-361                 .........NVLEYDFYCMMLINKCFYHFVIEFDGGQHFRTNNLY....NFEMSH.TNDIIKQYYAASMNVHMLRLN.DKL...NIKKEIKMFIKKIQSSNEYIITNSIKPISELFTNTNTHNGLECFHNFCD...
A0A650DBM7_9VIRU/151-255             .........NTFVYDFFGCLIHNNKLILFVINLEDGK--------....--QNNH.TKLLFQQYILHVMNINYLRIN.INE...DIEKHLNWFFKNLKKGKYYVCNKFIKPDKNNINSEILLKSLEKFYDDY-y..
L7RCB5_9VIRU/157-263                 .........NTFVYDFFGVLKENNRLILFVINLENQNQ-------....--NINHnTKLLFQQYILNVMNINYLRIN.INE...NIEKQLHWFFKKLKNGKYYVCNKFIKPNGNNINSEILLKSLEKFYDDY-y..
A0A6N1NWE0_9VIRU/35-148              ........c-VLEYDFYCILIHKNKLIQFVIEYDGNFHYVQSNFV....NFEEYH.KRDVIKQYYLHEMNVHLLRLI.GRF...NTD-MIECFIDKLLDCQYYVAINKIKPIKKYFLNNDIHKGLVYFGNYF-n..
YR650_MIMIV/201-310                  ........i-PFVFDFFVVLVYRERLILFVIEVDRD---INNPLY....-----H.TESIIKQIILFQMNVFVLRIS.QQHlkdNLKKRIIRFIKNAVSSKVYLSEKYITPNINLIDMDLVKLELEKFYQSY-k..
#=GC seq_cons                        .........Nsh.YDFFslllhpp+LhhFVIEhDssp+.cssphh....thppsH.ppDIlKQYhhtpMNIahLRlN.sph...NIcKcIppFlcKlhsuphYlhps.IpPhscLhsss.l+puLchFas.Y....
//
DBGET integrated database retrieval system