GenomeNet

Database: Pfam
Entry: DUF5889
LinkDB: DUF5889
Original site: DUF5889 
#=GF ID   DUF5889
#=GF AC   PF19237.1
#=GF DE   Family of unknown function (DUF5889)
#=GF AU   Chuguransky S;0000-0002-0520-0736
#=GF AU   Finn RD;0000-0001-8626-2148
#=GF AU   Moenttinen H;0000-0003-2461-0690
#=GF SE   Manual
#=GF GA   27.10 27.10;
#=GF TC   29.10 27.50;
#=GF NC   26.70 26.70;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 57096847 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This is a family of uncharacterised proteins of unknown function
#=GF CC   predominantly found in Mimiviridae. 
#=GF SQ   13
#=GS A0A2P1EMH3_9VIRU/157-261  AC A0A2P1EMH3.1
#=GS A0A2K9L2E6_9VIRU/163-275  AC A0A2K9L2E6.2
#=GS YR650_MIMIV/201-310       AC Q5UR07.1
#=GS A0A2P1EJM8_9VIRU/159-265  AC A0A2P1EJM8.1
#=GS L7RCB5_9VIRU/157-263      AC L7RCB5.1
#=GS M1PFQ3_9VIRU/215-329      AC M1PFQ3.1
#=GS K7YIM3_9VIRU/247-361      AC K7YIM3.1
#=GS G5CQB5_9VIRU/247-361      AC G5CQB5.1
#=GS A0A1B0WKF8_9CAUD/181-260  AC A0A1B0WKF8.1
#=GS A0A2P1EKI2_9VIRU/219-333  AC A0A2P1EKI2.1
#=GS L7RH03_9VIRU/145-259      AC L7RH03.1
#=GS A0A2P1EHM0_9VIRU/246-360  AC A0A2P1EHM0.1
#=GS G5CRK6_9VIRU/159-265      AC G5CRK6.1
A0A2P1EMH3_9VIRU/157-261             .........NTFVYDFFGCLIHNNKLILFVINLENGKQ---N---....----NY.TKLLFQQYILHVMNINYLRIN.INE...DIEKHLNWFFKNLKKRKYYVCNKFIKPDKNKINSEILLKSLEKFYDDY-y..
A0A2K9L2E6_9VIRU/163-275             ........l-PFVFDFYGILINHGQMVQFVIECDFPTKSDNNN--....HTQNKH.ITDIIKQYILLQMNINLLRIN.PQS...NIEKEIVNFMRKIKNTTKYIIQNPIKPAVHLFDSKTPNDDLEAFCKDYD...
YR650_MIMIV/201-310                  ........i-PFVFDFFVVLVYRERLILFVIEVDRD---INNPLY....-----H.TESIIKQIILFQMNVFVLRIS.QQHlkdNLKKRIIRFIKNAVSSKVYLSEKYITPNINLIDMDLVKLELEKFYQSY-k..
A0A2P1EJM8_9VIRU/159-265             .........NNFVYDYFCVFYHNGKIIVFIIDT--YDKL--N---....-DSNTH.TNQIFKQYILHQMNIHLLRIN.TNH...KIKNQILIFMKKIKKTTKYICHGFIKPIPELIDINLIKKLYQDFSSDY-a..
L7RCB5_9VIRU/157-263                 .........NTFVYDFFGVLKENNRLILFVINLENQNQ-------....--NINHnTKLLFQQYILNVMNINYLRIN.INE...NIEKQLHWFFKKLKNGKYYVCNKFIKPNGNNINSEILLKSLEKFYDDY-y..
M1PFQ3_9VIRU/215-329                 .........NILEYDFFCLIVVKKRLYFFNIEFDGGQHFRSNKLY....DFQNTH.RNDILKQYYMAKMNIHMLRLN.DYL...NINKEINNFIEKIITSDKYVIQNPIQPIPELFDDTNIHTGLKYFHAFYD...
K7YIM3_9VIRU/247-361                 .........NVLEYDFYCMMLINKCFYHFVIEFDGGQHFRTNNLY....NFEMSH.TNDIIKQYYAASMNVHMLRLN.DKL...NIKKEIKMFIKKIQSSNEYIITNSIKPISELFTNTNTHNGLECFHNFCD...
G5CQB5_9VIRU/247-361                 .........NVLEYDFYCMMLINKCFYHFVIEFDGGQHFRTNNLY....NFEMSH.TNDIIKQYYAASMNVHMLRLN.DKL...NIKKEIKMFIKKIQSSNEYIITNSIKPISELFTNTNTHNGLECFHNFCD...
A0A1B0WKF8_9CAUD/181-260             rllfdfylp----------------FYNVCIEFDGEQHFKSIKYWggdkGFERRQ.LYDRIKNDYCKLNNIPLLRIKfDNI...NIEETIKEFLQKN------------------------------------kyk
A0A2P1EKI2_9VIRU/219-333             .........NVLQYDFFCLKVVKKHMYIFNIEFDGGQHFKSNKLY....DFQNIH.RNDILKQYYMVKMNIHMLRLN.DFL...NIKKEINNFIEKIITSDKYIIQNPIQPIPELFDDTNIHTGLKYFHAFYD...
L7RH03_9VIRU/145-259                 .........NILMYDFFCLIVVKKRLYFFNIEFDGGQHFRSNKLY....DFQNTH.RNDILKQYYMAKMNIHMLRLN.DFL...NISKEINNFIDKITTSNEYVIHNPIQPIPELFNDTNIHTGLKFFHAFYD...
A0A2P1EHM0_9VIRU/246-360             .........NVLEYDFYCMMLINKCFYHFVIEFDGGQHFRTNNLY....NFEMSH.TNDIIKQYYAASMNVHMLRLN.DKL...NIKKEIKIFIKKIQSSNEYVITNSIEPISELFTDTDAHNGLECFHNFCD...
G5CRK6_9VIRU/159-265                 .........NNLVYDYFCVFYHNGKMIVFVIDIY-DKKND-----....--SNTH.TNQIFKQYILHQMNIHLLRIN.TNR...KIKNQILIFMKKIKKTTKYICHGFIKPIPELIEINLIKKLYQDFSSDY-a..
#=GC seq_cons                        .........Nsh.YDFFClhlhpp+hhhFVIEhDssp+hcsNpha....thp.sH.TNDIlKQYhhtpMNIHhLRlN.sph...NIcKcIphFlKKIpsoscYlhps.IcPIsELhsss.l+puLcpFas.Y....
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