GenomeNet

Database: Pfam
Entry: FliC-like_3rd
LinkDB: FliC-like_3rd
Original site: FliC-like_3rd 
#=GF ID   FliC-like_3rd
#=GF AC   PF22370.2
#=GF DE   Flagellin, beta sheet domain
#=GF AU   Bateman A;0000-0002-6982-4660
#=GF AU   Lazaro Pinto Beatriz;0000-0001-6837-2941
#=GF SE   ECOD:EF18792
#=GF GA   27.00 27.00;
#=GF TC   74.30 254.70;
#=GF NC   24.00 19.60;
#=GF BM   hmmbuild  HMM.ann SEED.ann
#=GF SM   hmmsearch --cpu 8 -E 1000 -Z 90746521 HMM pfamseq
#=GF TP   Domain
#=GF RC   Paper describing PDB structure 3v47
#=GF RN   [1]
#=GF RM   22344444
#=GF RT   Structural basis of TLR5-flagellin recognition and signaling.
#=GF RA   Yoon SI, Kurnasov O, Natarajan V, Hong M, Gudkov AV, Osterman
#=GF RA   AL, Wilson IA;
#=GF RL   Science. 2012;335:859-864.
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   This domain is found in Flagellin from Salmonella dublin (FliC)
#=GF CC   and similar sequences from proteobacteria. FliC is the subunit
#=GF CC   protein which polymerises to form the filaments of bacterial
#=GF CC   flagella. Binding of FliC to the Toll-like receptor 5 (TLR5)
#=GF CC   leads to activation of innate immune responses against
#=GF CC   flagellated bacteria. It consists of four domains. This entry
#=GF CC   represents its third domain [1].
#=GF SQ   1
#=GS A0A0L7T0A6_9GAMM/280-399  AC A0A0L7T0A6.1
A0A0L7T0A6_9GAMM/280-399             ASFKTTVDGKDVNMSITGSTDTSGADAVLGGDKLYTNAVSGQLTTTETIDNRAAKMSDLDLQSATKQGSTLKINGKQYDVNAAGDQVTAQFDDGKGTNTTVAKTVYLGRTEAGAATLINE
#=GC seq_cons                        ASFKTTVDGKDVNMSITGSTDTSGADAVLGGDKLYTNAVSGQLTTTETIDNRAAKMSDLDLQSATKQGSTLKINGKQYDVNAAGDQVTAQFDDGKGTNTTVAKTVYLGRTEAGAATLINE
//
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