#=GF ID Foamy_BEL
#=GF AC PF03274.20
#=GF DE Foamy virus BEL 1/2 protein
#=GF AU Mifsud W;0000-0002-9805-6461
#=GF SE Pfam-B_4337 (release 6.5)
#=GF GA 24.00 24.00;
#=GF TC 28.10 28.50;
#=GF NC 22.60 22.00;
#=GF BM hmmbuild HMM.ann SEED.ann
#=GF SM hmmsearch -Z 90746521 -E 1000 --cpu 8 HMM pfamseq
#=GF TP Family
#=GF RN [1]
#=GF RM 11017797
#=GF RT Characterization of the humoral immune response and virus
#=GF RT replication in cats experimentally infected with feline foamy
#=GF RT virus.
#=GF RA Alke A, Schwantes A, Zemba M, Flugel RM, Lochelt M;
#=GF RL Virology 2000;275:170-176.
#=GF RN [2]
#=GF RM 11129637
#=GF RT Human foamy virus Bel 1 transactivator/estrogen receptor fusion
#=GF RT proteins allow inducible transactivation of both human foamy
#=GF RT virus promoters.
#=GF RA Yang P, Flugel RM, Li W, Lochelt M;
#=GF RL Virus Genes 2000;21:209-213.
#=GF DR INTERPRO; IPR004956;
#=GF DR SO; 0100021; polypeptide_conserved_region;
#=GF SQ 9
#=GS BEL1_SFVCP/29-136 AC Q87042.1
#=GS BEL2_SFV3L/9-207 AC P27403.2
#=GS BET_FOAMV/29-301 AC P89873.1
#=GS BEL1_SFVCP/135-240 AC Q87042.1
#=GS BET_SFVCP/29-300 AC Q87043.2
#=GS BEL1_FOAMV/29-136 AC P14353.2
#=GS BEL1_FOAMV/128-240 AC P14353.2
#=GS BEL1_SFV3L/126-240 AC P27402.1
#=GS Q7SIS3_9RETR/4-134 AC Q7SIS3.1
BEL1_SFVCP/29-136 .......ENAGEGDLVIAEEPEENPRRPRRYTKRDVKCVSYHAYKELEDKHPHHIKLQDWIPKPEEM----------------SKSICKRLILCGLYSGEKAREI.LKK--PFTVSWEQSE-------------------TNPDCFIV-SYTC-----------------------------------------------------------.--------------------------------------------------------------------------------------.-----------i.............................................
BEL2_SFV3L/9-207 larenls------------------------------------------------------------------NPESGLILLEDTERSHSSLRIGQNAPDGVWPLgNSPILPVVTPWPLCQDHAAPSIWTLLDAYWRGYQDQNLEPPKWLWLCLEDPSGNKYTGTQFLVPPLGLVKIRLYQNLTVVYICQSI--DPWENENPTGGRRDPTRR.YGCRIACDPVYCVKIVWE---GNLW------DKKDQPCWLIRLKEGHNHGAKE---------------------------------.-----------lsqrdikilge...................................
BET_FOAMV/29-301 .......ENAGEGELTIAEEPEENPRRPRRYTKREVKCVSYHAYKEIEDKHPQHIKLQDWIPTPEEMIAQKVQNQDLGTILSFDVTCLKSITSLGRNDPGDDPSI.MSHVLPVVTPWPMSQDHYAPTLFGILDRYYQGYLKSPATYQTWKFTCQVDPSGKRFMETQFWVPPLGQVNIQFYKNYQILTCCQAV--DPFANIFHGTDEEMFDID.SGPDVWCSPSLCFKVIYE---GAMG------QKQEQKTWL------CRLGHGHRMGACDYRKVDLYAMR-----------------.-----------qgkenpygdrgdaalqy.............................
BEL1_SFVCP/135-240 ......c--------------------------------------------------------------------------------------------------.--------------------------------------------------------------------------------IFCDAVIHDPMPVVW----------D.SEVEIW--------VKYKPLRGIVGSAVFIMEKHQKNCSLVKPSTSCPEGPKPRRRHDPVLRCDMFEKHHKPRPKRSRKRSIDHES.CASSGDTVANE..............................................
BET_SFVCP/29-300 .......ENAGEGDLVIAEEPEENPRRPRRYTKRDVKCVSYHAYKELEDKHPHHIKLQDWIPKPEEMVAQKVQNQDVGTILSFDVTCLKSITSLGRNDPGNDPSI.MSHVLPVVTPWPMSQDHYAPTLFGLLDRYYKGYLENPATFQTWKFTCQEDPSGKRYMGTQFWVPPLGQVNIQFYKNYQIVTCCQAL--DPFANIFHGTEEEMYDID.SGPDVWCTPSLCFKVIYE---GAIG------QKQEQKSWL------CRLGYGHRMGANDYRRVDLYAMKQ----------------.-----------gkknpygdkgdaalq...............................
BEL1_FOAMV/29-136 .......ENAGEGELTIAEEPEENPRRPRRYTKREVKCVSYHAYKEIEDKHPQHIKLQDWIPTPEEM----------------SKSLCKRLILCGLYSAEKASEI.LRM--PFTVSWEQSD-------------------TDPDCFIV-SYTC-----------------------------------------------------------.--------------------------------------------------------------------------------------.-----------i.............................................
BEL1_FOAMV/128-240 .cfivsy--------------------------------------------------------------------------------------------------.------------------------------------------------------------------------------TCIFCDAVIHDPMPIRW----------D.PEVGIW--------VKYKPLRGIVGSAVFIMHKHQRNCSLVKPSTSCSEGPKPRPRHDPVLRCDMFEKHHKPRQKRPRRRSIDNES.CASSSDTMANE..............................................
BEL1_SFV3L/126-240 ..edsqy--------------------------------------------------------------------------------------------------.-------------------------------------------------------------------------FEIEYHCKMCMTVIHEPMPVSY----------D.KKTGLW--------IKMGPLRGDIGSVVHTCRRHYERCMSALPSSG--EPLKPRVRANPVRRYREKSLIVADRPKRSRWGVAPREQpNTSSGDAM---al............................................
Q7SIS3_9RETR/4-134 .....sp--------------------------------------------------------------------------------------------------.----------------------------------------QPWQFQCLVDKYGKKCIMTYFWMPPLGQVTIRLYNNLTVITICQGL--DPFVNLND-CGSNLDESDcSEPDVFCCGPLCYKLCYE------G-------------------------------------------------------------.-----------halsfdklrcwllhlkgghpdgasnftkndmrvlqlgkvnpygekg
#=GC seq_cons ......................................................................................................................................................a.C...............................hhhhCpul..DPhss............D..tstla........lhac...G.hG......p+p.p.s...........s.t..............................................h.............................................
//
