GenomeNet

Database: Pfam
Entry: MsddA-like
LinkDB: MsddA-like
Original site: MsddA-like 
#=GF ID   MsddA-like
#=GF AC   PF24174.1
#=GF DE   Bacterial deaminase MsddA-like domain
#=GF AU   Johnson S;0000-0001-8261-9015
#=GF AU   Lazaro Pinto Beatriz;0000-0001-6837-2941
#=GF SE   Sean Johnson
#=GF GA   27.00 27.00;
#=GF TC   28.20 68.20;
#=GF NC   26.80 19.40;
#=GF BM   hmmbuild  HMM.ann SEED.ann
#=GF SM   hmmsearch -E 1000 --cpu 8 -Z 90746521 HMM pfamseq
#=GF TP   Domain
#=GF CL   CL0109
#=GF DR   INTERPRO; IPR056387;
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   This domain is found in bacterial deaminases. Some members of
#=GF CC   this family also contain RHS repeats.
#=GF SQ   3
#=GS A0A6N8J7R7_9BACT/1244-1374  AC A0A6N8J7R7.1
#=GS A0A7H0GLC1_9BURK/1-91       AC A0A7H0GLC1.1
#=GS A0A2S8AG27_9FLAO/1-119      AC A0A2S8AG27.1
A0A6N8J7R7_9BACT/1244-1374             .IAREAHNA-LKRNIPDKPEIGFNQSTVSIGEGTLPSGEKQLFASGNGAKLTPKQRQILIDHGIPAENIYSGVAKMEQPRPTSKLKS-----VRKAYNLNNHAERVIIRNAPEGTKFKKWGISWGPNQKNAACDNCKP.......
A0A7H0GLC1_9BURK/1-91                  m--------------------------------KLPNGKTTLYAAGSSGKLNPRQRARLQELGVPEANIIHGK-GSALP------KE------GNPINV-NHAEQIIIRNIPEGSQVTRKGISWGVNKQM--------hlvctan
A0A2S8AG27_9FLAO/1-119                 .MAREVHNLA-----RDERAL--RSQTVSIAKVE-KDGVSSLYASGSGASLNPRQREKLEELGVPKENIFSGK-KFKVF------IDGERGIQTK--LA-NHAERVIERNIPLDSEIKEFGISWSSKQKNEMCPNCKE.......
#=GC seq_cons                          .hAREsHNh.......Dc.tl..pppTVSIucscLPsGcooLYASGSGAKLNPRQRp+LpELGVPcENIaSGK.KhclP......K-......sKshNl.NHAERVIIRNIPEGSclK+aGISWGsNQKNthCsNCK........
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