GenomeNet

Database: Pfam
Entry: Nanovirus_C8
LinkDB: Nanovirus_C8
Original site: Nanovirus_C8 
#=GF ID   Nanovirus_C8
#=GF AC   PF05629.16
#=GF DE   Nanovirus component 8 (C8) protein
#=GF AU   Moxon SJ;0000-0003-4644-1816
#=GF SE   Pfam-B_9354 (release 8.0)
#=GF GA   25.00 25.00;
#=GF TC   208.70 208.60;
#=GF NC   21.60 21.50;
#=GF BM   hmmbuild  HMM.ann SEED.ann
#=GF SM   hmmsearch --cpu 8 -E 1000 -Z 90746521 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   9880028
#=GF RT   Ten distinct circular ssDNA components, four of which encode
#=GF RT   putative replication-associated proteins, are associated with
#=GF RT   the faba bean necrotic yellows virus genome. 
#=GF RA   Katul L, Timchenko T, Gronenborn B, Vetten HJ; 
#=GF RL   J Gen Virol 1998;79:3101-3109.
#=GF DR   INTERPRO; IPR008706;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This family consists of a group of 17.4 kDa nanovirus proteins
#=GF CC   which are highly related to the faba bean necrotic yellows virus
#=GF CC   component 8 protein whose function is unknown [1].
#=GF SQ   12
#=GS A0A2S0U3Q5_9VIRU/3-153  AC A0A2S0U3Q5.1
#=GS NSP_FBNY1/3-153         AC Q9WIK1.1
#=GS I6QAH4_9VIRU/3-153      AC I6QAH4.1
#=GS A0A482G1M8_9VIRU/3-153  AC A0A482G1M8.1
#=GS NSP_MDV1/3-153          AC Q9Z0D0.1
#=GS D2WHV5_9VIRU/3-153      AC D2WHV5.1
#=GS NSP_FBNY2/3-153         AC O91251.1
#=GS A0A2H4T2E1_9VIRU/3-151  AC A0A2H4T2E1.1
#=GS NSP_BBTVA/2-154         AC Q65388.1
#=GS B0LBX4_9VIRU/2-154      AC B0LBX4.1
#=GS A0A411K8C9_SCSV/3-153   AC A0A411K8C9.1
#=GS NSP_SCSVF/3-153         AC Q87011.1
A0A2S0U3Q5_9VIRU/3-153             DWFESPLKTCSHVCDFPTINNHS---EQELFCCDGLGGKFKDARKVLLVSCAVSFTGSFYGNDRNVRGQIQLMMEQEDGVLRPIGFIPIGGYLYHNDYGYYQGEKTFNLNLESQYILAKDDYMKRFVIKIVNDKGLDSNCDVKIYICHSMRIK-l
NSP_FBNY1/3-153                    DWFSSPLKTCTHVCDFPSLAGDP---QQEIMCCDSMKNKLQDSRKVLLVSCSVSFNGSFYGGNRNVRGQLQISMVEDDGVCRPIGYVPIGGYLYHNDYGYYEGARTFNLDLESQYLKKDEDYNRKFLVSVFNENGLDSQCDLKVFIVHSIRIKV.
I6QAH4_9VIRU/3-153                 DWFASPLKTCSHVLDFPSLAGNP---QQAFRCCDTMKGKLEEPRKVLLASCSVSFNGSFYGGNRNVRGRIQISMLEDDGVFRPIGFLPIGGYLYHNDYGYYEGQKTFMLEMESPYLRKDEDYERPFTVTVINDNGLDVSCDLKVVVVHTMRIKV.
A0A482G1M8_9VIRU/3-153             EWFHSSFKTCSHVIDYPVITSQN---EEEIDCCDGLKNILKEPRRVLLVSCEISFNGSFYGNDRNVRGQVVLSMYQDDGVKRPVGFVPFGGYMYHNDYGYYQGREVINLDLESDYINPDEDYRKRFVIDVINCSGLEDRCDIKVYVICNMRIKV.
NSP_MDV1/3-153                     DWFASPLKTCTHVCDFPTLAGDP---SQEITCCDSMKNKLNDSRKVLLVSCSVSFNGSFYGGNRNVRGQLQISMLEDDGVCRPIGYVPIGGYLYHNDYGYYEGEKTFNLDIESQYLKKDEDYNRKFIVSVLNENGLDSLCDLKVFIVHALRIKV.
D2WHV5_9VIRU/3-153                 DWFSSPLKTCTHVCDFPSLAGNP---QQEIMCCDSMKDKLNDSRKVLLVSCSVSFNGSFYGGNRNVRGQLQISMMEDDGVCRPIGYLPIGGYLYHNDYGYYEGEKTFNLDIESQYLKKDEDYRRKFVITVLNENGLDTQCDLKMFIVYSLRIKV.
NSP_FBNY2/3-153                    DWFSSPLKTCTHVCDFPSLAGDP---QQEIMCCDSMKNKLQDSRKVLLVSCSVSFNGSFYGGNRNVRGQLQISMVEDDGVCRPIGYVPIGGYLYHNDYGYYEGTRTFNLDLESQYLKKDEDYNRKFLVSILNENGLDSQCDLKVFIVHSIRIKV.
A0A2H4T2E1_9VIRU/3-151             EWFSSPLKTCTHVCDFPSLAATP---QQEIWCCDGMKDKLNDAGKVLLVSCSVSFNGSFYGANRNVRGQLQLSMM--AGVLRPIGFLPIGGYLYHNDYGYFQGQGIFNLDIESQYLKKDEDYTRLFVVTILNENGLDSGCDMKVFVVHNLRIKV.
NSP_BBTVA/2-154                    DWAESQFKTCTHGCDWKKISSDSADNRQYVPCVDSGAGRKS-PRKVLLRSIEAVFNGSFSGNNRNVRGFLYVSIRDDDGEMRPVLIVPFGGYGYHNDFYYFEGKGKVECDISSDYVAPGIDWSRDMEVSISNSNNCNELCDLKCYVVCSLRIKE.
B0LBX4_9VIRU/2-154                 DWMESQFKTCTHGCDWKAIAPEAQDNIQVITCSDSGYGRKN-PRKVLLRSIQIGFNGSFRGSNRNVRGFIYVSVRQDDGQMRPIMVVPFGGYGYHNDYYYFEGQSSTNCEIVSDYIPAGQDWSRDMEISISNSNNCNQECDIKCYVVCNLRIKE.
A0A411K8C9_SCSV/3-153              DWFHSALKTCTHVCDFSDIKASS---QQDFFCCDSMRGKLSEPRKVLLVSCFVSFTGSFYGSNRNVRGQVQLGMQQDDGVVRPIGYIPIGGYLYHDDYGYYQGEKTFNLDIESDYLKPDEDFWKRFTINIVNDKGLDDRCDVKCYVVHTMRIKV.
NSP_SCSVF/3-153                    DWFHSALKTCTHVCDFSDIKASS---QQDFFCCDSMRGKLSEPRKVLLVSCFVSFTGSFYGSNRNVRGQVQLGMQQDDGVVRPIGYIPIGGYLYHDDYGYYQGEKTFNLDIESDYLKPDEDFWKRFTINIVNDKGLDDRCDVKCYVVHTMRIKV.
#=GC seq_cons                      DWFpSsLKTCTHVCDFPsluuss...pQ-lhCCDSM+sKLp-sRKVLLVSCpVSFNGSFYGuNRNVRGQlQlSMhpDDGVhRPIGalPIGGYLYHNDYGYYpGp+TFNLDlESpYL+tDEDYpR+FhlollN-NGLDspCDlKsalVHohRIKV.
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