GenomeNet

Database: Pfam
Entry: Nucleoporin_FG
LinkDB: Nucleoporin_FG
Original site: Nucleoporin_FG 
#=GF ID   Nucleoporin_FG
#=GF AC   PF13634.9
#=GF DE   Nucleoporin FG repeat region
#=GF AU   Bateman A;0000-0002-6982-4660
#=GF SE   Jackhmmer:Q5A223
#=GF GA   32.20 3.20;
#=GF TC   32.20 5.80;
#=GF NC   32.10 -999999.99;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 61295632 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF WK   Nucleoporin
#=GF CL   CL0647
#=GF RN   [1]
#=GF RM   20513410
#=GF RT   Hydrophilic linkers and polar contacts affect aggregation of FG
#=GF RT   repeat peptides.
#=GF RA   Dolker N, Zachariae U, Grubmuller H;
#=GF RL   Biophys J. 2010;98:2653-2661.
#=GF RN   [2]
#=GF RM   17082456
#=GF RT   FG-rich repeats of nuclear pore proteins form a
#=GF RT   three-dimensional meshwork with hydrogel-like properties.
#=GF RA   Frey S, Richter RP, Gorlich D;
#=GF RL   Science. 2006;314:815-817.
#=GF DR   INTERPRO; IPR025574;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This family includes a number of FG repeats that are found in
#=GF CC   nucleoporin proteins. This family includes the yeast
#=GF CC   nucleoporins Nup116, Nup100, Nup49, Nup57 and Nup 145.
#=GF SQ   12130
#=GS W9J9H0_FUSOX/363-455        AC W9J9H0.1
#=GS A0A1Y2DK70_9PEZI/7-106      AC A0A1Y2DK70.1
#=GS H3GBC1_PHYRM/622-718        AC H3GBC1.1
#=GS A0A2A9NGQ4_9AGAR/460-574    AC A0A2A9NGQ4.1
#=GS A0A1X6NUP9_PORUM/503-596    AC A0A1X6NUP9.1
#=GS U6MXS1_9EIME/1737-1833      AC U6MXS1.1
#=GS E3MG97_CAERE/141-222        AC E3MG97.1
#=GS NUP98_DROME/376-466         AC Q9VCH5.3
#=GS A0A178AV43_9PLEO/64-184     AC A0A178AV43.1
#=GS K0TB43_THAOC/594-680        AC K0TB43.1
#=GS T0SDV4_SAPDV/992-1077       AC T0SDV4.1
#=GS A8Q0A2_MALGO/739-832        AC A8Q0A2.1
#=GS A0A182GH62_AEDAL/126-215    AC A0A182GH62.1
#=GS A0A420HD08_9PEZI/482-599    AC A0A420HD08.1
#=GS C5M5P4_CANTT/181-271        AC C5M5P4.1
#=GS A0A6J3M3H1_9PEZI/493-569    AC A0A6J3M3H1.1
#=GS A0A074WEQ2_9PEZI/554-673    AC A0A074WEQ2.1
#=GS A0A1E3NX96_WICAA/558-692    AC A0A1E3NX96.1
#=GS X0CRI7_FUSOX/237-329        AC X0CRI7.1
#=GS A0A4T0WHN4_9PEZI/177-286    AC A0A4T0WHN4.1
#=GS I2FRR7_USTH4/524-610        AC I2FRR7.1
#=GS N6TSD0_DENPD/3-84           AC N6TSD0.1
#=GS G0QME1_ICHMG/486-588        AC G0QME1.1
#=GS A0A2T4AFK4_TRIHA/524-626    AC A0A2T4AFK4.1
#=GS A0A5N6L084_9ROSI/157-259    AC A0A5N6L084.1
#=GS A0A395N2C3_9HYPO/9-116      AC A0A395N2C3.1
#=GS A0A5N5PMZ8_9PEZI/72-148     AC A0A5N5PMZ8.1
#=GS C9SWM6_VERA1/307-405        AC C9SWM6.1
#=GS A0A6I8THT8_AEDAE/246-330    AC A0A6I8THT8.1
#=GS A0A1F5LT16_9EURO/65-168     AC A0A1F5LT16.1
#=GS A0A673ZF34_SALTR/229-311    AC A0A673ZF34.1
#=GS A0A0P7BHB8_9HYPO/324-440    AC A0A0P7BHB8.1
#=GS B8N391_ASPFN/419-505        AC B8N391.1
#=GS A0A024VWW1_PLAFA/329-457    AC A0A024VWW1.1
#=GS A0A4U0XIZ0_9PEZI/521-609    AC A0A4U0XIZ0.1
#=GS H2AR21_KAZAF/438-539        AC H2AR21.1
#=GS A0A420RJY3_FUSOX/327-451    AC A0A420RJY3.1
#=GS A0A0F9WTQ9_9MICR/81-178     AC A0A0F9WTQ9.1
#=GS J5K268_BEAB2/305-425        AC J5K268.1
#=GS B8LWK6_TALSN/519-616        AC B8LWK6.1
#=GS C5DR03_ZYGRC/101-177        AC C5DR03.1
#=GS M2LCA4_BAUPA/2-104          AC M2LCA4.1
#=GS A0A7H8QVW6_9EURO/86-192     AC A0A7H8QVW6.1
#=GS J5SBL3_SACK1/508-604        AC J5SBL3.1
#=GS A0A1V6R9N6_9EURO/34-131     AC A0A1V6R9N6.1
#=GS A0A0B2VTA9_TOXCA/8-77       AC A0A0B2VTA9.1
#=GS A0A3Q3X3D5_MOLML/77-166     AC A0A3Q3X3D5.1
#=GS A0A059JCH2_TRIIM/2-91       AC A0A059JCH2.1
#=GS E2LNK9_MONPE/86-166         AC E2LNK9.1
#=GS D8M4Q6_BLAHO/347-449        AC D8M4Q6.1
#=GS A0A093YBJ3_9PEZI/136-214    AC A0A093YBJ3.1
#=GS A8X7Z9_CAEBR/196-273        AC A8X7Z9.2
#=GS B0CXK4_LACBS/480-599        AC B0CXK4.1
#=GS A0A1X7QZ93_9SACH/1-107      AC A0A1X7QZ93.1
#=GS A0A367YEP2_9ASCO/1-103      AC A0A367YEP2.1
#=GS W2S588_9EURO/245-362        AC W2S588.1
#=GS Q4N5D0_THEPA/501-587        AC Q4N5D0.1
#=GS G4MTW8_MAGO7/129-234        AC G4MTW8.1
#=GS A0A0N1HUX5_9EURO/242-357    AC A0A0N1HUX5.1
#=GS A0A4U6XT93_9PEZI/96-187     AC A0A4U6XT93.1
#=GS G9NJK6_HYPAI/1-104          AC G9NJK6.1
#=GS J9FJQ2_9SPIT/361-454        AC J9FJQ2.1
#=GS J9JP64_ACYPI/1467-1572      AC J9JP64.2
#=GS A0A016UIN7_9BILA/537-624    AC A0A016UIN7.1
#=GS A0A448YLW5_BRENA/444-537    AC A0A448YLW5.1
#=GS A0A329SGF8_9STRA/411-522    AC A0A329SGF8.1
#=GS A0A665UAE1_ECHNA/191-238    AC A0A665UAE1.1
#=GS A0A1Y2WQ12_9PEZI/455-523    AC A0A1Y2WQ12.1
#=GS K1VTX7_TRIAC/575-666        AC K1VTX7.1
#=GS A0A175VXV2_9PEZI/245-338    AC A0A175VXV2.1
#=GS A0A177WIZ6_BATDL/234-325    AC A0A177WIZ6.1
#=GS A0A1Y2AT71_9TREE/672-781    AC A0A1Y2AT71.1
#=GS A0A2I3LPU2_PAPAN/288-411    AC A0A2I3LPU2.1
#=GS A0A367YEK4_9ASCO/154-235    AC A0A367YEK4.1
#=GS A0A0N4X7Z7_HAEPC/334-419    AC A0A0N4X7Z7.1
#=GS A0A158QAW8_ENTVE/292-390    AC A0A158QAW8.1
#=GS A0A2C5WTX8_9PEZI/1-97       AC A0A2C5WTX8.1
#=GS A0A238FKE8_9BASI/392-476    AC A0A238FKE8.1
#=GS A0A642UUZ8_DIURU/522-600    AC A0A642UUZ8.1
#=GS A0A395T4C4_9HYPO/548-651    AC A0A395T4C4.1
#=GS A0A369H9V8_9HYPO/299-393    AC A0A369H9V8.1
#=GS W4KC10_HETIT/80-167         AC W4KC10.1
#=GS A0A5C3NEL2_9AGAM/266-367    AC A0A5C3NEL2.1
#=GS A0A512UL07_9ASCO/170-284    AC A0A512UL07.1
#=GS A0A2T9YGH8_9FUNG/424-512    AC A0A2T9YGH8.1
#=GS E3JY06_PUCGT/533-611        AC E3JY06.2
#=GS A0A3D8SRM3_9HELO/567-657    AC A0A3D8SRM3.1
#=GS A0A316UKI9_9BASI/80-167     AC A0A316UKI9.1
#=GS A0A075A3R3_9TREM/129-210    AC A0A075A3R3.1
#=GS G4MVE3_MAGO7/943-1039       AC G4MVE3.1
#=GS A0A0C3RUS5_PHLGI/47-127     AC A0A0C3RUS5.1
#=GS A8P0S5_COPC7/1-155          AC A8P0S5.1
#=GS D8Q3U7_SCHCM/115-208        AC D8Q3U7.1
#=GS A0A0A2VZS1_BEABA/229-331    AC A0A0A2VZS1.1
#=GS H2ASQ6_KAZAF/548-651        AC H2ASQ6.1
#=GS A0A423WYD3_9PEZI/502-573    AC A0A423WYD3.1
#=GS A0A5N6UXG9_9EURO/96-197     AC A0A5N6UXG9.1
#=GS A0A5J5F8S3_9PEZI/162-286    AC A0A5J5F8S3.1
#=GS A0A2G7G1D5_9EURO/116-218    AC A0A2G7G1D5.1
#=GS W5J9E8_ANODA/235-314        AC W5J9E8.1
#=GS E4X8J6_OIKDI/63-181         AC E4X8J6.1
#=GS G3JF53_CORMM/237-308        AC G3JF53.1
#=GS A0A0M9VS80_9HYPO/377-464    AC A0A0M9VS80.1
#=GS A0A0F9ZQI8_TRIHA/463-578    AC A0A0F9ZQI8.1
#=GS L0B253_THEEQ/382-464        AC L0B253.1
#=GS A0A067TAU1_GALM3/144-227    AC A0A067TAU1.1
#=GS A0A443HP61_BYSSP/55-136     AC A0A443HP61.1
#=GS A0A179HH04_PURLI/134-247    AC A0A179HH04.1
#=GS A0A067TAU1_GALM3/76-155     AC A0A067TAU1.1
#=GS A0A1R0GXB2_9FUNG/102-197    AC A0A1R0GXB2.1
#=GS A0A2P4ZXL5_9HYPO/1032-1138  AC A0A2P4ZXL5.1
#=GS A0A1Y1XC69_9FUNG/178-270    AC A0A1Y1XC69.1
#=GS U6M525_EIMMA/739-844        AC U6M525.1
#=GS H8ZD29_NEMS1/951-1037       AC H8ZD29.1
#=GS A0A318Z0U3_9EURO/1-111      AC A0A318Z0U3.1
#=GS E4V1D8_ARTGP/495-579        AC E4V1D8.1
#=GS W2ZAR0_PHYPR/708-777        AC W2ZAR0.1
#=GS A0A2P7YQM1_9ASCO/451-547    AC A0A2P7YQM1.1
#=GS A7TPT5_VANPO/207-290        AC A7TPT5.1
#=GS A0A109FFA9_9BASI/2-65       AC A0A109FFA9.1
#=GS J5K140_BEAB2/564-652        AC J5K140.1
#=GS A0A210R1C4_MIZYE/58-152     AC A0A210R1C4.1
#=GS A0A0V0W6U3_9BILA/251-342    AC A0A0V0W6U3.1
#=GS F4QFB8_CAVFA/1613-1718      AC F4QFB8.1
#=GS A0A6A0A546_HAELA/300-374    AC A0A6A0A546.1
#=GS A0A1V1T0B0_9FUNG/414-488    AC A0A1V1T0B0.1
#=GS A0A0C9W1G3_9AGAM/32-122     AC A0A0C9W1G3.1
#=GS C4VAD5_NOSCE/132-242        AC C4VAD5.1
#=GS A0A086T5Q1_ACRC1/2-94       AC A0A086T5Q1.1
#=GS A0A395NYG3_TRIAR/861-956    AC A0A395NYG3.1
#=GS A0A0L7M1C2_PLAF4/1319-1406  AC A0A0L7M1C2.1
#=GS G9MP84_HYPVG/444-564        AC G9MP84.1
#=GS J9IDR5_9SPIT/1-84           AC J9IDR5.1
#=GS A0A0K3CSB2_RHOTO/53-153     AC A0A0K3CSB2.1
#=GS A0A1B9G889_9TREE/208-260    AC A0A1B9G889.1
#=GS J3P0L4_GAET3/776-865        AC J3P0L4.1
#=GS A0A4V3XJ91_9APHY/2-77       AC A0A4V3XJ91.1
#=GS K5W0J6_PHACS/66-150         AC K5W0J6.1
#=GS A0A5C5YC30_9PLAN/240-372    AC A0A5C5YC30.1
#=GS A0A0A2VNN2_BEABA/565-654    AC A0A0A2VNN2.1
#=GS N1RG13_FUSC4/1-68           AC N1RG13.1
#=GS A0A1V2L6R4_CYBFA/141-261    AC A0A1V2L6R4.1
#=GS A0A4Y9YAJ4_9APHY/2-63       AC A0A4Y9YAJ4.1
#=GS A5DCP1_PICGU/25-122         AC A5DCP1.2
#=GS A0A0D2EZK6_9EURO/84-175     AC A0A0D2EZK6.1
#=GS A0A0L0CJV1_LUCCU/1537-1645  AC A0A0L0CJV1.1
#=GS A0A1E5RGN8_9ASCO/611-694    AC A0A1E5RGN8.1
#=GS D6RMZ9_COPC7/438-528        AC D6RMZ9.1
#=GS W2TW00_NECAM/2-91           AC W2TW00.1
#=GS A0A0D1YL06_9EURO/246-306    AC A0A0D1YL06.1
#=GS A0A168QWS2_ABSGL/94-197     AC A0A168QWS2.1
#=GS A0A4U6XQ58_9PEZI/411-482    AC A0A4U6XQ58.1
#=GS A0A395RPU4_FUSSP/190-271    AC A0A395RPU4.1
#=GS A0A7E4VQ46_PANRE/514-600    AC A0A7E4VQ46.1
#=GS A0A7J6IIL8_COLFN/46-145     AC A0A7J6IIL8.1
#=GS A0A284RLN7_ARMOS/8-106      AC A0A284RLN7.1
#=GS A0A1E3IZ87_9TREE/71-156     AC A0A1E3IZ87.1
#=GS A0A2K0WRE3_GIBNY/464-545    AC A0A2K0WRE3.1
#=GS A0A2H3HU16_FUSOX/405-487    AC A0A2H3HU16.1
#=GS A0A672V406_STRHB/211-288    AC A0A672V406.1
#=GS A0A4Q2DWH0_9AGAR/196-279    AC A0A4Q2DWH0.1
#=GS A7APB0_BABBO/267-351        AC A7APB0.1
#=GS A0A5N6KA11_9HELO/459-548    AC A0A5N6KA11.1
#=GS A0A642UUN1_DIURU/289-406    AC A0A642UUN1.1
#=GS T0KU81_COLGC/38-124         AC T0KU81.1
#=GS A0A5B9QNG1_9BACT/350-465    AC A0A5B9QNG1.1
#=GS A0A2G5VI24_9PELO/46-121     AC A0A2G5VI24.1
#=GS A0A0C3DX28_9AGAM/93-180     AC A0A0C3DX28.1
#=GS A0A5N6UZ71_9EURO/388-455    AC A0A5N6UZ71.1
#=GS A0A665U9W5_ECHNA/57-146     AC A0A665U9W5.1
#=GS A0A420SA63_FUSOX/654-741    AC A0A420SA63.1
#=GS K1X5F9_MARBU/615-693        AC K1X5F9.1
#=GS A0A2L2SN75_9HYPO/289-384    AC A0A2L2SN75.1
#=GS W2ZAR0_PHYPR/582-694        AC W2ZAR0.1
#=GS B2W2R3_PYRTR/17-99          AC B2W2R3.1
#=GS A0A162K1T9_CORDF/1-112      AC A0A162K1T9.1
#=GS M4CKZ6_BRARP/286-372        AC M4CKZ6.1
#=GS A0A1Y2VK92_9PEZI/226-343    AC A0A1Y2VK92.1
#=GS A0A0P1BE97_9BASI/515-610    AC A0A0P1BE97.1
#=GS A0A395GJ87_9EURO/61-158     AC A0A395GJ87.1
#=GS A0A1S3RKW2_SALSA/312-418    AC A0A1S3RKW2.1
#=GS A0A139I9C6_9PEZI/492-577    AC A0A139I9C6.1
#=GS A0A6J3M331_9PEZI/173-259    AC A0A6J3M331.1
#=GS F9X9W4_ZYMTI/155-236        AC F9X9W4.1
#=GS A0A2V5HB81_ASPV1/145-246    AC A0A2V5HB81.1
#=GS A0A0V0ZAH1_9BILA/1-83       AC A0A0V0ZAH1.1
#=GS A0A1L9RKK6_ASPWE/49-132     AC A0A1L9RKK6.1
#=GS A0A2T4GN65_FUSCU/271-354    AC A0A2T4GN65.1
#=GS U7PZZ8_SPOS1/91-204         AC U7PZZ8.1
#=GS A0A0C4F3M2_PUCT1/254-339    AC A0A0C4F3M2.1
#=GS A0A2R9B783_PANPA/315-408    AC A0A2R9B783.1
#=GS N4TLV4_FUSC1/185-278        AC N4TLV4.1
#=GS A0A1B9GW88_9TREE/405-486    AC A0A1B9GW88.1
#=GS A0A672YDY8_9TELE/318-420    AC A0A672YDY8.1
#=GS A0A167JQG6_METRR/481-565    AC A0A167JQG6.1
#=GS A0A179HVJ5_PURLI/414-505    AC A0A179HVJ5.1
#=GS A0A0C3F535_PILCF/69-148     AC A0A0C3F535.1
#=GS A0A267EJ56_9PLAT/25-115     AC A0A267EJ56.1
#=GS A0A232F883_9HYME/441-515    AC A0A232F883.1
#=GS A0A0D2QEN6_HYPSF/2-99       AC A0A0D2QEN6.1
#=GS A0A2T4C846_TRILO/164-244    AC A0A2T4C846.1
#=GS A0A395MGW0_9HYPO/95-189     AC A0A395MGW0.1
#=GS A0A0V0UV50_9BILA/426-520    AC A0A0V0UV50.1
#=GS W4JWJ8_HETIT/206-309        AC W4JWJ8.1
#=GS A0A0F7VEB6_PENBI/510-575    AC A0A0F7VEB6.1
#=GS A0A5C3QFH8_9AGAR/1-79       AC A0A5C3QFH8.1
#=GS A0A4U0VT66_9BASI/64-141     AC A0A4U0VT66.1
#=GS A0A5N5QRL7_9AGAM/255-359    AC A0A5N5QRL7.1
#=GS E9DTS2_METAQ/2-99           AC E9DTS2.1
#=GS A0A2P5IEC3_9PEZI/66-163     AC A0A2P5IEC3.1
#=GS K2RKH9_MACPH/234-323        AC K2RKH9.1
#=GS A0A7C8MLW3_9PEZI/446-552    AC A0A7C8MLW3.1
#=GS M3K6P4_CANMX/36-130         AC M3K6P4.1
#=GS A0A4W5NGM8_9TELE/296-378    AC A0A4W5NGM8.1
#=GS A0A1D8PM92_CANAL/113-214    AC A0A1D8PM92.1
#=GS A0A094CI67_9PEZI/1-88       AC A0A094CI67.1
#=GS A0A068Y1A0_ECHMU/1354-1455  AC A0A068Y1A0.1
#=GS A0A2G7FMB2_9EURO/318-411    AC A0A2G7FMB2.1
#=GS G2RFF8_THETT/105-190        AC G2RFF8.1
#=GS A0A5N5QRL7_9AGAM/457-552    AC A0A5N5QRL7.1
#=GS A0A5N6SIC8_ASPPS/401-479    AC A0A5N6SIC8.1
#=GS A0A1L9WW91_ASPA1/124-202    AC A0A1L9WW91.1
#=GS A0A178F856_TRIRU/404-492    AC A0A178F856.1
#=GS A0A0C3QWV4_9AGAM/204-279    AC A0A0C3QWV4.1
#=GS A0A1B8DH47_9PEZI/71-152     AC A0A1B8DH47.1
#=GS U6MSU8_9EIME/52-156         AC U6MSU8.1
#=GS D5GCV8_TUBMM/80-172         AC D5GCV8.1
#=GS A0A4Q2DYM2_9AGAR/209-295    AC A0A4Q2DYM2.1
#=GS A0A2H3HU16_FUSOX/156-283    AC A0A2H3HU16.1
#=GS A0A1C1C6Z6_9EURO/479-564    AC A0A1C1C6Z6.1
#=GS A0A4R0RAP3_9APHY/335-435    AC A0A4R0RAP3.1
#=GS A0A319EMQ2_ASPSB/131-215    AC A0A319EMQ2.1
#=GS A0A179V6H1_BLAGS/55-175     AC A0A179V6H1.1
#=GS A0A512UKE2_9ASCO/578-666    AC A0A512UKE2.1
#=GS A0A165R585_9APHY/513-584    AC A0A165R585.1
#=GS G0V7D9_NAUCC/428-506        AC G0V7D9.1
#=GS A0A2G8SU19_9APHY/2-106      AC A0A2G8SU19.1
#=GS A0A2B7WL54_9EURO/1-65       AC A0A2B7WL54.1
#=GS A0A0V0UV97_9BILA/194-285    AC A0A0V0UV97.1
#=GS A0A1R3S2C9_ASPC5/98-188     AC A0A1R3S2C9.1
#=GS A0A2J6R2W2_9HELO/35-116     AC A0A2J6R2W2.1
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