GenomeNet

Database: Pfam
Entry: PF04872
LinkDB: PF04872
Original site: PF04872 
#=GF ID   Pox_L5
#=GF AC   PF04872.16
#=GF DE   Poxvirus L5 protein family
#=GF AU   Kerrison ND;0000-0002-1471-953X
#=GF SE   Pfam-B_6088 (release 7.6)
#=GF GA   24.00 24.00;
#=GF TC   25.10 24.40;
#=GF NC   22.90 20.90;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 61295632 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   8383392
#=GF RT   Nucleotide sequence analysis of variola virus HindIII M, L, I
#=GF RT   genome fragments. 
#=GF RA   Shchelkunov SN, Blinov VM, Totmenin AV, Marennikova SS,
#=GF RA   Kolykhalov AA, Frolov IV, Chizhikov VE, Gytorov VV, Gashikov PV,
#=GF RA   Belanov EF, et al.; 
#=GF RL   Virus Res 1993;27:25-35.
#=GF DR   INTERPRO; IPR006956;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This family includes variola (smallpox) and vaccinia virus L5
#=GF CC   proteins. However, not all  proteins in this family are called
#=GF CC   L5.  L5 is thought to contain a  metal-binding region [1].
#=GF SQ   37
#=GS Q6TUU9_YMTV5/50-127      AC Q6TUU9.1
#=GS Q6VZH0_CNPV/51-130       AC Q6VZH0.1
#=GS Q9Q912_RFVKA/49-128      AC Q9Q912.1
#=GS Q6TVR9_ORFSA/52-127      AC Q6TVR9.1
#=GS Q9YVW3_MSEPV/74-129      AC Q9YVW3.1
#=GS A0A220T6D2_9POXV/51-129  AC A0A220T6D2.1
#=GS A0A223FMQ9_9POXV/49-127  AC A0A223FMQ9.1
#=GS A0A1V0QGV9_CNPV/52-131   AC A0A1V0QGV9.1
#=GS A0A3F2YKM0_SHEVT/52-131  AC A0A3F2YKM0.1
#=GS L5_FOWPN/49-128          AC P15914.1
#=GS A0A2C9DT40_9POXV/51-119  AC A0A2C9DT40.1
#=GS L5_VARV/50-128           AC P0DOU2.1
#=GS D3IZJ8_9POXV/51-126      AC D3IZJ8.1
#=GS Q0NPB6_9POXV/50-128      AC Q0NPB6.1
#=GS Q070F7_CPRVZ/53-130      AC Q070F7.1
#=GS L5_VAR67/50-128          AC P0DOU1.1
#=GS A0A0M3ZK27_9POXV/49-125  AC A0A0M3ZK27.1
#=GS Q08FS9_DPV83/51-130      AC Q08FS9.1
#=GS Q6TVD7_9POXV/53-128      AC Q6TVD7.1
#=GS A0A3S7SW71_9POXV/51-130  AC A0A3S7SW71.1
#=GS A0A6B9R365_9POXV/49-116  AC A0A6B9R365.1
#=GS A0A068EHQ3_9POXV/49-128  AC A0A068EHQ3.1
#=GS Q775V3_CAMPS/50-128      AC Q775V3.1
#=GS A0A1L3IZH6_9POXV/50-128  AC A0A1L3IZH6.1
#=GS Q5IXU1_MONPV/50-128      AC Q5IXU1.1
#=GS Q9Q8N7_MYXVL/49-128      AC Q9Q8N7.1
#=GS A0A068EEA7_9POXV/49-128  AC A0A068EEA7.1
#=GS G3EIF0_9POXV/49-127      AC G3EIF0.1
#=GS Q98242_MCV1/56-133       AC Q98242.1
#=GS A0A097IVT7_9POXV/50-128  AC A0A097IVT7.1
#=GS Q9DHP9_YLDV/50-127       AC Q9DHP9.1
#=GS Q8V3N3_SWPV1/49-128      AC Q8V3N3.1
#=GS A0A1B1MRH5_9POXV/48-122  AC A0A1B1MRH5.1
#=GS U3UBI0_9POXV/50-128      AC U3UBI0.1
#=GS A0A2U9QHN3_9POXV/57-132  AC A0A2U9QHN3.1
#=GS L5_VACCW/50-128          AC P68623.1
#=GS Q77DT4_CWPXB/50-128      AC Q77DT4.1
Q6TUU9_YMTV5/50-127                 ..............EIIMSFDKVQSIN-NPIDKLK.NTFLFCKEN.KMMIGGLPN.NITTEALSVN.KLPIVIDNCEDILMSING.SHKVSLDDIFRR....
Q6VZH0_CNPV/51-130                  ..............EVLYAFLPLQKPPKNSINSLLdKTFLKCEEN.GSLMIVRP-.SGTYPALNLE.GNPIQISDCSLLLSSLNGrDRSTSPYSIFNR....
Q9Q912_RFVKA/49-128                 ..............EFNMLLRNTVDLENDPIKQFT.STSLVCKGN.ALFIKHMPNlTELKTALAIN.RKQIVHENCEALLQSING.SRKVSLNDILKR....
Q6TVR9_ORFSA/52-127                 ..............ELGALFRRAPRAP-SPLDAYL.QASLVCDGD.ALLI-ELP-.EGRVPALALD.GRPVAFPGCESLLYRING.PRKVRLVDVL--gg..
Q9YVW3_MSEPV/74-129                 ......dieqfnal-------------DNTLQEIV.NSSLYCNGD.NLYY-KYK-.GESRQALALN.NEPIT--DCNNILN----.------------ky..
A0A220T6D2_9POXV/51-129             ..............EILMLLRPKKYKSENYINKLK.SATLICDGN.VLKITGLAN.AKILPALALN.KEPISINECKELLYSING.SRQVSLNDVLR-k...
A0A223FMQ9_9POXV/49-127             ..............EIITFFKSRDDIP-NPVDKLR.TATLVCEGN.KLMINGLTRlGTERSALSLN.SKPIVYKDCLKLLQTING.SRSISFNDVLRR....
A0A1V0QGV9_CNPV/52-131              ..............EILYVFLPLQKTPKNSINSLLdKTFLKCEDD.GSLMIVRP-.SGTYPALNLD.DTPVQFSDCSLLLSSLNGgNRSTSPYSIFNR....
A0A3F2YKM0_SHEVT/52-131             ..............EIKMLFNFKQQKVISPIDKFS.KTTLYCKEN.KLFISGLPNtMYSKEALSLN.RQPITYKYCNDLLQSING.SQQVSINDILR-k...
L5_FOWPN/49-128                     ..............EILYTFFPLAKPSKNSINSLLdRTMLKCEED.GSLMISRP-.SGIYSALSLD.GSPVRISDCSLLLSSINGaSSSTSPYSIFNR....
A0A2C9DT40_9POXV/51-119             ......retfaklt--------RRRPRVDAIAALTsGASLRCTGP.KLMLATRSD.AVPVPALNYD.GSPVEIDDCSSLLRSVNG.P-----------....
L5_VARV/50-128                      ..............ELNMFFMHKRKIP-DPIDRLR.RANLACEDD.KLMIYGLPWiTTQTSALSIN.SKPIVYKDCAKLLRSING.SQPVSLNDVLRR....
D3IZJ8_9POXV/51-126                 ..............ELGALFRRAPRAP-SPLDAYL.QASLVCEGD.ALML-ELP-.EGRLPALALD.GRPIAFPGCAGLLHRING.PRKVRLVDVL--gg..
Q0NPB6_9POXV/50-128                 ..............ELNMFFMPKRKIP-DPIDRLR.RANLACEDD.KLMIYGLPWmTTQTSALSIN.SKPIVYKDCAKLLRSING.SQPVSLNDVLRR....
Q070F7_CPRVZ/53-130                 evryffergapwrr-----------RSVATLDPVR.DAELFCDGP.SLKV-RRD-.GKILQALNYD.GSAITFRDCQGVLTKLNG.SQTVPI------elvf
L5_VAR67/50-128                     ..............ELNMFFMHKRKIP-DPIDRLR.RANLACEDD.KLMIYGLPWiTTQTSALSIN.SKPIVYKDCAKLLRSING.SQPVSLNDVLRR....
A0A0M3ZK27_9POXV/49-125             ..............EILNAFIPVPVPK-NAITNLLnKTTLSCEEN.GTMMIHRE-.SGKYPALNLD.GSPIIIDDCSLVLSSLNG.-RSTSPYAIFNR....
Q08FS9_DPV83/51-130                 ..............EIMMLLNYKNDMVKDPLEKFL.KTSLSCNGD.KLIINKLPNsSSNVNALAIN.RTPITNKNCKALLQSING.SQQVSLNDILRR....
Q6TVD7_9POXV/53-128                 ..............ELRSALRGRQRPP-SPLDAYG.EASLACDGD.ALMI-ELP-.GGRLPALALD.GRPVAFPGCDGVLRRING.TRKVRLVDVLGR....
A0A3S7SW71_9POXV/51-130             ..............EIMMLLNYKNDMVKDPLEKFL.KTSLSCNGD.KLIINKLPNsSSNVNALAIN.RTPITNKNCKDLLQSING.SQQVSLNDILRR....
A0A6B9R365_9POXV/49-116             ..............EIAIFFTPGMTVS-NPLNVVK.QSKLLCKNN.DLYI-KLPN.YKIVSAISLN.GQPISYNKCEELISSLNN.G-----------sq..
A0A068EHQ3_9POXV/49-128             ..............EILYTFFPLAKPPKNSINGLLdRTMLKCEED.GSLTISRP-.SGIYSALSLD.GSPIRIPDCGLLLSSINGtSSSTSPYSIFNR....
Q775V3_CAMPS/50-128                 ..............ELNMFFMPKRKIP-DPIDRLR.RANLACEDD.KLMIYGLPWmTTQTSALSIN.SKPIVYKDCTKLLRSING.SQPVSLNDVLRR....
A0A1L3IZH6_9POXV/50-128             ..............EIKMLFLKDDKND-TIFNTLM.KTSLSCNGN.NLVISGLPN.KSNVNALYIDnKKPIIYDKCNEVLMSING.SHKIHLNDILR-k...
Q5IXU1_MONPV/50-128                 ..............ELNMFFMPKRKIP-DPIDRLR.RANLACEDD.KLMIYGLPWiTTQTSALSIN.SKPIVYKDCAKLLRSING.SQPVSLNDVLRR....
Q9Q8N7_MYXVL/49-128                 ..............EFNMLLRNTVDLANDPIKQFT.STSLTCKGN.ALFIKHMPNsTELKPALAIN.RKQIVHENCAALLQSING.SRKVSLNDILER....
A0A068EEA7_9POXV/49-128             ..............EILYTFFPLAKPPKNSINGLLdRTMLKCEED.GSLMISRP-.SGIYSALSLD.GSPIRIPDCGLLLSSINGaSSSTSPYSVFNR....
G3EIF0_9POXV/49-127                 ..............EILSFLKYREFLP-NPLDRLR.AATLSCEGN.NLNIHGVPIlGTEKSAISLN.SKPIVYKDCLKLLQTING.SRTISFNDVLRR....
Q98242_MCV1/56-133                  ..............ELRAAFSRRPRAPEDPLRQMVaGKRLACAGE.RLMILGLH-.GGPQAALNLD.GSEVRLPNCEAFLRGAGR.ANTDSAGEA---gt..
A0A097IVT7_9POXV/50-128             ..............EIKMLFFND-YINDSMFKTLM.KTSLSCNGN.NLVISGLPN.KNNVNALYIDnKKPIIYDKCNEVLMSING.SHKIYLNDILR-k...
Q9DHP9_YLDV/50-127                  ..............EIILAFNKTKVVN-NPIDKFK.DTFLFCKEN.KMMIGGLPN.NNVTEALTTD.KIPIVVDNCEDILKSING.SHKVSLNDILRR....
Q8V3N3_SWPV1/49-128                 ..............EIIMLISYKDDISINPIDNFS.KSWLSCDGN.KLVINNLPNtNGTKTALAIN.RQDITYKDCNFLLQSING.SSKISLNDVLRR....
A0A1B1MRH5_9POXV/48-122             ..............EIVSMFTPVTPI--NELDKYK.DTYLTCYGN.KLYIISD--.NKQLPALSLN.FKQIEFEGCSTILRNING.SRTVRISDVLNR....
U3UBI0_9POXV/50-128                 ..............ELGSVFSRAASAP-DPLERFR.KARLECAADgGLMIAGLG-.ARPRPALAGD.GRPIRPADCAAVLRSVNNgPLAVSLDDVLR-g...
A0A2U9QHN3_9POXV/57-132             .......ecrwllt--------KYEPSINPLIKYK.DNYLTCFKN.KLYV--VDN.GAYVPALSLN.GKHIVTNNCENILHNLNE.SQPVRVFDVFSR....
L5_VACCW/50-128                     ..............ELNMFFMPKRKIP-DPIDRLR.RANLACEDD.KLMIYGLPWmTTQTSALSIN.SKPIVYKDCAKLLRSING.SQPVSLNDVLRR....
Q77DT4_CWPXB/50-128                 ..............ELNMFFMPKRKIP-DPIDRLR.RANLACEDD.KLMIYGLPWmTTQTSALSIN.SKPIVYKDCTKLLRSING.SQPVSLNDVLRR....
#=GC seq_cons                       ..............ElhhhFh.ptchs.sPlcplt.cssLsCcss.pLhIhsLP..ssphsALuls.upPIshccCstLLpSING.SpplSlsDlLpR....
//
DBGET integrated database retrieval system