#=GF ID PG_binding_1
#=GF AC PF01471.22
#=GF DE Putative peptidoglycan binding domain
#=GF AU Bateman A;0000-0002-6982-4660
#=GF SE Pfam-B_2277 (release 4.0)
#=GF GA 23.00 23.00;
#=GF TC 23.00 23.00;
#=GF NC 22.90 22.90;
#=GF BM hmmbuild HMM.ann SEED.ann
#=GF SM hmmsearch -E 1000 -Z 75585367 --cpu 4 HMM pfamseq
#=GF TP Domain
#=GF WK Peptidoglycan_binding_domain
#=GF CL CL0244
#=GF RC This paper gives the crystal structure for this domain. However
#=GF RC no function is given for this domain.
#=GF RN [1]
#=GF RM 7121588
#=GF RT Structure of a Zn2+-containing D-alanyl-D-alanine-cleaving
#=GF RT carboxypeptidase at 2.5 A resolution.
#=GF RA Dideberg O, Charlier P, Dive G, Joris B, Frere JM, Ghuysen JM;
#=GF RL Nature 1982;299:469-470.
#=GF RN [2]
#=GF RM 1683402
#=GF RT Cloning, expression, sequence analysis and biochemical
#=GF RT characterization of an autolytic amidase of Bacillus subtilis
#=GF RT 168 trpC2.
#=GF RA Foster SJ;
#=GF RL J Gen Microbiol 1991;137:1987-1998.
#=GF RN [3]
#=GF RM 7656014
#=GF RT The NMR structure of the inhibited catalytic domain of human
#=GF RT stromelysin-1.
#=GF RA Gooley PR, O'Connell JF, Marcy AI, Cuca GC, Salowe SP, Bush BL,
#=GF RA Hermes JD, Esser CK, Hagmann WK, Springer JP, et al;
#=GF RL Nat Struct Biol 1994;1:111-118.
#=GF RN [4]
#=GF RM 17697255
#=GF RT Muralytic activity and modular structure of the endolysins of
#=GF RT Pseudomonas aeruginosa bacteriophages phiKZ and EL.
#=GF RA Briers Y, Volckaert G, Cornelissen A, Lagaert S, Michiels CW,
#=GF RA Hertveldt K, Lavigne R;
#=GF RL Mol Microbiol. 2007;65:1334-1344.
#=GF DR INTERPRO; IPR002477;
#=GF DR MEROPS; M15;
#=GF DR SCOP; 1lbu; fa;
#=GF DR SO; 0000417; polypeptide_domain;
#=GF CC This domain is composed of three alpha helices [1]. This domain
#=GF CC is found at the N or C terminus of a variety of enzymes involved
#=GF CC in bacterial cell wall degradation [2]. This domain may have a
#=GF CC general peptidoglycan binding function. This family is found
#=GF CC N-terminal to the catalytic domain of matrixins [3]. The domain
#=GF CC is found to bind peptidoglycan experimentally [4].
#=GF SQ 43138
#=GS A0A087WZS5_HUMAN/25-85 AC A0A087WZS5.1
#=GS A0A0L0QRG4_VIRPA/57-112 AC A0A0L0QRG4.1
#=GS A0A1U7QJQ9_MESAU/44-104 AC A0A1U7QJQ9.1
#=GS A0A3Q1CIF4_AMPOC/1-52 AC A0A3Q1CIF4.1
#=GS A0A429USD7_9ACTN/457-513 AC A0A429USD7.1
#=GS R7AG40_9FIRM/187-249 AC R7AG40.1
#=GS A0A1Y5XVY8_KIBAR/137-181 AC A0A1Y5XVY8.1
#=GS A0A1W2A1M2_9SPHI/9-64 AC A0A1W2A1M2.1
#=GS A0A428N571_9BACI/42-98 AC A0A428N571.1
#=GS Q0F2Z5_9PROT/68-130 AC Q0F2Z5.1
#=GS A0A2F0AUI3_ESCRO/32-91 AC A0A2F0AUI3.1
#=GS A0A346NHZ9_9ALTE/338-394 AC A0A346NHZ9.1
#=GS D3ZXJ0_RAT/44-104 AC D3ZXJ0.1
#=GS A0A6P8VQ62_GYMAC/35-83 AC A0A6P8VQ62.1
#=GS A0A8J2V1X9_9PROT/463-511 AC A0A8J2V1X9.1
#=GS A0A4R6P633_NOCIG/9-70 AC A0A4R6P633.1
#=GS A0A7L4NHQ2_9AVES/1-53 AC A0A7L4NHQ2.1
#=GS A0A850R093_9LACO/387-442 AC A0A850R093.1
#=GS A0A084H2B7_METID/71-127 AC A0A084H2B7.1
#=GS A3K5E1_9RHOB/276-332 AC A3K5E1.1
#=GS A0A6J1TAP8_FRAOC/6-37 AC A0A6J1TAP8.1
#=GS A0A6A5EIJ3_PERFL/21-80 AC A0A6A5EIJ3.1
#=GS A0A1T4LQU1_9FIRM/34-90 AC A0A1T4LQU1.1
#=GS Q1QP68_NITHX/422-478 AC Q1QP68.1
#=GS A0A1T5IUZ9_9CLOT/98-154 AC A0A1T5IUZ9.1
#=GS A0A2B8AZ13_9ACTN/539-603 AC A0A2B8AZ13.1
#=GS A0A2S5GE47_9BACL/420-476 AC A0A2S5GE47.1
#=GS A0A5E4C454_MARMO/5-37 AC A0A5E4C454.1
#=GS A0A8C4UDL3_FALTI/37-96 AC A0A8C4UDL3.1
#=GS A0A2A2SB75_9SPHN/124-168 AC A0A2A2SB75.1
#=GS A0A7W8U9K6_9HYPH/371-424 AC A0A7W8U9K6.1
#=GS A0A7X3SQ00_9HYPH/341-397 AC A0A7X3SQ00.1
#=GS A0A542LR72_9BURK/206-261 AC A0A542LR72.1
#=GS A0A852J8M9_9PICI/28-80 AC A0A852J8M9.1
#=GS A0A0F5FE28_9HYPH/225-279 AC A0A0F5FE28.1
#=GS A0A364RGC2_9BACT/240-298 AC A0A364RGC2.1
#=GS A0A673MR45_9TELE/26-87 AC A0A673MR45.1
#=GS A0A2T5BED7_MYCDI/377-432 AC A0A2T5BED7.1
#=GS A0A222F110_9HYPH/360-399 AC A0A222F110.1
#=GS A0A6P5L4U8_PHACI/58-111 AC A0A6P5L4U8.1
#=GS A0A5C8WMU8_9HYPH/2-57 AC A0A5C8WMU8.1
#=GS A0A7K6MUA9_PANBI/27-87 AC A0A7K6MUA9.1
#=GS A0A672L6C5_SINGR/49-103 AC A0A672L6C5.1
#=GS A0A261QGR1_9BACI/45-101 AC A0A261QGR1.1
#=GS A0A2P5BSJ7_TREOI/29-96 AC A0A2P5BSJ7.1
#=GS A0A851M5L9_9DEND/37-95 AC A0A851M5L9.1
#=GS Q6N403_RHOPA/187-243 AC Q6N403.1
#=GS A0A0R0CFE5_9GAMM/334-391 AC A0A0R0CFE5.1
#=GS M3WNA6_FELCA/27-87 AC M3WNA6.1
#=GS A0A7W6GEC4_9HYPH/170-224 AC A0A7W6GEC4.1
#=GS A0A6V8LAW1_9ACTN/135-191 AC A0A6V8LAW1.1
#=GS A0A2U9C1H3_SCOMX/23-83 AC A0A2U9C1H3.1
#=GS A0A091FIB4_CORBR/27-86 AC A0A091FIB4.1
#=GS A0A3Q7ICX7_SOLLC/55-115 AC A0A3Q7ICX7.1
#=GS A0A1C5GDT3_MICEH/266-321 AC A0A1C5GDT3.1
#=GS A0A4R8RAJ3_9MYCO/100-156 AC A0A4R8RAJ3.1
#=GS A0A6N9YKH8_9ACTN/90-146 AC A0A6N9YKH8.1
#=GS Q8P5X3_XANCP/50-101 AC Q8P5X3.1
#=GS A0A366I2B9_9FIRM/224-275 AC A0A366I2B9.1
#=GS A0A6A2WU66_HIBSY/48-109 AC A0A6A2WU66.1
#=GS A0A6I6IQH7_9RHOB/332-388 AC A0A6I6IQH7.1
#=GS A0A671KSX3_9TELE/27-88 AC A0A671KSX3.1
#=GS Q8CJS8_STRCO/251-295 AC Q8CJS8.1
#=GS A0A834J1E8_VESVU/74-130 AC A0A834J1E8.1
#=GS A0A1W2BUX1_9FIRM/142-198 AC A0A1W2BUX1.1
#=GS A0A7W8ABM2_9ACTN/234-289 AC A0A7W8ABM2.1
#=GS A0A6B2U4P0_9ACTN/45-100 AC A0A6B2U4P0.1
#=GS G5F363_9ACTN/88-144 AC G5F363.1
#=GS A0A314U6Y0_PRUYE/56-111 AC A0A314U6Y0.1
#=GS B4WLP6_SYNS7/51-104 AC B4WLP6.1
#=GS A0A396PWT6_9CLOT/291-348 AC A0A396PWT6.1
#=GS A0A6P9B1L3_PANGU/33-91 AC A0A6P9B1L3.1
#=GS Q1RM69_DANRE/26-85 AC Q1RM69.1
#=GS A0A8J3VS72_9ACTN/101-147 AC A0A8J3VS72.1
#=GS A0A0L0KN29_9ACTN/63-121 AC A0A0L0KN29.1
#=GS A0A7K4PIU9_MELMO/44-81 AC A0A7K4PIU9.1
#=GS A0A2U8QV23_9FLAO/218-275 AC A0A2U8QV23.1
#=GS A0A1H9HLA4_9HYPH/103-161 AC A0A1H9HLA4.1
#=GS A0A8C7KN65_ONCKI/33-92 AC A0A8C7KN65.1
#=GS A0A369R351_9RHOB/351-407 AC A0A369R351.1
#=GS D8FUR3_9CYAN/63-118 AC D8FUR3.1
#=GS A0A3L8Q1M5_9GAMM/335-391 AC A0A3L8Q1M5.1
#=GS A0A2V2Z1T4_9BACL/48-105 AC A0A2V2Z1T4.1
#=GS A0A6P5IA65_PHACI/9-61 AC A0A6P5IA65.1
#=GS A0A1I5XJB0_9FIRM/42-99 AC A0A1I5XJB0.1
#=GS A0A5C5UD71_9CORY/97-153 AC A0A5C5UD71.1
#=GS K9R9Z1_9CYAN/15-71 AC K9R9Z1.1
#=GS A0A6L8UYY0_9BACL/42-98 AC A0A6L8UYY0.1
#=GS A0A292E4E4_9HYPH/293-348 AC A0A292E4E4.1
#=GS A0A7N6FFX8_ANATE/3-57 AC A0A7N6FFX8.1
#=GS A0A2X0IS07_9ACTN/566-624 AC A0A2X0IS07.1
#=GS A0A1M5SP77_9RHOB/489-545 AC A0A1M5SP77.1
#=GS A0A3P1WMJ2_9ACTN/180-236 AC A0A3P1WMJ2.1
#=GS A0A5N5K8T6_9ROSI/60-119 AC A0A5N5K8T6.1
#=GS A0A839ACL2_9HYPH/93-151 AC A0A839ACL2.1
#=GS A0A542ZTB1_9ACTN/266-321 AC A0A542ZTB1.1
#=GS A0A4Y6IBH0_9GAMM/481-537 AC A0A4Y6IBH0.1
#=GS D1C0H2_XYLCX/127-175 AC D1C0H2.1
#=GS A0A318TAW5_9BRAD/356-410 AC A0A318TAW5.1
#=GS E3GHC6_9FIRM/72-128 AC E3GHC6.1
#=GS A0A6J0VA57_9SAUR/27-79 AC A0A6J0VA57.1
#=GS B8IU48_METNO/339-395 AC B8IU48.1
#=GS A0A1B1MG35_STRLN/80-136 AC A0A1B1MG35.1
#=GS H1WM10_9CYAN/110-164 AC H1WM10.1
#=GS A0A1X6XEX8_9MICO/310-364 AC A0A1X6XEX8.1
#=GS Q0RAY3_FRAAA/194-263 AC Q0RAY3.1
#=GS A0A1H3HQ98_9PSEU/109-162 AC A0A1H3HQ98.1
#=GS A0A1G9MF69_9ACTN/181-239 AC A0A1G9MF69.1
#=GS A0A4U8URV2_STECR/39-90 AC A0A4U8URV2.1
#=GS A0A1H9WNY0_9BACI/226-282 AC A0A1H9WNY0.1
#=GS A0A4W3HD32_CALMI/2-34 AC A0A4W3HD32.1
#=GS A0A2Z4Q5M5_9CAUD/143-198 AC A0A2Z4Q5M5.1
#=GS A0A7L1LMV1_HIMHI/1-54 AC A0A7L1LMV1.1
#=GS A0A1P8UZL6_9RHOB/202-258 AC A0A1P8UZL6.1
#=GS A0A6C7E516_ILUCY/413-470 AC A0A6C7E516.1
#=GS A0A4S8N0A0_9ACTN/527-583 AC A0A4S8N0A0.1
#=GS A0A345C003_9BACI/831-889 AC A0A345C003.1
#=GS A0A240U1L3_9BURK/367-423 AC A0A240U1L3.1
#=GS A0A6M1MIH9_9RHOB/353-409 AC A0A6M1MIH9.1
#=GS A0A4W5RU92_9TELE/42-101 AC A0A4W5RU92.1
#=GS Q0ATF7_MARMM/232-284 AC Q0ATF7.1
#=GS A0A1E5T2U5_9BACT/109-164 AC A0A1E5T2U5.1
#=GS A0A7X3CTA7_9BACL/46-94 AC A0A7X3CTA7.1
#=GS A0A5N4DEA0_CAMDR/25-81 AC A0A5N4DEA0.1
#=GS A0A078IR95_BRANA/175-234 AC A0A078IR95.1
#=GS A0A7T5JGI7_9CYAN/225-283 AC A0A7T5JGI7.1
#=GS D5ALS2_RHOCB/132-176 AC D5ALS2.1
#=GS A0A563EZ77_9PSEU/89-145 AC A0A563EZ77.1
#=GS A0A8B6ZM49_ORYAF/48-106 AC A0A8B6ZM49.1
#=GS A0A4Y9AA72_9BACI/483-541 AC A0A4Y9AA72.1
#=GS A0A3Q4G3X7_NEOBR/30-84 AC A0A3Q4G3X7.1
#=GS A0A0J1GMP9_9GAMM/247-300 AC A0A0J1GMP9.1
#=GS A0A653TP35_9FLAO/9-64 AC A0A653TP35.1
#=GS A0A8D2JDU2_VARKO/60-86 AC A0A8D2JDU2.1
#=GS A0A8C6Z4I8_NOTPE/32-84 AC A0A8C6Z4I8.1
#=GS A0A3M6TPP5_POCDA/345-393 AC A0A3M6TPP5.1
#=GS C7MH16_BRAFD/64-120 AC C7MH16.1
#=GS A0A2T0VP71_9GAMM/213-281 AC A0A2T0VP71.1
#=GS A0A7W6CXV4_9HYPH/108-164 AC A0A7W6CXV4.1
#=GS A0A177PKT3_9HYPH/167-222 AC A0A177PKT3.1
#=GS A0A1I4J7M4_9ACTN/15-80 AC A0A1I4J7M4.1
#=GS A0A089L4U0_9BACL/398-454 AC A0A089L4U0.1
#=GS A0A370GCU5_9BACI/404-460 AC A0A370GCU5.1
#=GS B1KG27_SHEWM/9-65 AC B1KG27.1
#=GS V7C6E0_PHAVU/61-121 AC V7C6E0.1
#=GS A0A8C2X5Q8_CYCLU/36-68 AC A0A8C2X5Q8.1
#=GS A0A315D9T9_9BURK/350-406 AC A0A315D9T9.1
#=GS A0A4R5F0L0_9RHOB/167-220 AC A0A4R5F0L0.1
#=GS A0A0U4GYW3_9MICO/205-264 AC A0A0U4GYW3.1
#=GS A0A6J0B4K0_VICPA/25-81 AC A0A6J0B4K0.1
#=GS D5DPM4_PRIM1/54-109 AC D5DPM4.1
#=GS A0A8D2ISV5_UROPR/14-74 AC A0A8D2ISV5.1
#=GS A0A1H0CEP0_ALLAB/45-100 AC A0A1H0CEP0.1
#=GS A0A7Y7DN69_9ALTE/110-135 AC A0A7Y7DN69.1
#=GS A0A845MAZ5_9RHOB/169-225 AC A0A845MAZ5.1
#=GS A0A0J6CVT7_9BACI/198-256 AC A0A0J6CVT7.1
#=GS A0A1A2FS46_9MYCO/104-160 AC A0A1A2FS46.1
#=GS A0A1C5IAI4_9ACTN/145-200 AC A0A1C5IAI4.1
#=GS A0A6I8NPS8_ORNAN/35-84 AC A0A6I8NPS8.1
#=GS A0A1I6LK95_9BACT/240-297 AC A0A1I6LK95.1
#=GS D6K2N0_9ACTN/470-514 AC D6K2N0.1
#=GS A0A7K5ZQH3_ONYCO/30-89 AC A0A7K5ZQH3.1
#=GS A0A7L1XE47_9AVES/27-87 AC A0A7L1XE47.1
#=GS A0A1I4C867_9HYPH/184-240 AC A0A1I4C867.1
#=GS A0A6A7MHH3_9PROT/176-232 AC A0A6A7MHH3.1
#=GS A0A316TUU2_9BACT/8-66 AC A0A316TUU2.1
#=GS A0A4W3I6G6_CALMI/126-154 AC A0A4W3I6G6.1
#=GS A0A1M6IRV1_9CLOT/344-400 AC A0A1M6IRV1.1
#=GS A0A021XG15_9HYPH/362-417 AC A0A021XG15.1
#=GS A0A672R6B0_SINGR/27-80 AC A0A672R6B0.1
#=GS A0A671N9D7_9TELE/1-53 AC A0A671N9D7.1
#=GS A0A8C3AKZ6_CYCLU/1-28 AC A0A8C3AKZ6.1
#=GS A0A5F5XUG9_FELCA/12-69 AC A0A5F5XUG9.1
#=GS A0A1Y0RBQ1_9CYAN/101-157 AC A0A1Y0RBQ1.1
#=GS A0A4Z0GKM2_9BACL/399-455 AC A0A4Z0GKM2.1
#=GS A0A151P7E4_ALLMI/4-58 AC A0A151P7E4.1
#=GS A0A7L2Y1A5_9PASS/27-86 AC A0A7L2Y1A5.1
#=GS A0A6A7K8V9_9FIRM/222-273 AC A0A6A7K8V9.1
#=GS A0A3S0I999_9BACL/401-457 AC A0A3S0I999.1
#=GS A0A0U1P0G5_9BACI/433-490 AC A0A0U1P0G5.1
#=GS A0A2M8TES6_9CLOT/276-324 AC A0A2M8TES6.1
#=GS A0A085ES05_9HYPH/346-402 AC A0A085ES05.1
#=GS A0A4R7J1N3_9ACTN/122-171 AC A0A4R7J1N3.1
#=GS A0A7L0NIY1_9PASS/37-95 AC A0A7L0NIY1.1
#=GS A0A142ELW0_9BACT/228-287 AC A0A142ELW0.1
#=GS A0A5B8B8Q1_9HYPH/104-159 AC A0A5B8B8Q1.1
#=GS A0A2P7RXD5_9HYPH/1192-1247 AC A0A2P7RXD5.1
#=GS S9S0Z9_9RHOB/313-369 AC S9S0Z9.1
#=GS A0A0M4FR10_9BACI/208-266 AC A0A0M4FR10.1
#=GS A0A1X7MZ69_9HYPH/91-144 AC A0A1X7MZ69.1
#=GS A0A8C1B5T9_CYPCA/3-35 AC A0A8C1B5T9.1
#=GS A7II80_XANP2/247-308 AC A7II80.1
#=GS A0A091VNW8_OPIHO/2-57 AC A0A091VNW8.1
#=GS A0A844WHA9_9RHOB/347-403 AC A0A844WHA9.1
#=GS A0A6C0RTQ9_9CAUD/261-316 AC A0A6C0RTQ9.1
#=GS A0A101TV11_9ACTN/387-445 AC A0A101TV11.1
#=GS A0A7J8HJH3_MOLMO/71-130 AC A0A7J8HJH3.1
#=GS A0A1Q9VG91_9PSEU/191-246 AC A0A1Q9VG91.1
#=GS A0A086F4B6_CHRP1/277-331 AC A0A086F4B6.1
#=GS A0A834YLW0_9MAGN/324-390 AC A0A834YLW0.1
#=GS A0A7W6EGK6_9HYPH/394-450 AC A0A7W6EGK6.1
#=GS A0A7W5FEN7_9ACTN/292-346 AC A0A7W5FEN7.1
#=GS A0A851XB15_EOLRO/15-69 AC A0A851XB15.1
#=GS A0A1X4G342_9CYAN/143-198 AC A0A1X4G342.1
#=GS A0A6P1APV5_9BACT/296-352 AC A0A6P1APV5.1
#=GS A0A7K4QKA0_9TYRA/1-54 AC A0A7K4QKA0.1
#=GS A0A543HZW5_9MICO/382-433 AC A0A543HZW5.1
#=GS A0A0T7C0G0_9CYAN/131-187 AC A0A0T7C0G0.1
#=GS A0A7W9MFH1_9ACTN/67-123 AC A0A7W9MFH1.1
#=GS A0A8C9DIX1_PROSS/26-86 AC A0A8C9DIX1.1
#=GS A0A674AD15_SALTR/25-76 AC A0A674AD15.1
#=GS A0A7J9JUP9_9ROSI/58-117 AC A0A7J9JUP9.1
#=GS A0A4W6DAS4_LATCA/32-84 AC A0A4W6DAS4.1
#=GS A0A6G8ANB9_9ENTE/405-461 AC A0A6G8ANB9.1
#=GS A0A327JGP6_9HYPH/214-277 AC A0A327JGP6.1
#=GS A0A6M0HLN1_9HYPH/325-381 AC A0A6M0HLN1.1
#=GS R9KTG2_9FIRM/83-144 AC R9KTG2.1
#=GS A0A3Q4HZN1_NEOBR/11-65 AC A0A3Q4HZN1.1
#=GS A0A1M5MYT7_9RHOB/153-209 AC A0A1M5MYT7.1
#=GS A0A6M0Q4U7_9BACI/29-86 AC A0A6M0Q4U7.1
#=GS W6W5W6_RHIS8/1247-1302 AC W6W5W6.1
#=GS A0A6G7ZDD1_9FIRM/416-468 AC A0A6G7ZDD1.1
#=GS A0A2T0TJI8_9PSEU/87-143 AC A0A2T0TJI8.1
#=GS A0A2K6EH01_PROCO/26-86 AC A0A2K6EH01.1
#=GS A0A150WJZ2_BDEBC/177-232 AC A0A150WJZ2.1
#=GS A0A0Q4XK25_9HYPH/149-207 AC A0A0Q4XK25.1
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