GenomeNet

Database: Pfam
Entry: PM0294_M
LinkDB: PM0294_M
Original site: PM0294_M 
#=GF ID   PM0294_M
#=GF AC   PF27496.1
#=GF DE   PM0294 middle domain
#=GF AU   Morveli N;0000-0003-2496-881X
#=GF AU   Bateman A;0000-0002-6982-4660
#=GF SE   TED:Q9CNX7_TED02
#=GF GA   27.00 27.00;
#=GF TC   30.10 79.90;
#=GF NC   24.00 19.50;
#=GF BM   hmmbuild  HMM.ann SEED.ann
#=GF SM   hmmsearch -E 1000 -Z 90746521 --cpu 8 HMM pfamseq
#=GF TP   Domain
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   This entry represents the middle domain of PM0294, an
#=GF CC   uncharacterised protein from Pasteurella multocida. PM0294 is
#=GF CC   423 amino acids in length. This domain is found predominantly in
#=GF CC   Bacteroidota, particularly within Flavobacteriia and
#=GF CC   Sphingobacteriia. The function of this middle domain remains to
#=GF CC   be determined.
#=GF SQ   20
#=GS A0A1G8D6S4_9FLAO/120-277  AC A0A1G8D6S4.1
#=GS A0A6M1TBD6_9BACT/121-280  AC A0A6M1TBD6.1
#=GS A0A1I3LHR0_9FLAO/117-276  AC A0A1I3LHR0.1
#=GS A0A1G8GLG5_9FLAO/133-296  AC A0A1G8GLG5.1
#=GS A0A1V3MT32_9SPHI/110-270  AC A0A1V3MT32.1
#=GS A0AA43RU46_9BACT/112-270  AC A0AA43RU46.1
#=GS T2KNB5_FORAG/125-284      AC T2KNB5.1
#=GS A0A176TA57_9FLAO/126-285  AC A0A176TA57.1
#=GS Y294_PASMU/122-276        AC Q9CNX7.1
#=GS A0A1X7JSN9_9SPHI/103-262  AC A0A1X7JSN9.1
#=GS D7VSY9_SPHSI/110-270      AC D7VSY9.1
#=GS F9YUH8_CAPCC/5-158        AC F9YUH8.1
#=GS A0A088EYS8_9SPHI/95-254   AC A0A088EYS8.1
#=GS A0A0B7I7A2_9FLAO/5-161    AC A0A0B7I7A2.1
#=GS A0A090VJI6_9FLAO/126-263  AC A0A090VJI6.1
#=GS A0A6N4STJ6_CYTH3/122-280  AC A0A6N4STJ6.1
#=GS A0A0B7H9K6_9FLAO/5-161    AC A0A0B7H9K6.1
#=GS F9YUI0_CAPCC/4-165        AC F9YUI0.1
#=GS A0A085BBN5_9FLAO/121-280  AC A0A085BBN5.1
#=GS A0A378RIP3_MYROD/103-262  AC A0A378RIP3.1
A0A1G8D6S4_9FLAO/120-277             .e-LVTGGQN.DYIKGFEIIAPTPCFVPWTTTKSELLNNPHTR.LEN...G-----....YLNIVYPVRIGNIILRDFGAYVDN.IRPEIALEEYYAKCYATDGSDKSLYLVKEQLERDLADKAEFTFYSDFNLFFYAkigpitfeatYSIDDnEMRNIAYSFTS------------------fsarlqfdyp.......
A0A6M1TBD6_9BACT/121-280             ..KILDSNFN.DYDQGFELLSTQPEFILWDTTYEELRSNPNTY.FEE...SPYDQT....LLKFRYPVRVGNIQLMNLRAYFNN.ARTDVPVLHFHTHCRDKSCSDTSYYELKKQLTQDFLPKQQNLRYERVDQNNFC..........FDANN.MLLSLVYTYDSDWQFDRGYTSFSIRNQRE.................
A0A1I3LHR0_9FLAO/117-276             .g-LLENFDG.DYRKGFEVLYNPPIFVSWDTTYEEFKKLNIGH.TYI...DEFEST....YFRIDYPVRIGSMTVERLEFYYEF.GRENIAVQSYFASLYNENNTDKSYCELRDLWMKSIPVKIEEVGFEREDQKYVS..........FDMDS.VYLSICYTYDSEFSYDDGSTSLMIDNRRD.................
A0A1G8GLG5_9FLAO/133-296             ..TILESKTScDILKGYEIQNSQKTFISWDTTYDEVIKLKEIE.TCK...LDNEDDl..vKYTFTIPVRVGDVILNNFSFY-DC.LRKNIAVGSYFSYCENSDPYNKPYTELKNLLLSYKELNSLKLNKTEENEYISSt........tIQTEH.QEFYLSNAYPASLDAGNMKVFFLVTNLKE.................
A0A1V3MT32_9SPHI/110-270             ..KILSGDFD.DDHSGFEIYSEPKLFISWDITYADIEKLGIGQ.QYA...SEYGTI....YFKIHYPVRIGNLWLKELEIYYDD.VPLHIPIQEYFTTIYDESNTDRSYKDLRDLWLNGEDYDAEDYGYEREDQCYLS..........FDFGSqISSSICYTYEDENNYDDGGTSLHFYNQRD.................
A0AA43RU46_9BACT/112-270             ..QILDHFTPgDYEKGLEIQSPEKEFISWDATYDELRQHPLVK.IIH...GEYSE-....YITFRYPVRIGRLLIWNLKSIVYE.-RTDVAVRWYTTDCYNKEATDGSFRDLYTTMLTDLGREGLKYEREYEDERRAD..........FECSS.MRLSLCYKYDGDYTLEKGFTDLRIENMRE.................
T2KNB5_FORAG/125-284                 ..SILDTNYT.DYNLGFEIQSEEKVFISWDDTYVDLNEHEHTF.IDV...SPYGQK....ILKFKYPIRIGNVILNNFTAYFDN.ARTDIPVLHYYTHAINASSSDTSYYELKTRLQSDFSNDNQFFGYEREDQNSFS..........FRAND.IVFSLVYTYDSTYQFNGGYTSFSVKNERE.................
A0A176TA57_9FLAO/126-285             ..EILNSNNI.DYNLGFEIQSNPKQFISWDTTYEELEKNKNTL.FEK...SPYEQK....LLKFNAPVRIGNILLKDFSAYFDN.DRNDVPVLHYYTHCFNNIANDKSYIQLKKVLNTDLTTGKMNNGYERADQKNIN..........FNLKG.MQLSICYTYDSDWLFNCGYTSLSIENKRE.................
Y294_PASMU/122-276                   .v-ILDEAYT.DYTQGFEIQSPEKIFIPWGTTYESL-------.FQQ...TQFKEKg..iTYGFIFPIRIGRLLLKDV--WIKPsVRKDVPILALYTECYHESATEKSYQELTSILSEHKPLIRSYIEDHSDPKLYQS.........vLRLNT.TEFELRYYRHIRDDFDRGYTKFSIRDTTD.................
A0A1X7JSN9_9SPHI/103-262             ..QILREYDN.NTDLGYEVYTEPKRTITWDTTYEELEASGLVE.GYF...SDYGTK....YLRFKHPVRIEGVLINQLELYVDN.VLPNRPIMEYFVDLYDETNTDKSYKELRELWIDE-GVDIDQYGYERSDQCYLR..........FEFTDgIDALICYTYDEESGYDDGSTSLHFYNVRE.................
D7VSY9_SPHSI/110-270                 .s-ILQQGDVaDYTDGFEVMTSAPLFVSWDTSYDELATLNVGH.LEK...SDYDIR....IFVFDYPVRIGNMVVEGLEAYYDN.ERTDIAVQHYICALYNETHTDTSYYEIKAEWMQHIPIDVDVCGYERDDQKHLT..........FDIED.VWLSISYTYDTEEGYDDGSTSLSMQNKR-s................
F9YUH8_CAPCC/5-158                   .l-LLSENHT.DYHLGFEVQSPEPRFFSWDTTYEEVIASPLVE.WDSpfdLDYEVY...eYYYFKYPVRVGNLLFSKFEFRIHNtQRRDIAVREYYAN-GDRQVEEFDFWQVHQQLEKHLSLHEHY---KTREDLYSF..........FQKDE.MTFLSVYYGEPEH----------------qyvffniin........
A0A088EYS8_9SPHI/95-254              ..EILPTVHN.DFSKGFEVLSQPAKFISWDTTYHEFPTLNIGH.IYA...SEFGSN....YFKIDYPVRIGSMIIQDLEFYYDN.DQKNIAVQAYFTSLYSSTNTDDSYKEIRDLWMKEIPTDIEDFGYERADQSYVR..........FDMND.MQLTLSYTYVAANGYDDGSTTLGIDNFRD.................
A0A0B7I7A2_9FLAO/5-161               .l-LLSENHT.DYHLGFEVQSPKPNFFSWDATYEEVIASPLVE.WDSpfdLDYEVY...eYYYFKYPVRVGNLLFSKFEFRIHNtQRRDIAVREYYAN-GDTQVEEFDFWQVHQQLEKHLPLNEHY---KTREDLYSF..........FQKDG.MTFLSVYYGEP------------------qhqyvffniinark...
A0A090VJI6_9FLAO/126-263             ..QILATGYN.DYADGFEIQSPRKQFINWNTTYSELEKSEHVF.FQK...SPYNQS....ILKFKYPIRIGNILLNDFGSYFDN.KRKDVAVLNFYTHCFDNQGTDRSYNDLKEILKRDLTWIIKIMVMKETIKKTST..........-----.-----------------------------svlkeliclfai.....
A0A6N4STJ6_CYTH3/122-280             di--L-TGFT.DYSEGFEIQSPEKEFVSWDTTYEELAKNPYVR.FKQ...SPYIQK....ISKFAYPIRLGNILLRNFHVYYDQ.MREDVSVLQFYSDCFDALGTDKSYDDLKRILLKDLGIDRNRFNYEREDQKNLN..........YNFGG.MSLSICYTYDSKWNFDGGYTALSVENKRD.................
A0A0B7H9K6_9FLAO/5-161               .l-LLSKNHT.DYHLGFEVQSPEPKFFSWDATYEEVIASPLVE.WDSpfdLDYEVY...eYYYFKYPVRMGNLLFSKFEFRIHNtQRRDIAVREYYAY-GDRQVEEFDFWQVHQQLEKHLSLDEHYEAYE---NLYSF..........FQKDE.MTFLSIYY---------------------gepqhqyvffniinark
F9YUI0_CAPCC/4-165                   .i-ILLQNHT.DYHLGFEVQSPEPKFFSWDATYEEVIASPWVKqIFY...KDYGEGqlsrQFAFKFPVRVGNLLFYNFEFGFTSrQRTDIAVREYRFT-SKKGASKHDFLQICEQFNKDLSHSE---VDEYLENLYYN..........NHTDD.ISFRMQYYGEARH----------------qdfflsiyntrdyyqi.
A0A085BBN5_9FLAO/121-280             ..ELLNGNFN.DYEKGFEIQSPKKQFITWDATYRDLEKNENIS.FEK...SPYGQK....IAKIKFPVRIGNIILKDFRSYFDN.SRTDSPILHFYSQCFDKNGTDQSYFDLKRVLMNDIKMEENRLSYERSDQKNCN..........FHFNG.MNLSICYTYDSDWQFNAGYTSLTIENKRN.................
A0A378RIP3_MYROD/103-262             ..QLLEEYLN.DGDLGYEVYTTPKQMISWDTTYEQLEASGVVE.AYF...TEYGSK....YLRFKHAVRVEGVLIHQLEVYADH.GSATLPVQEYFVSLYDETNTDKSYKQLRELWIDD-AIDVEQYGYEREDQCYLQ..........FGFAEgISASICYTYDAEHGYDDGSTSLHFYNKRE.................
#=GC seq_cons                        ...ILspsas.DYppGFElQSsptpFISWDTTY-ELtpsshsc.hpp...o-Ytpp....hhpF+YPVRIGNlllpshchYhDN.tRpDluVtcYasphaccssoDcSYh-L+chLhc-lshctphhsYEcpDppahs..........Fphss.hphslsYoY-uc.tastG.Tshth.N.R-.................
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