#=GF ID   Phage_integr_3
#=GF AC   PF16795.11
#=GF DE   Archaeal phage integrase
#=GF AU   Eberhardt R;0000-0001-6152-1369
#=GF SE   PDB:4dks
#=GF GA   27.00 27.00;
#=GF TC   27.00 27.10;
#=GF NC   26.90 26.90;
#=GF BM   hmmbuild  HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 90746521 --cpu 8 -E 1000 HMM pfamseq
#=GF TP   Domain
#=GF CL   CL0382
#=GF RN   [1]
#=GF RM   22593158
#=GF RT   The structure of an archaeal viral integrase reveals an
#=GF RT   evolutionarily conserved  catalytic core yet supports a
#=GF RT   mechanism of DNA cleavage in trans.
#=GF RA   Eilers BJ, Young MJ, Lawrence CM;
#=GF RL   J Virol. 2012;86:8309-8313.
#=GF RN   [2]
#=GF RM   22683788
#=GF RT   Structural and functional characterization of the C-terminal
#=GF RT   catalytic domain of  SSV1 integrase.
#=GF RA   Zhan Z, Ouyang S, Liang W, Zhang Z, Liu ZJ, Huang L;
#=GF RL   Acta Crystallogr D Biol Crystallogr. 2012;68:659-670.
#=GF DR   INTERPRO; IPR031857;
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   Catalyses cleavage and ligation of DNA [1-2].
#=GF SQ   75
#=GS A0A1S5WVM4_9VIRU/175-330  AC A0A1S5WVM4.1
#=GS Q5JD00_THEKO/117-278      AC Q5JD00.1
#=GS A0A654M0Z5_9ARCH/5-83     AC A0A654M0Z5.1
#=GS A0AAF0FV86_9CREN/145-310  AC A0AAF0FV86.1
#=GS A0A6A9QRW1_SULME/83-236   AC A0A6A9QRW1.1
#=GS A0AAF0FV43_9CREN/109-265  AC A0AAF0FV43.1
#=GS A0A483CNQ0_9EURY/59-218   AC A0A483CNQ0.1
#=GS A0A1Q6DTZ4_METT1/4-132    AC A0A1Q6DTZ4.1
#=GS A0A484IJW0_9ARCH/193-297  AC A0A484IJW0.1
#=GS A0A6A9QW91_SULME/111-273  AC A0A6A9QW91.1
#=GS A0A4P2VHR2_9ARCH/229-406  AC A0A4P2VHR2.1
#=GS A0A5B2Z7Z2_9ARCH/131-289  AC A0A5B2Z7Z2.1
#=GS A0A0E3X0K4_METMT/82-241   AC A0A0E3X0K4.1
#=GS G3CAW3_APOV1/221-384      AC G3CAW3.1
#=GS Q6UG89_SSV2/169-324       AC Q6UG89.1
#=GS F2KR66_ARCVS/115-288      AC F2KR66.1
#=GS A0A484I6T7_9ARCH/190-367  AC A0A484I6T7.1
#=GS F2KSJ7_ARCVS/32-196       AC F2KSJ7.1
#=GS A0A2R4ZMK6_9CREN/231-407  AC A0A2R4ZMK6.1
#=GS G0EFM5_PYRF1/98-236       AC G0EFM5.1
#=GS A0AA90U415_9ARCH/114-222  AC A0AA90U415.1
#=GS D2REV3_ARCPA/108-272      AC D2REV3.1
#=GS Q6TDM9_9VIRU/180-335      AC Q6TDM9.1
#=GS D2RF15_ARCPA/115-292      AC D2RF15.1
#=GS A0A654M453_9ARCH/11-140   AC A0A654M453.1
#=GS Q6TRV6_9VIRU/198-348      AC Q6TRV6.1
#=GS H2C891_9CREN/83-236       AC H2C891.1
#=GS A0A4E0Q235_9EURY/127-286  AC A0A4E0Q235.1
#=GS Q9YE54_AERPE/137-300      AC Q9YE54.2
#=GS A0A5B2YV22_9ARCH/164-335  AC A0A5B2YV22.1
#=GS C5A4J1_THEGJ/116-277      AC C5A4J1.1
#=GS Q7LXJ1_SACS2/67-220       AC Q7LXJ1.1
#=GS W0I1Z6_9EURY/118-279      AC W0I1Z6.1
#=GS H6VZB8_9VIRU/149-309      AC H6VZB8.1
#=GS VINT_SSV1/176-331         AC P20214.1
#=GS D2RFV8_ARCPA/129-288      AC D2RFV8.1
#=GS A0AAE4SA37_9EURY/117-301  AC A0AAE4SA37.1
#=GS E0STG3_IGNAA/252-430      AC E0STG3.1
#=GS D2RFE6_ARCPA/100-266      AC D2RFE6.1
#=GS A0AA90ZCM7_9ARCH/1-39     AC A0AA90ZCM7.1
#=GS A0A5B2YWY6_9ARCH/227-378  AC A0A5B2YWY6.1
#=GS W0I2B9_9EURY/23-181       AC W0I2B9.1
#=GS A0A2Z5WQ62_9VIRU/180-333  AC A0A2Z5WQ62.1
#=GS A0A977KBI8_9CREN/147-202  AC A0A977KBI8.1
#=GS D1GF92_9VIRU/186-341      AC D1GF92.1
#=GS A0A133USZ8_9EURY/1-57     AC A0A133USZ8.1
#=GS D1GF26_9VIRU/195-348      AC D1GF26.1
#=GS Q5JGU6_THEKO/110-308      AC Q5JGU6.1
#=GS A0A498H2R8_9EURY/131-294  AC A0A498H2R8.1
#=GS A0A2R4ZVQ6_9CREN/132-291  AC A0A2R4ZVQ6.1
#=GS Q980X9_SACS2/176-280      AC Q980X9.1
#=GS Q980X9_SACS2/107-163      AC Q980X9.1
#=GS C5A7A7_THEGJ/110-269      AC C5A7A7.1
#=GS A0A133VNM4_9EURY/80-235   AC A0A133VNM4.1
#=GS S2EXC3_9ARCH/100-254      AC S2EXC3.1
#=GS A0A1S5WVQ5_9VIRU/169-324  AC A0A1S5WVQ5.1
#=GS Q5JDM7_THEKO/118-292      AC Q5JDM7.1
#=GS A0A9X9S4F0_METOG/143-306  AC A0A9X9S4F0.1
#=GS A8TKH3_9VIRU/169-324      AC A8TKH3.1
#=GS A3DM16_STAMF/2-120        AC A3DM16.1
#=GS D2RI01_ARCPA/132-302      AC D2RI01.1
#=GS Q5JEI2_THEKO/124-286      AC Q5JEI2.1
#=GS A0A3G8G9A7_9VIRU/177-339  AC A0A3G8G9A7.1
#=GS Q973D5_SULTO/113-270      AC Q973D5.1
#=GS E0SPU8_IGNAA/164-316      AC E0SPU8.1
#=GS D2RGV2_ARCPA/162-319      AC D2RGV2.1
#=GS A0A0E3X272_METMT/74-232   AC A0A0E3X272.1
#=GS A4YJ18_METS5/87-242       AC A4YJ18.1
#=GS A0A0F7IDB7_9EURY/113-289  AC A0A0F7IDB7.1
#=GS A0A977KC99_9CREN/226-412  AC A0A977KC99.1
#=GS M1SVA9_9VIRU/154-306      AC M1SVA9.1
#=GS A0A0V8RW68_PYROC/96-274   AC A0A0V8RW68.1
#=GS D3S0B0_FERPA/154-325      AC D3S0B0.1
#=GS D1GF58_9VIRU/176-331      AC D1GF58.1
#=GS A2BLY9_HYPBU/1-149        AC A2BLY9.1
A0A1S5WVM4_9VIRU/175-330             ................................................lk--VPTLEEVRQTFI.TVKQY....-PTL....H.TFYRLLLE...SGSRETEALK...V.L.ND.........YN.P.............E..NE...............IR..E..E....G.......F......S...V....YI...L.......N...WTR......GQKKSF.YLFHV......TE.LK...--..--............Q...I...K..I.SK...A..YVD.............KYVRK..LNL....................................VP.PKYIRKFVATQ.L........L.SLG.IP.........SE.I......VDFLEGRTP...GNILTKHYLDLL.TL.AKKEYKKYAEW...................
Q5JD00_THEKO/117-278                 ..................................................EVFITNEDVRTAYN.EVQKR....GKPA....E.TLFLLLVF...SGIRLKQAVE...L.L.RT.........YD.P.............T..KL..............yLI..D..D....K.......A......A...R....YP...I.......F..sTSK......GKKKAF.WAYGP......RD.FF...ER..LE............P...L...E..V.KY...N..TAK.............DLVAF..GK-....................................VS.ANSIRKWHYTF.L........I.QKG.MP.........SE.I......ADFIQGRVS...GSVGATHYLNKA.VL.ADEWYSAVVDD...................
A0A654M0Z5_9ARCH/5-83                ...............................ayvsvinndilqiasgsep--------------.-----....----....-.--------...----------...-.-.--.........--.-.............-..--...............--..-..-....-.......-......-...-....--...-.......-...---......------.-----......--.--...--..--............-...-...-..-.--...-..-IT.............SYNQI..RKRfgd.............................yfvsMN.MYYCRKVFATF.L........R.NEG.IE.........PE.I......IDLLQGRIP...NSVFVRHY----.--.-----------yrp................
A0AAF0FV86_9CREN/145-310             ..........................................yeadksii---------DKALE.QLRKAivsrSILW....S.LLALIDFY...TGLRGTELVW...L.W.TR.........WS.S.............L..RK...............IH..H..N....S.......T......V...I....VE...L.......G...YER......RSKKAW.ITMMP......ME.LA...AI..LDt..........yM...Y...K..V.TV...N..TIQ.............DARDR..LG-....................................IR.WSLFRKAHLAI.L........S.TKL.ME.........HE.I......-DLLQGRMG...K-ITVKHYTKHLrEI.ADKYI------eaykpylp...........
A0A6A9QRW1_SULME/83-236              ................................................lk--VPSVDQVKEWLT.KVKGT....--KV....E.LLFKLSVE...SGVRFTEAIK...L.L.NE.........YS.A.............E..ND...............IC..E..N....N.......I......C...T....ST...L.......N...WSR......GSKRVF.YVFHT......TK.LE...--..--............R...Q...S..I.TY...N..YAK.............KILHE..IN-....................................IN.PKYIRKFVATQ.M........L.SLD.IP.........SQ.V......VDFIEGRTP...DSILSRHYLDLL.TL.AKKYYPIYVNW...................
A0AAF0FV43_9CREN/109-265             .................................................l-YIPSDEDVFTALT.RACSS....SEEL....C.WIYKILVY...SGLRLSEVVK...L.I.NE.........HD.E.............E..KW...............IK..L..N....G.......F......Y...K....YP...L.......S...WKR......GSKQAF.YCYTI......EK.PP...--..--............R...I...Q..A.SN...K..WIS.............NWASK..NKL....................................LP.PKYIRKWVATK.M........L.GLG.IP.........EE.V......VNFIQGRIP...QEILSKHYLKLT.TL.ADQYYQKYAEW...................
A0A483CNQ0_9EURY/59-218              .................................................e-VYVSDEEILDAFL.ACPDE....---L....K.PVFKLLVY...SGSRFSHIYG...M.L.KG.........FD.T.............Q..NV...............IV..E..N....G.......V......A...H....YP...T.......S..gLSK......GAKKTF.HVYFP......SS.FL...PE..LE............N...V..sE..L.KS...E..DYI.............LRMIK..HGR....................................VS.AKTIRKWHLNF.M........I.GHG.VQ.........ES.V......ADFIQGRAA...VTVGSAHYLNKV.KQ.ATDSYGSL---ile................
A0A1Q6DTZ4_METT1/4-132               ...............................tpsqidfnnraiypksnrh--------------.-----....----....-.--------...----------...-.-.--.........--.-.............-..--...............--..-..-....-.......-......-...-....--...-.......-...TTK......GQWVTF.YNKEA......EN.LL...KE..LE............P...R...K..D.SG...K..EIF.............DFVPR..TLTrdmrkts......................kkegimkIT.PQVLRIWFCNE.M........N.DLG.VA.........DR.Y......IDAFCGRVP...KSVLAKHYTDFTpNR.LKEIY------dkad...............
A0A484IJW0_9ARCH/193-297             .............................idkkrmllmhykfpnhfirvs--------------.-----....----....-.--------...----------...-.-.--.........--.-.............-..--...............--..-..-....-.......-......-...-....--...-.......-...---......--KKAY.VSIIN......EE.IL...--..--............Q...I...A..R.KS...E..QVT.............SYNLM..RNTfse.............................ycvsMN.MYYCRKVFATF.L........R.NEG.IE.........PE.I......IDLLQGRIP...NSIFVRHYY---.--.-----------rpdss..............
A0A6A9QW91_SULME/111-273             .................................................i-YIPSVEEIKKTLQ.IAKEY....SENV....Y.FIYRIALE...SGARMSEVLK...V.L.RE.........--.P.............E..KD...............IC..D..V....GdtpttpiL......C...Y....YP...L.......N...WTR......GYKGSF.YIFHI......TP.LR...--..--............K...I...E..M.TE...W..AVN.............SFEKK..YKD...................................aVN.IKYFRKFVATK.M........A.ELG.IP.........LD.V......IDFIQGRKP...TRILTQHYVSLF.GI.AKEHYKKYAEW...................
A0A4P2VHR2_9ARCH/229-406             ................................................py--QIREEDAIRTFD.FLRAN....HRRY....Y.LVYRIMLE...GGVRLEHALR...L.L.ET.........FS.P.............Q..EIvevpgi..svpiprlFE..G..R....G.......F......A...R....YY...L.......G..lVGS......STKPCM.WIYLS......PW.TL...EE..LRs.........taP...V...R..I.SR...R..VVT.............KYARA..HDL....................................LL.PKMVRKLAWRE.M........V.Q-S.MP.........RE.V......ARFVQSRLG..eLKVSEARYEDLL.SE.ADSAFPGYL--ra.................
A0A5B2Z7Z2_9ARCH/131-289             ..............................ifnpeaadmnkmihwlkdti--------------.--RQL....PNKY....S.NILLFATL...TGLRPSECWH...S.I.RL.........IQ.N.............N..KDh.............yVS..K..D....K.......L......L...H....YQ...Y.......Pd.tFLR......RTKKVF.ISLVS......EQ.II...VI..AE............R...A...D..I.KKpypQ..LCK.............IFRAM..NLS....................................MN.MYYCRKIFATY.L........R.DKG.IE.........PE.I......IDLSQGRIP...KSMFLRHY----.--.-----------yrpd...............
A0A0E3X0K4_METMT/82-241              .................................................e-VYVTNDEVKEAYD.ACPDD....---M....K.TIFQLLAY...SGSRLTHIHK...M.L.QS.........FD.E.............R..KI...............IV..D..G....D.......V......A...Y....YP...T.......A..sFSE......GTKNTF.EVFFP......TT.FI...PK..LK............S...I...S..K.VY...C..YFT............fMKKIR..HGR....................................VS.AKTIRKWHLNI.M........I.KEG.VT.........ES.L......ADFIQGRAS...MTVGSAHYLNKV.EQ.AKNEYRRIMR-k..................
G3CAW3_APOV1/221-384                 ..................................................TYVPPDSSILEAAR.RLEGT....--RV....Y.HVFLLLVG...SGARLSTVHW...L.L.RQ........gLD.S.............S..RLv.............cLE..D..R....G.......F......C...R....YH...V.......D...YVK......GEKLQW.ALYSP......RE.FW..eRV..LEe..........pR...L...T..L.SY...N..RVQ.............EQIAG..AG-....................................VK.AKHIRNWVYNK.M........L.SLG.MP.........EG.V......VEFIVGHKA...SSIGRRHYMNMI.VQ.ADMWYTTYLP-v..................
Q6UG89_SSV2/169-324                  ................................................lr--VPTLEEVRKTLS.TVKEY....-PNL....Y.LFYRLLLE...SGSRESEALK...V.L.ND.........YN.P.............Q..NE...............IR..E..E....G.......F......S...I....YI...L.......N...WTR......GQKKSF.YIFHV......TE.LK...--..--............Q...I...K..I.SK...A..YVD.............KYVRR..LNL....................................VP.PKYIRKFFATK.A........L.ELG.IP.........SE.V......VDFLEGRTP...GDILTKHYLDLL.TL.AKKYYPLYAEW...................
F2KR66_ARCVS/115-288                 ................................................ea--FTTDEKIIEALN.SPKVK...kDERR....Q.ILIRLLAY...TGLRLREALE...L.L.RT.........FD.K.............N..KL...............EF..H..G....N.......Y......A...R....YPtyeL.......K...SKA......GTKRTY.YAYMP......AD.FA...RQ..LK............R...I...D..I.KE...T..TVK.............GAKLA..DRI....................................IL.PEQLRKWHTNF.LkrkikekkL.QLG.VT........aET.L......INFIQGRVG...KAVIDRYYLDLV.ED.ADELYTKIAD-e..................
A0A484I6T7_9ARCH/190-367             .................................................l-YIVDDSYIEERLK.QLFSI...gEGEI....A.TIIRFGIF...SGLREDEMLY...V.Y.NK........dIC.P.............D..KSgcsc......sklhvIE..K.pN....G.......V......S...V....VL...I.......Q...WHR......GHKKCY.FTLVP......TK.VL...KE..FK............S...M...D..D.FE...YrpHIRs..........ahEYMKV..KTKd.................................dkIT.FMWLRKAHYNV.M........C.RVM.KP.........FE.-......ANVLAGRA-...KSVDAKHYA---.--.-----------myeldemsqkyaeaw....
F2KSJ7_ARCVS/32-196                  ..............................................didl----KDEEIKEAYK.HFKEE....GNKY....DlILFKLLVF...SGLRLAHVLE...A.L.QT.........WN.P.............D..NV...............RV..Y..G....D.......V......A...A....YD...M.......E..tFIE......GNKKAF.IMLFP......AK.ML...KE..IE............R...F...P..E.SY...T.yNVA.............RHHIN..YKR....................................VS.AITIRHWHYNF.M........IlDNG.IP.........EG.V......ANFIQGRSP...ENIGSANYLAKK.RG.AIQKYQEIVN-k..................
A0A2R4ZMK6_9CREN/231-407             .................................................a-YEISIEDLRKTLE.YLRKK....HELY....Y.TIYLLMLY...SGARLQHALK...L.I.RE.........WN.P.............D..QVvyipml..dresrrlVC..F..E....G.......F......C...R....YY...L.......G...LRG......GSKPCE.WVYMP......KE.LV...QM..IE............RhrgV...R..R.SR...T..LVE.............RYAKR..HGL....................................IQ.PKMLRKINWRI.V........-.ASA.ME.........RD.A......ARFMQSRFG..eLAISEALYENLL.EK.TDRQYPKALE-e..................
G0EFM5_PYRF1/98-236                  ...........................................grvelde--------------.-----....KEWA....Q.TLQQAVLW...SGSRLKH-LW...L.L.PR.........FT.S.............K..RR...............IA..-..A....G.......L......A...V....YD...L.......K...ATI......GRKRVN.VIILP......VD.LE...ER..LL............R...V...-..V.KE...Y..SYE.............SRREI..KG-....................................TP.ATCLRKIHYELcL........A.TAS.GE.........EElL......CSFLHGRH-...RPVSVKHYMMYV.--.-----------ahsvrk.............
A0AA90U415_9ARCH/114-222             .................................................g-YVPADQDVRNAYQ.KIKKE....--KD....R.ILFEILAF...SGIRITELVK...M.L.KE.........FD.P.............T..RS...............IT..D..K....Q.......I......S...K....YP...L.......N...YSR......GNKRSQ.YVYMP......SE.LA...TR..LH............R...F...Y..I.NK...D..TVS.............RDLRK..YG-....................................VS.PKYLRK-----.-........-.---.--.........--.-......---------...------------.--.-----------...................
D2REV3_ARCPA/108-272                 .................................................a-IFISDDEIVEAWE.NHVIN...qPEDI....R.ILFKLLIY...SGVRASHAVP...L.L.NT.........FD.R.............A..QLi.............eIE..E..K....G.......I......A...R....YP...I.......L..eFSK......GQKRGY.FAYMP......LE.FA..rEE..LR............R...V...K..I.SY...R..DYT.............ERARY..-KR....................................VS.ANTIRKWHYNF.M........I.END.VP.........ES.V......ADFIQGRKP...ASVGAMHYLAVA.RQ.ADRLYSQLVN-r..................
Q6TDM9_9VIRU/180-335                 ................................................lk--VPTLEEVRETLD.KVKQY....-PSL....Y.LLYRLLLE...SGSRLREALK...L.L.NN.........YN.P.............Q..NE...............IR..G..D....G.......F......S...I....YV...L.......N...WTR......GQKKSF.YLFHI......TE.LK...--..AE............-...-...K..V.TE...G..QIT.............SAVRR..LNL....................................VP.PKYIRKFVATK.L........F.ELG.VS.........SE.V......VDFLEGRTP...GNILTKHYLDLL.TL.AKKEYKKYAEW...................
D2RF15_ARCPA/115-292                 ................................................qa--FTTTDKIIKAYE.YLKSI...nSEKK....I.ILLKLLIY...SGLRLTEACD...I.L.KN.........FN.K.............S..ELt.............iLE..D..K....G.......I......A...R....YD...LlamykriD...SSKak..aeVTKRAW.VAYMP......AD.FA...KE..LLe.........vcP...I...E..I.SE...E..AMK.............GKRFC..NGI....................................IL.PNQLRKWFSNF.L........K.DNS.VP.........ER.V......IEFMTGKTP...ERVLRQFYFDLL.RE.ADEEYSRIVDK...................
A0A654M453_9ARCH/11-140              .................esfnllpirepkkeylskdrkvlehfrfpsisl--------------.-----....----....-.--------...----------...-.-.--.........--.-.............-..--...............--..-..-....-.......-......-...-....--...-.......-...--R......RTKKTF.ISIMN......ED.IL...NL..VEe.........hgD...E...V..L.NY...D..KVR............lTFERN..HQK....................................FY.MSYCRKIFATF.L........R.NEG.VE.........TE.L......IDLLQGRIA...NSIFVRHYY---.--.-----------rpdmskfdeirekl.....
Q6TRV6_9VIRU/198-348                 ................................................yr--IPSLEEIKKVLN.---HE....DERI....R.ILYRLLLE...SGIRLKEALF...I.L.NN.........YD.P.............A..LD...............QM..E..D....G.......F......Y...V....YT...V.......N...LIR......KSKKSF.YAFHI......TP.LQ...--..--............K...T...Y..I.TE...S..IID.............HTDLP..---....................................VK.PKFIRKFVATK.M........L.ELG.IP.........SE.V......VDFFQGRTP...SSILSKHYLDLL.TL.AKKEYKKYAEW...................
H2C891_9CREN/83-236                  ................................................lk--VPSVDQIRQWAE.KVKGT....--RV....E.LLFRLLLE...SGVRFTEAIK...V.L.SE.........YS.P.............E..ND...............VC..E..N....G.......I......C...I....YT...L.......N...WSR......GSKRVF.YVFHV......SP.LQ...--..--............R...Q...S..I.TY...N..YAK.............KIMHE..LD-....................................IA.PKYIRKFTATK.M........L.ELN.IP.........GE.I......VDFIEGRTP...GNILTKHYLDLY.AL.AKKEYKKYAEW...................
A0A4E0Q235_9EURY/127-286             .................................................e-VYITDEEVQEGYV.SCPTE....---V....K.ILYKLLVC...SGNRLIHLYR...M.L.QL.........FN.E.............K..KV...............VI..D..G....D.......I......A...H....YP...S.......S..eFSS......GNKRTF.QVFFP......TA.YI...SE..IKs..........fQ...S...P..D.KY...K..TVS.............KKLQV..-GR....................................VS.AKTIRKWHLNV.M........I.KEG.VT.........ES.L......ADFIQGRAP...ATVGSAHYLNKV.QQ.AKEEYKRIIE-k..................
Q9YE54_AERPE/137-300                 ..................................................TYVPPDSSILEAAR.RLEGT....--RV....Y.HVFLLLVG...SGARLSTVHW...L.L.RQ........gLD.S.............S..RLv.............cLE..D..R....G.......F......C...R....YH...V.......D...YVK......GEKLQW.ALYSP......RE.FW..eRV..LEe..........pR...L...T..L.SY...N..RVQ.............EQIAG..AG-....................................VK.AKHIRNWVYNK.M........L.SLG.MP.........EG.V......VEFIVGHKA...SSIGRRHYMNMI.VQ.ADMWYTTYLP-v..................
A0A5B2YV22_9ARCH/164-335             ...........................................kindenn-------DINSMID.WVRQS....VKQF....P.RFANVLIFntlTGLRPTEAVE...S.F.NL.........LSsS.............S..RD..............yLS..K..DgrrlE.......H......F...R....FP...S.......I...FIR......RTKKAF.ISIMN......KH.IM...NL..VKe.........skY...E...D..L.NY...S..KIR............lAFQRN..NKK....................................CN.MSYCRKIFATF.L........R.NEG.VE.........PE.L......IDLLQGRIP...NSIFVRHYYR--.--.-----------pqletiynrvadk......
C5A4J1_THEGJ/116-277                 .................................................d-VFISDEEVMTAYL.EVRKR....GKPA....E.TLFLLVAF...SGIRLKQAVE...L.L.KT.........YD.Y.............T..KL..............qII..S..E....K.......A......A...R....YP...M.......F..sISK......GKKRAF.WAYGP......RE.FF...EE..LE............P...W...E..V.KY...N..TAK.............DLVSY..-GR....................................VS.ANTIRKWHYTF.L........I.RQG.VP.........AD.I......ADFIQGRAS...QRVGATHYLNKT.LL.ADEWYSAVV--ge.................
Q7LXJ1_SACS2/67-220                  .................................................l-YIPSIDEVRQTLE.IAREY....SENI....Y.FIYRLALE...SGARLSEILT...V.L.RN.........--.P.............D..RD...............VC..-..E....D.......I......C...Y....YP...L.......S...WER......GFKRSF.YIFHI......TQ.LK...--..--............K...I...D..I.TQ...W..AVS.............DFEKR..YDV....................................VK.IKYIRKFVATK.M........A.ELG.IQ.........LD.I......IDFIQGRKP...SRVLTQHYVSLL.GI.AKENYKKYAEW...................
W0I1Z6_9EURY/118-279                 .................................................t-IFISDDDIIEAFK.VITTR...rAEKY....R.PIFLLTLY...SGARLRTIIR...A.V.NN.........FD.V.............T..KI..............vKI..D..N....E.......L......G...R....YE...I.......N...NIN......SNKKEF.YIYAP......IE.LF...LE..AS............K...Y...Q..Y.DY...K..LAR.............KRITY..-GN....................................VS.ANTLRKYFYTK.A........T.ELG.IP.........EG.V......IDFIQSRST...KSVGVLHYLDKV.KL.ADKYYPKIF--na.................
H6VZB8_9VIRU/149-309                 ................................................gk--FITTGELLEAYD.YFRKH...gRPEE....L.LLFRILAY...SGIRLRHAVQ...L.L.NS.........FS.R.............D..KL...............IY..H..E....N.......F......A...K....YP...L.......F...KHE......GTKVVY.YAYMP......RE.LA...EE..LF............Q...S...G..Y.TE...D..MAR.............KYLRY..-GK....................................VS.ASTIRKWFSTF.L........V.SKG.VP.........PA.A......VNYIQGRKP...KNVLDAYYVQLE.KL.ADEAYSRVLP-d..................
VINT_SSV1/176-331                    .................................................i-YIPTLEEIKRTLQ.LAKDY....SENV....Y.FIYRIALE...SGVRLSEILK...V.L.KE.........--.P.............E..RD...............IC..G..N....D.......V......C...Y....YP...L.......S...WTR......GYKGVF.YVFHI......TP.LK...--..--............R...V...E..V.TK...W..AIA.............DFERR..HKD...................................aIA.IKYFRKFVASK.M........A.ELS.VP.........LD.I......IDFIQGRKP...TRVLTQHYVSLF.GI.AKEQYKKYAEW...................
D2RFV8_ARCPA/129-288                 .................................................e-VFITTEELLEAYE.NILPK....---Y....R.ILFKLIVY...SGMRLDQACD...M.L.AG.........YE.P.............E..NL...............VI..K..E....Dl.....eL......A...R....YP...M.......A..sIGK......GFKRAY.WAYMP......IR.FV...SE..LE............R...T...F..I.KY...G..TAK.............KAIYY..KR-....................................VS.ALSIRKWHLNF.M........I.ENG.VP.........ES.V......ADFIQGRAS...VTVGSTHYLNKT.KQ.ADQFYSKLVD-k..................
A0AAE4SA37_9EURY/117-301             ...............................................ydl----TNAEIRAGLE.KLPGE....---L....K.GFYALLAY...SGARGAQLFD...A.L.TG........dYD.R.............E..IKripa......dkeknIK..Q..P....L.......I......C...L....DV...R.......D...MSR......GKKRAY.YYFFP......PE.CE...AL..LR............A...Y...Q..V.PY...Q..SMS.............TMGKK..INEltqfkr........................ddenraCN.VNSLRKWQTNL.M........L.NYK.GP.........GG.TrlsdtdIDLIQGRVP...DTVLRDNYQNKL.GV.AAAAYSEIVD-t..................
E0STG3_IGNAA/252-430                 ...............................................pyp---INLDDVRKTFE.FLKNN....HQVY....Y.TIYRAMLE...SGARFEHVLK...M.I.ES.........WS.P.............N..EVieipgigietkrlvcFE..D..K....G.......F......C...R....YY...M.......G...LRE......SEKPCE.WIYIS......LE.TT...EM..IQ............K...IvgkR..I.SR...Q..NVW.............RYAKR..HGL....................................IA.PKYMRKVAWRL.M........-.VKA.MN.........RE.V......ARFIQSRLG..eLRISEARYEDLL.SE.ADEAYPKYLQ-i..................
D2RFE6_ARCPA/100-266                 .................................................e-IFIDTNELLEAWRdKISRR....SRKM....Q.ILFKLFVY...SGVRGKQAVA...M.L.NN.........FD.P.............L..KI...............VY..K..D....R.......I......A...R....YP...I.......A..nISK......GSKKGY.WVYMP......SK.FA...KE..LVdfi......ksfN...G...K..M.TK...K..TID.............NMRF-..-GR....................................VS.ASTIRKWHLNF.L........I.ENG.VP.........ES.V......ADFIQGRAS...LTVGSTHYLNKT.KQ.ADEWYSRVVD-r..................
A0AA90ZCM7_9ARCH/1-39                ..................................................--------------.-----....----....-.--------...----------...-.-.--.........--.-.............-..--...............--..-..-....-.......-......-...-....--...-.......-...---......------.-----......--.--...--..--............-...-...-..-.--...-..---.............-----..---....................................--.-----------.-........-.---.MP.........ES.V......ADFIEGRAP...ESVGSMHYLAKV.KQ.ADYWYNAILK-e..................
A0A5B2YWY6_9ARCH/227-378             ...............................slrstlkncdipighrnil--------------.-----....----....-.---LYCTM...TGLRASEAIEsikL.I.KN.........-E.N.............S..RLk.............yIS..N..D....Ke.....mI......K...H....YE...F.......Pe.iFIR......RTKKAY.CSVII......AD.LI...EL..VF............S...C...S..V.--...M..NVAaf.........rsYFTKR..KIP....................................LN.MNYGRKIFATY.L........R.NKG.IE.........PE.I......IDLLQGRIG...SSVFVNHYY---.--.-----------rpdik..............
W0I2B9_9EURY/23-181                  ................................................vr--LPSDEEVRQALS.KVTRE....--DY....L.LVGLVCVF...SGIRVKEAIK...L.V.NE.........FD.R.............S..KL...............HI..E..D....G.......I......A...Y....YE...L.......G...WRR......KSKISY.YVFMP......VE.LA...ER..LR............R...F...R..V.TY...D..GVG.............GYFVK..RG-....................................LP.LKYARKWFINK.M........I.EAG.VQ.........ES.V......VKFMIGHSQ..sGDILATHYINLF.HQ.ARKAYKENV--gr.................
A0A2Z5WQ62_9VIRU/180-333             ....................................krvpsleaildsie--------------.----R....AGPY....R.IVYIILLE...SGLRLVEAVK...L.I.RE.........YD.R.............L..EC...............TR..L..D....G.......Y......T...R....CL...L.......G...YTR......GKKRAL.WGYHI......TP.VE...-P..ME............D...-...-..L.TD...R..RVT.............SYAEK..YRL....................................TP.PKYIRKFVATK.M........A.ELG.VP.........FE.V......IDFIQGRTP...RSVLLQHYAQLL.GV.ADREYAKYAR-w..................
A0A977KBI8_9CREN/147-202             ...............................................ihe---ISFEEVSKALE.TLKRE....NERF....Y.WLYRLLLE...SGIRLAHTLE...S.L.ES.........WN.P.............N..EK...............V-..-..-....-.......-......-...-....--...-.......-...---......------.-----......--.--...--..--............-...-...-..-.--...-..---.............-----..---....................................--.-----------.-........-.---.--.........--.-......---------...------------.--.-----------fve................
D1GF92_9VIRU/186-341                 ................................................lr--VPTLDEVRKTLQ.LAKEY....SENV....Y.FVYRLALE...SGSRLSEILK...V.L.KE.........--.P.............E..KD...............VC..D..N....D.......I......C...Y....YP...L.......A...WTR......GQKSVF.YVFHL......TP.LR...--..--............K...I...D..I.TQ...W..AIS.............DFERR..NDE...................................aIP.IKYIRKFVATE.L........A.GLG.IN.........FD.I......IDFIQGRKP...SRVLTQHYVSMF.AI.AKENYKKYAEW...................
A0A133USZ8_9EURY/1-57                ...............................................mpp--------------.-----....----....-.--------...----------...-.-.--.........--.-.............-..--...............--..-..-....-.......-......-...-....--...-.......-...---......------.-----......--.--...--..--............-...-...-..-.--...-..---.............-----..---....................................--.-KILRKWFVSE.M........K.KLG.VN.........SG.F......IDAFCGRVP...RSIQDSHYTDLSpER.LKEVYQK----anl................
D1GF26_9VIRU/195-348                 ................................................lr--VPSEAEIKEWLT.KVKGT....--KV....E.LLFKLLLE...SGIRLTEAVK...L.V.NE.........YD.P.............K..NE...............TI..E..S....S.......Y......Y...I....YT...M.......N...WSR......GSKRVF.YVFHV......TP.LQ...--..--............K...L...Q..I.TY...N..YAK.............KLFHE..LK-....................................ID.PKYVRKFVATK.C........L.ELN.IP.........AE.V......VDFLEGRTP...TQILTRHYLDLL.TL.TKKYYPLYAEW...................
Q5JGU6_THEKO/110-308                 ................................................ak--VITSEDIREMFS.QLKGK....NETIlrarK.LYLKLLAF...TGLRGDEVRE...L.M.NQ.........FD.P.............R..VVeetfk....afglpeEW..R..K....K.......I......A...V....YD...M.......E...RVKlptrrhGTKRGY.VAVFP......AE.LV...RE..LE............W...F...A..S.TG...Y..KLT.............ADNSD..KHKlfr.............................dytkVKdLALLRKFWQNF.M........N.DNV.MStvpnppadaFH.L......IEFLQGRAP...KTVGGRNYRWNV.RN.AVRIYYYMVD-r..................
A0A498H2R8_9EURY/131-294             .................................................e-IYVSNDEIREAYE.HCPDE....---L....K.TFFRLMMY...SGSRGTHLIG...L.I.KS.........FD.I.............R..QV...............II..D..Ee.ypE.......V......A...H....YP...T.......S..eLAK......GTKRTF.HVYFP......AS.LV...SE..LK............C...Y...S..L.PY...E..HED.............TIYKKlaHDR....................................VN.SKTIRKWHMNF.M........I.KQR.VT.........ES.I......ADFIQGRAA...ATVGSAHYLNKV.QN.ATEEYEKLI--gk.................
A0A2R4ZVQ6_9CREN/132-291             rripsvdelidivsissdiyinyalfiyllsisglrpsevrhleirdiit--------------.-----....----....-.--------...----------...-.-.--.........--.-.............-..--...............--..-..-....-.......-......-...-....-P...I.......M...KGL......STKRAY.YCFVT......DN.YLklaSKlgLN............R...V...K..L.SS...T..GVY.............MARKA..IKQry................................pwFT.LYSLRHFFATY.M........I.RKG.MA.........EA.K......VDFIQGRAP...RTVLRKYYIHLD.--.-----------egealeelyreyre.....
Q980X9_SACS2/176-280                 ..............................................ggis--------------.-----....----....-.--------...----------...-.-.--.........--.-.............-..--...............--..-..-....-.......L......C...Y....YP...L.......S...WIR......GSKGSF.YVFHF......SP.LR...--..--............K...V...T..I.GE...G..AIA.............GFERR..RDG...................................aVA.IKYVRKFVASK.M........A.ELG.IP.........LD.V......IDFIQGRKP...TRVLTQHYISLF.GI.AKEHYRKYAEW...................
Q980X9_SACS2/107-163                 .................................................l-YIPTEEGIRKTLK.LAKEY....SENV....Y.FVYRIALE...SGARLNEILK...V.L.KK.........--.P.............E..KD...............VC..D..S....-.......-......-...-....--...-.......-...---......------.-----......--.--...--..--............-...-...-..-.--...-..---.............-----..---....................................--.-----------.-........-.---.--.........--.-......---------...------------.--.-----------add................
C5A7A7_THEGJ/110-269                 ................................................tr--VYSDEDITNILR.QLTNK....--KH....H.IFLRLVVE...SGLRRSHAIS...A.W.GK.........LR.K.............G..EY...............TT..M..G....E.......F......A...Y....TE...L.......N...IRN......KTKQAF.VCFCS......RE.LA...DA..IH............E...M...NepI.SY...N..-IA.............ENVGK..RQR....................................IL.YNGIRKWWYTT.A........L.DVG.MD.........SN.V......ADFLQGRAP...TSIGARHYLDAL.RL.AKKQYPKLLQ-a..................
A0A133VNM4_9EURY/80-235              .................................................k-KIPPDEAIRDTYS.NLETL....--EF....K.TAYLMLAS...SGMRRSELMS...L.T.PE.........-D.I.............E..FD...............--..S..R....M.......V......T...P....N-...-.......-...KRS......ATKGAW.LTFYN......AE.TE...EH..LD............R...L..gH..L.PN...Q..HFP.............DSYTR..AFKeas..............................sgeIS.PQVLRQWFADK.M........G.RLG.VQ.........DR.F......VDAFCGRTP...KSVLANNYS---.--.-----------dfrprrlekiyk.......
S2EXC3_9ARCH/100-254                 ............................................ywmann------VSIEKIVE.NIRKL....PEKY....Q.IFAMFVLV...SGLRTSEAID...A.F.NN.........HD.-.............-..-K...............IC..H..N....G.......I......L...-....-E...I.......F...TDR......NTKKTN.AVYCH......PF.LH...DK..IN............F...-...K..I.SN...T..GTY............rNLNSK..YLG....................................CE.IRYLRKLNYT-.L........I.AMK.ID.........GM.M......AQFMQGRKG...DVSQRHYFLPMM.SQ.NQKKWNK----lwnk...............
A0A1S5WVQ5_9VIRU/169-324             ................................................lr--VPVLDEIKETLT.KVKQY....-PNL....Y.LLYRLLLE...SGSRESEALR...V.L.NN.........YD.P.............Q..NE...............MQ..E..V....G.......F......S...V....YI...L.......N...WTR......GQKKSF.YLFHV......TP.IQ...--..--............K...I...K..I.SK...A..YVD.............KYVKK..LNL....................................VP.PKYIRKFTATK.M........L.ELG.IP.........SE.V......VDFLEGRTP...GNILTKHYLDLL.TL.AKKEYKKYAEW...................
Q5JDM7_THEKO/118-292                 .................................................k-VNVPDAQIREALK.YYEQK....DPIL....A.TIYKTLVF...SGLRLKAVIE...L.F.NE.........FD.P.............E..KLi............lpRE..Y..P....N.......I......A...K....YP...I.......H...KQK......GQKKAF.YAYLP......RD.FA..lTE..LE............Q...L...P..L.DY...E..HVK.............NRLRV..KLRsvrnt..........................eksvqFS.AAAVREWFATF.L........A.RKG.CP.........FE.V......INFIQGRAE...RGVLEKHYLNLE.IL.ADEWYSSVVDD...................
A0A9X9S4F0_METOG/143-306             ................................................it--FINVSDIVEVFH.YCPDN....---L....K.TFYKLLTY...TGGRGEHIKN...M.I.DT.........FE.P.............D..RIi............tsYE..F..P....D.......V......S...Y....YP...T.......S..eLRK......GTKNTY.FVFFP......TS.FI...DE..LK............E...Y...K..M.PY...N..HIEt...........vYSKVR..HNN....................................VN.TKNIRKWHANM.L........F.KEG.TQ.........ES.V......VDYLQGRTP...QSVVAKHYANLN.MQ.AERCYHSILP-k..................
A8TKH3_9VIRU/169-324                 ................................................lr--VPTLEEVKRTLE.VVKSN....-YSL....Y.LLYRLLLE...SGSRESEALK...V.L.ND.........YN.P.............Q..NE...............MQ..E..V....G.......F......S...I....YI...L.......N...WTR......GQKKSF.YLFHV......TE.LK...--..--............Q...I...K..I.SK...A..YID.............KYVKK..LSL....................................VP.PKYIRKFVATQ.M........L.SLS.IP.........SE.V......VNFIQGRTP...SEVLTKHYLDLL.TL.AKKEYKKYAEW...................
A3DM16_STAMF/2-120                   ...............................................ink--------------.-----....----....-.--------...----------...-.-.--.........--.-.............-..RLv.............cFT..D..K....G.......F......C...R....YY...M.......G...LRE......TTKHCE.WRYFS......SKtLSl.lEE..IA............P...R...K..I.SK...H..LPR.............RYAEK..HGL....................................LL.PKYVRKTAWRL.M........I.-KT.MN.........ME.V......ARFIQSRFG..eLRVSEARYEDLI.SL.ADQAYPIFL--kh.................
D2RI01_ARCPA/132-302                 ..................................................KIIPTDEDVREGFE.YYKRN...lAEEY....Y.LVALIIAF...SGARLRHVLR...M.L.EE.........WD.P.............T..YL...............VY..T..D....D.......F......A...R....YE...I.......G..hLTM......GHKEGF.WIYMP......TW.LA...KK..IR............R...M...K..L.SE...E..TVKtk.........kiTYKAK..SGR...................................lVT.SKYIRKWFNNV.L........A.DFE.KD.........KD.V......RSFIMGRPGdigKSVEGEYYLELL.RR.ADKVYPLVMK-r..................
Q5JEI2_THEKO/124-286                 ..................................................QVFISNEELREAYI.ELTKH...yGKEA....E.VLFKLLAF...TGLRLKHIVK...M.L.NT.........YD.P.............Q..KL..............vIV..N..E....K.......V......A...R....YP...M.......A..eHGK......GTKRAF.WAYMP......AD.FA...RS..LE............R...M...S..I.TY...F..QAQ.............PRTTY..KR-....................................VS.ASTVRKWFSTF.L........A.QRK.VS.........ME.V......IDFIQGRAP...RSVLERHYLNLT.VL.ADEAYAKVVDD...................
A0A3G8G9A7_9VIRU/177-339             .................................................i-YIPTLEDIKRTLK.IAKEY....SENV....Y.LVYRLALE...SGSRLSEILR...I.L.KE.........--.P.............E..RD...............IC..D..V....GgtpttplL......C...Y....YP...L.......S...WQR......GYKGVF.YVFHL......TP.LR...--..--............K...V...D..I.TQ...W..AIS.............DFERR..NKD...................................aVA.IKYVRKFVASK.M........A.EIG.IP.........LD.V......IDFIQGRKP...TRILTQHYVSLF.GI.AKEHYRKYAEW...................
Q973D5_SULTO/113-270                 .................................................t-YVPTDAEVLKLRD.SLPNE....---Y....A.DVYNVLIS...TGLRLTEVLY...L.L.NN.........KD.K.............V..RV...............VD..L..G....E.......F......V...R....IH...L.......D...LMR......KSKNAL.VCYLP......KS.VF...ES..LK............P...L...K..A.HK...D..TVS.............DVFCD..SG-....................................LC.EKYLRKWFNQK.V........R.QVV.KD.........RD.L......AEFLEGRIS..gLSVGAVHYTDLI.AL.ADKEYPKVFE-v..................
E0SPU8_IGNAA/164-316                 ...............................................qka---IEVGDIVGSLQ.VLKDR....RPDI....Y.ILYLFMLY...SSVRFEHALR...L.F.DE.........WN.P.............D..EKlyisyl..nrnvkrlEC..F..D....M.......F......C...R....YY...M.......G...KET......DKKPTG.FAYFP......KQ.LL...AL..IE............R...Yr.eK..LpNK...R..RIE.............RIVSN..LSI....................................LK.PKMIRVSALRE.M........K.AVF.GD.........TD.V......WRFIT----...------------.--.-----------skfge..............
D2RGV2_ARCPA/162-319                 ..................................................EYVPEDSKVIEVFR.KFKDE....--RY....K.ILFKLLAF...SGIRLREALH...L.L.RT.........FD.S.............N..KL...............IT..N..D....K.......I......A...K....YP...L.......G...LDR......GSKKSY.YAYLP......LE.FS...NE..LR............R...M...E..L.DE...D..AVS.............QYFAK..KG-....................................LP.AKYLRKWNYNF.L........I.LNG.VP.........ES.V......ADFIQGRAS...ITVGSMHYLAKV.KQ.ADEWYSRIIS-k..................
A0A0E3X272_METMT/74-232              ...............................................twt---PSIDAVKNVLK.SADNP....--TY....R.QFMELLLY...SGIRIVEGIH...I.I.QN.........FD.T.............T..KL...............HF..E..G....D.......V......A...Y....YD...I.......D...WKR......GKKNAN.KAFMP......AE.FA...KT..LH............R...V..pD..I.SI...N..AVK.............KYFKV..RG-....................................MG.LKYCRNFFTNK.C........V.KAG.IS.........ES.L......IEYMIGHTD...GSVLMTNYLDKL.NN.SLVAYDKV---spt................
A4YJ18_METS5/87-242                  .................................................l-NIPTVDEVKRTLD.LAKEY....SENV....Y.FVYKIALE...SGARLSEILK...A.L.KD.........--.P.............S..RD...............IC..E..S....D.......I......C...Y....YS...M.......A...WQR......GYKGVF.YIFHI......TP.LR...--..--............Q...I...S..I.TE...S..AIQ.............DFERR..RKN...................................aIR.IKYFRKFVASK.M........A.ELG.IP.........LD.V......IDFIQGRKP...TRILTQHYVSLF.GI.AKENYKKYAE-y..................
A0A0F7IDB7_9EURY/113-289             ...............................................giy---LKDEEIRQAYE.WLKEKw..kDKDT....E.LLFKLLVF...SGIRLDHALD...L.L.YN.........FD.P.............R..KL...............EF..K..G....R.......V......A...R....YP...L.......T..dISN......EIKSGE.YAFMP......AE.FA...RK..LR............K...Ik.kK..L.DY...Q..TWE.............NRINV..KRWrgdek..........................ykksrVD.ANAIRKWFGNF.C........L.GHD.VS.........ES.A......TEYFMGHAI...KGMGGKAYFDLRdKL.SWREYEKIVD-k..................
A0A977KC99_9CREN/226-412             ...............................................vhe---ISFEEVTKTLT.VLKQE....NEEI....Y.WLYRLLLE...SGLRLAHALE...L.I.AS.........WN.P.............T..EKvfvepl..gkveercKC..F..E....T.......H......C...R....CW...L.......G...IKR......GKKSAL.WAFMS......KE.TF...EV..LNe.........iaP...T...K..L.SR...H..CVS.............KKAKA..LEIleps............................klrkFS.EQYMKEAFAKK.A........Q.ELGeHP.........EV.I......MQFVQGRTG..eLKVSHLYYDNLL.RK.TDFVYPSWL--ef.................
M1SVA9_9VIRU/154-306                 ................................................lr--LVTEDEVKRALK.NSSGD....-EVA....H.YILSLLVE...SGLRLSEVVK...V.L.NE.........YE.P.............S..QD...............TA..Y..N....T.......F......N...V....YN...V.......N...WRR......GRKNTL.YMFHI......SP.LR...--..--............Q...M...T..L.DY...E..NTR.............VKLAR..--Y....................................ID.AKFMRKFVATK.M........F.ELE.IP.........AE.V......IDFIQGRAP...TTVATKHYIYLF.TI.ARKYYEE----kwv................
A0A0V8RW68_PYROC/96-274              ...............................................pyp---ISLEDVRRTLE.LLGEN....HPVY....Y.TVYRVMIE...SGARYTHVLR...M.I.ES.........WD.PggtveipgvgvttE..RL...............VCpgD..K....G.......F......C...R....YY...M.......G...LRG......SAKQCE.WIYFS......RE.TL...EL..LM............R...-...-..V.AP...R..RVG.............RHQPR..RYAvr...............................hglVL.PKYMRKVAWRL.M........V.-KT.VG.........RE.A......ARFMQSRFG..eLRVSEARYEDLL.GE.ADQAYPKYLE-h..................
D3S0B0_FERPA/154-325                 .................................................k-IFLTDKDVVKCFK.LIKEKw..nDEVT....I.NLYKLLVF...SGIRLEHAYR...L.L.ES.........FD.K.............R..KL...............II..E..G....K.......V......A...M....YP...I.......E..eITK......GHKKGY.FAFLP......AE.FA...RK..LE............K...Y...D..M.MK...L..AAY.............KSRLT..PKQwkpp............................vdspVS.PIRIRAWFQNF.A........I.EHG.VK.........TE.A......LRFIVGHSP...ATVGEAHYYNLK.KI.AKEEYKKIVDK...................
D1GF58_9VIRU/176-331                 ................................................lr--VPTLEEVRKTLS.TVKEY....-PNL....Y.LFYRLLLE...SGSRESEALK...V.L.SE.........YN.S.............Q..NE...............MQ..E..V....G.......F......S...I....YI...L.......N...WTR......GQKKSF.YLFHV......TE.LK...--..--............Q...I...K..I.SK...A..YVD.............KYVKK..LNL....................................TP.PKYIRKFTATK.M........L.ELG.IP.........SE.V......VDFIQGRTP...SEVLTKHYLDLL.TL.AKKEYKKYAEW...................
A2BLY9_HYPBU/1-149                   .................................................m--------------.-----....----....-.------LE...SGLRFEHALR...L.L.ASpilegsvvvYD.R.............VypRL...............YC..DegR....G.......F......C...R....LY...L.......G...FNQ......GVKRAE.FAYFS......TK.TRrlvED..LT............P...W...S..V.HR...R..SVE.............RYVSR..HGL....................................MR.PGLLRKASWQL.L........I.ASG.VP.........RE.V......ARFIHSRFG..eLRVSESYYEGLV.RE.ADQWYPRYLK-h..................
#=GC seq_cons                        .................................................t..h.s.c-lhcshp..hppt......ph....h.hlaplhl....SGhRhpcslc...l.l.pp.........as.s.............p..c................hh..p..p....s.......h......s...h....Y....l.......s...hp+......GpKpsa.asahs......sp.hh...t...lt............p...h...p..l.sh...p..tlp.............phhpp..ht.....................................ls.sphlRKahhsh.h........h.phG.ls.........pc.l......hDFlQGRts...pslhspHYhshh.t..Acc.Y.phh.....................
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