GenomeNet

Database: Pfam
Entry: Phytoreo_S7
LinkDB: Phytoreo_S7
Original site: Phytoreo_S7 
#=GF ID   Phytoreo_S7
#=GF AC   PF07236.14
#=GF DE   Phytoreovirus S7 protein
#=GF AU   Moxon SJ;0000-0003-4644-1816
#=GF SE   Pfam-B_17475 (release 10.0)
#=GF GA   23.00 23.00;
#=GF TC   24.40 23.70;
#=GF NC   19.30 18.40;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 61295632 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   2313270
#=GF RT   Sequence analysis and product assignment of segment 7 of the
#=GF RT   rice dwarf virus genome. 
#=GF RA   Nakashima K, Kakutani T, Minobe Y; 
#=GF RL   J Gen Virol 1990;71:725-729.
#=GF DR   INTERPRO; IPR009873;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This family consists of several Phytoreovirus S7 proteins which
#=GF CC   are thought to be viral core proteins [1].
#=GF SQ   4
#=GS C1JAW4_9REOV/1-506        AC C1JAW4.1
#=GS P7_RGDV/1-484             AC A4PBP8.1
#=GS P7_RDVF/1-505             AC Q85435.1
#=GS A0A1L3KNT6_9VIRU/473-599  AC A0A1L3KNT6.1
C1JAW4_9REOV/1-506                   ...............MSAIVGVCLLSETTVLVRNLNDVVKGLYSRIRGNVTPPKESIEARVSGQTVKVQRTIPINTVFIEYLDQDYISANPTMSAMEIIGSSGNTAPKTTFQSLLPSLSALFGVAFIQGAFMHRVISTT.GPTISFLVLVIGPPGNFTRKPSVAAASSVVQVESTSDIDLNDTVKINALMLQNTKLVSASAIHATSLGEVSEKCDSLDTMIIMKALTYFKRYAYEQSLGTMDNATRVYLNLPIDEIFsgRTASGEQLQNKIATFKES...RGHLAGVVLPDGHGKSTLVSDYPEIFTLL-----KDNNE------ATDPSDNGEI-----EANKSKGKYEGKIVLASSVKELFDNGIRVLGVLKLESEAQVEDEINKDqvlKNKKDKIMEGWKNTSGPNV..VTSKNLPLLHDKVMDIVTTHTKGIKTNRSG-KpieiktdpklrpETRISIYFKNGFPIARYSTNKLSKHGIDVVEAKDLNEDTIIVSNKPKNTPRRVPQNVKTKLES...MRSNlKVDVDTDNLTEEEFIAKIK-a..................
P7_RGDV/1-484                        ...............MTAIVCVSLLSEKAVLVKNLTDHVKAFYESIIGRFVSGPDTITEKRTMDSVIARKIVPSSTVILDGYGESFIRENPNATLMDIVTSSNNTAPKTTYQSIMPAMSALLGVPYVQGAFRHGIISKHgGKKTSLIILVVAPPSGFIRAASVGSSSSVVEVDSNATIKLDDTVGINSAMIKNTKLVSAAGLTAMGIEEIPIKCNSLDSLIIGWSMKYFKGYVDGYKSGVRDQATTILLNTPFKDLF.vENGAGRMLP-NDSFRVSEstiKNQV--IEMGEGTKPDALISTHGDVFIDSEAVFTSDEQEKYRK------DKDEEFFKKCVCNHIIAGDYGNNVIIIENPPHSDVRGLGVKYSFQVN------------...-------KPELDGTESNGIkyYSKDTPQQIHDAILDVISDTNKSLLM---NSKpie......rtgKEAIAVCFKNGFP-KKFAMVEMEKNGVKIVG---MGDSPMLVLDNYPSMLSRAEK--ANRKSSrakIDAP.VVKIDTEDLDTNTLLDVIKK...................
P7_RDVF/1-505                        ...............MSAIVGLCLLSEKVVLSRSLTDEVSKLYKLNRGNVKEPRKYATERMSTQSKPVALQVPVSTIILDYKDEDFIKQNPTYSAMDIIGSPSNTAPQTAFQSIMPSLSALFNTPFIQGAFRHRVISSM.GPEISYLVMVIGPPSGFMDTPMYRTVNHLSILMSNADVDLIDIIAINSTMAKSTKLVFASTFQAMLVNDVYDRCMVLVGIFLSQALPFFRNYVNVQSKGSLPPAVAACLNTPIKELF..SMGSGKREPLALEFRKDN...EGQCLGIVLPKGHEGDTLSSRYPAVFINESEPFSDEERSELSKLKRTDPDAYEKLYSETISKHVSDGSYGNRVIISHKMSRLSNGGVKIIGRFKISDFNTVKKNLSSR...PGEVDSAKEQWEALSGNGL..VTDNNTSMLHDKILDTITSNKPGVVLRDGNKK............SDNIVVCFKNGFPNKKHSLLQLTKNGISVVSLDELTDAGILVESTGPDRVRRSPKALANKLSS...FKGR.KVTLDVDNMSTEALIQKLST...................
A0A1L3KNT6_9VIRU/473-599             wntlhetnynyiypn----------------------------------------------------------------------------------------------------------------------------.---------------------------------------------------------------------------------------------------------------------..----------------ND...YKEVLCIILPPGTGKSSILANQP-LLIEADEAFTKQDFVDLNT------KNDGLVYSRIVQRCIKEGCYDNKIVMVHSRQHAQLVGMTIIGSFSIC-AN---------...-------------------..--------------------------------............---------------------------------------------------------------...----.--------------------dltnsdrfqpymlacahea
#=GC seq_cons                        ...............MoAIVslsLLSEpsVLs+sLsD.VpthYp..hGphh.s.c.hpt+hohpoh.sth.lP.sTlhl-hhspsaIptNPshohM-IlsSssNTAPpTsaQSlhPuhSALhsssalQGAFhHtlISph.G.phShllhVluPPusFhcts.htssspls.l.SsuslcL.DhltINuhMhpsTKLV.AushpAh.lt-l..+C.sLsshhl..uh.aF+tYs...p.Gshs.AsthhLNhPhc-lF..p.uuGc....t.thhhss...csplhsIlLPcGpttsoLlSsaPtlFIptptsFoc--ppchpp......csstclapchlppplpcGsYsN+lllscshp+hpssGlpllGsFpls..s...................h.thcshpussl..hopps...lHDtlhDhlospp.ulhh...s.K............pptIslhFKNGFP.t+auh.phpKpGlplVt...hs-sshlV.sp..sh.pRs.p..ts+hpS...hcu..hVplDs-shsppthlthlp....................
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