GenomeNet

Database: Pfam
Entry: SWIM
LinkDB: SWIM
Original site: SWIM 
#=GF ID   SWIM
#=GF AC   PF04434.20
#=GF DE   SWIM zinc finger
#=GF AU   Aravind L;0000-0003-0771-253X
#=GF SE   Aravind L
#=GF GA   19.60 7.50;
#=GF TC   19.60 7.50;
#=GF NC   19.50 7.40;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 61295632 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Domain
#=GF RN   [1]
#=GF RM   12151216
#=GF RT   SWIM, a novel Zn-chelating domain present in bacteria, archaea
#=GF RT   and eukaryotes. 
#=GF RA   Makarova KS, Aravind L, Koonin EV; 
#=GF RL   Trends Biochem Sci 2002;27:384-386.
#=GF DR   INTERPRO; IPR007527;
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   This domain is found in bacterial, archaeal and eukaryotic
#=GF CC   proteins. It is predicted to be organised into two N-terminal
#=GF CC   beta-strands and a C-terminal alpha helix, thus possibly
#=GF CC   adopting a fold similar to that of the C2H2 zinc finger
#=GF CC   (Pfam:PF00096). SWIM is thought to be a versatile domain that
#=GF CC   can interact with DNA or proteins in different contexts [1].
#=GF SQ   17250
#=GS R0EV01_9BRAS/614-662        AC R0EV01.1
#=GS A0A2U1QJF8_ARTAN/677-705    AC A0A2U1QJF8.1
#=GS A0A370GLT3_9NOCA/88-135     AC A0A370GLT3.1
#=GS A0A1M7E8F4_9BACT/56-94      AC A0A1M7E8F4.1
#=GS A0A150GWD6_GONPE/34-66      AC A0A150GWD6.1
#=GS A0A6A5LL79_LUPAL/102-143    AC A0A6A5LL79.1
#=GS A0A6J1DJH9_MOMCH/29-67      AC A0A6J1DJH9.1
#=GS A0A1U8KBP0_GOSHI/28-66      AC A0A1U8KBP0.1
#=GS B8BF07_ORYSI/492-537        AC B8BF07.1
#=GS Q5ZD68_ORYSJ/530-566        AC Q5ZD68.1
#=GS A0A444XXU8_ARAHY/27-77      AC A0A444XXU8.1
#=GS A0A2P6NZZ1_9EUKA/117-149    AC A0A2P6NZZ1.1
#=GS A0A1S4BQN8_TOBAC/513-544    AC A0A1S4BQN8.1
#=GS A0A2I4F6C7_JUGRE/594-645    AC A0A2I4F6C7.1
#=GS G1Q4F1_MYOLU/71-118         AC G1Q4F1.1
#=GS A0A2P5W7G4_GOSBA/42-86      AC A0A2P5W7G4.1
#=GS A0A0D2X3C0_CAPO3/68-114     AC A0A0D2X3C0.1
#=GS L1NI79_9NEIS/48-84          AC L1NI79.1
#=GS A0A4D8Z099_SALSN/18-59      AC A0A4D8Z099.1
#=GS A0A2U1P9Y7_ARTAN/993-1025   AC A0A2U1P9Y7.1
#=GS A0A165IMF0_EXIGL/334-376    AC A0A165IMF0.1
#=GS A0A1I4I8T1_9BACI/58-94      AC A0A1I4I8T1.1
#=GS A5C4J5_VITVI/599-650        AC A5C4J5.1
#=GS A0A1Q3BYS1_CEPFO/132-173    AC A0A1Q3BYS1.1
#=GS A0A397GMJ2_9GLOM/50-82      AC A0A397GMJ2.1
#=GS V4SEI3_CITCL/601-652        AC V4SEI3.1
#=GS A0A6P5NRX4_ARADU/267-317    AC A0A6P5NRX4.1
#=GS A0A2U1LHI1_ARTAN/613-647    AC A0A2U1LHI1.1
#=GS A0A446QG75_TRITD/499-544    AC A0A446QG75.1
#=GS A0A444ZHN9_ARAHY/503-548    AC A0A444ZHN9.1
#=GS A0A1Z4L645_NOSLI/107-147    AC A0A1Z4L645.1
#=GS A0A1C5C193_9ACTN/83-110     AC A0A1C5C193.1
#=GS A0A1R3HN51_9ROSI/85-118     AC A0A1R3HN51.1
#=GS A0A1R3J3R7_9ROSI/351-387    AC A0A1R3J3R7.1
#=GS A0A6P9E658_JUGRE/384-425    AC A0A6P9E658.1
#=GS A0A061FW45_THECC/491-525    AC A0A061FW45.1
#=GS A0A1Q3BU72_CEPFO/174-217    AC A0A1Q3BU72.1
#=GS A0A1U7WS04_NICSY/254-280    AC A0A1U7WS04.1
#=GS A0A446TH36_TRITD/811-858    AC A0A446TH36.1
#=GS A0A5D2XWS1_GOSMU/398-442    AC A0A5D2XWS1.1
#=GS A0A1U7VLF7_NICSY/359-399    AC A0A1U7VLF7.1
#=GS A0A1U7XNM3_NICSY/491-516    AC A0A1U7XNM3.1
#=GS A0A1S3X6C8_TOBAC/60-90      AC A0A1S3X6C8.1
#=GS A0A1Q4RA10_9CYAN/107-147    AC A0A1Q4RA10.1
#=GS A0A444XNS7_ARAHY/603-654    AC A0A444XNS7.1
#=GS S7TVQ5_DESML/58-90          AC S7TVQ5.1
#=GS A0A6I9SK88_SESIN/425-465    AC A0A6I9SK88.1
#=GS A0A445CEX6_ARAHY/145-186    AC A0A445CEX6.1
#=GS A0A1U8PN83_GOSHI/51-86      AC A0A1U8PN83.1
#=GS A0A2K2CGM7_BRADI/529-567    AC A0A2K2CGM7.1
#=GS A0A445B7B2_ARAHY/129-163    AC A0A445B7B2.1
#=GS A0A4Y7LFK6_PAPSO/1510-1556  AC A0A4Y7LFK6.1
#=GS A0A2I0VTD4_9ASPA/67-104     AC A0A2I0VTD4.1
#=GS A0A1U7V0C5_NICSY/173-217    AC A0A1U7V0C5.1
#=GS A0A1U7XP35_NICSY/112-152    AC A0A1U7XP35.1
#=GS A0A2G2XYG3_CAPAN/719-759    AC A0A2G2XYG3.1
#=GS A0A6I2FG23_9MICO/58-94      AC A0A6I2FG23.1
#=GS A0A2U1KZ51_ARTAN/347-387    AC A0A2U1KZ51.1
#=GS A0A446PEG2_TRITD/696-745    AC A0A446PEG2.1
#=GS A0A1S3XLH1_TOBAC/462-513    AC A0A1S3XLH1.1
#=GS A0A6A2YT38_HIBSY/2165-2208  AC A0A6A2YT38.1
#=GS A0A096NCU6_PAPAN/373-405    AC A0A096NCU6.2
#=GS A0A1D6L6J8_MAIZE/888-935    AC A0A1D6L6J8.1
#=GS A0A1S4D401_TOBAC/365-402    AC A0A1S4D401.1
#=GS A0A1G9Y5K8_9BACI/46-97      AC A0A1G9Y5K8.1
#=GS A0A6P5RTW2_PRUAV/673-708    AC A0A6P5RTW2.1
#=GS A0A5C7GVA4_9ROSI/383-426    AC A0A5C7GVA4.1
#=GS A0A5J4Z184_PORPP/255-294    AC A0A5J4Z184.1
#=GS A0A6J1K1X3_CUCMA/553-586    AC A0A6J1K1X3.1
#=GS A0A4D9C133_SALSN/565-601    AC A0A4D9C133.1
#=GS A0A2G5EY80_AQUCA/636-678    AC A0A2G5EY80.1
#=GS A0A2G3BRT2_CAPCH/279-316    AC A0A2G3BRT2.1
#=GS A0A397KW70_BRACM/501-546    AC A0A397KW70.1
#=GS K0Q4S4_9RHIZ/2-35           AC K0Q4S4.1
#=GS A0A1H5HXC7_9ACTN/58-93      AC A0A1H5HXC7.1
#=GS S4RCR0_PETMA/51-84          AC S4RCR0.1
#=GS A0A2U1MR48_ARTAN/756-794    AC A0A2U1MR48.1
#=GS G4ZJN6_PHYSP/86-127         AC G4ZJN6.1
#=GS I1GY28_BRADI/55-85          AC I1GY28.1
#=GS A0A0C2V6M7_9BACL/48-90      AC A0A0C2V6M7.1
#=GS A0A2G2ZBV0_CAPAN/618-654    AC A0A2G2ZBV0.1
#=GS A0A135TYN5_9PEZI/197-218    AC A0A135TYN5.1
#=GS A0A453IXW9_AEGTS/575-622    AC A0A453IXW9.1
#=GS A0A2I4HKW2_JUGRE/602-653    AC A0A2I4HKW2.1
#=GS K9TMA0_9CYAN/57-89          AC K9TMA0.1
#=GS A0A6I4M1X2_9ACTN/119-152    AC A0A6I4M1X2.1
#=GS A0A445CWJ0_ARAHY/233-284    AC A0A445CWJ0.1
#=GS A0A1X4IBW4_9ACTN/58-93      AC A0A1X4IBW4.1
#=GS A0A6A3P566_9STRA/182-229    AC A0A6A3P566.1
#=GS A0A078JCM3_BRANA/256-286    AC A0A078JCM3.1
#=GS A0A5C7HLI5_9ROSI/344-376    AC A0A5C7HLI5.1
#=GS K0K1L8_SACES/118-155        AC K0K1L8.1
#=GS A0A445BS13_ARAHY/161-203    AC A0A445BS13.1
#=GS A0A6P6X746_COFAR/354-396    AC A0A6P6X746.1
#=GS S5Z7C5_9CREN/37-83          AC S5Z7C5.1
#=GS A0A151TE81_CAJCA/153-197    AC A0A151TE81.1
#=GS A0A0D0CVH8_9AGAM/212-244    AC A0A0D0CVH8.1
#=GS A0A022QJ50_ERYGU/334-377    AC A0A022QJ50.1
#=GS A0A1Z5SG66_9BACT/56-94      AC A0A1Z5SG66.1
#=GS G7ZHJ5_AZOL4/54-94          AC G7ZHJ5.1
#=GS A0A1S8CBB3_9ACTN/73-95      AC A0A1S8CBB3.1
#=GS A0A176U1T8_9FIRM/56-94      AC A0A176U1T8.1
#=GS A0A1S4BGG4_TOBAC/561-607    AC A0A1S4BGG4.1
#=GS A0A1B8B1I2_FUSPO/143-171    AC A0A1B8B1I2.1
#=GS K7I4D7_CAEJA/230-266        AC K7I4D7.1
#=GS A0A6S7PAG8_LACSI/567-591    AC A0A6S7PAG8.1
#=GS A0A444X7S2_ARAHY/714-772    AC A0A444X7S2.1
#=GS A0A6L9HEN8_9CLOT/57-89      AC A0A6L9HEN8.1
#=GS A0A6S7N0H2_LACSI/560-589    AC A0A6S7N0H2.1
#=GS A1BFU2_CHLPD/135-167        AC A1BFU2.1
#=GS K3ZMA8_SETIT/444-478        AC K3ZMA8.1
#=GS A0A5A7VG38_CUCME/572-621    AC A0A5A7VG38.1
#=GS A0A5N5JJP2_9ROSI/563-598    AC A0A5N5JJP2.1
#=GS A0A6H9UTN0_9ACTN/132-158    AC A0A6H9UTN0.1
#=GS A0A1H6EQF8_9ACTN/384-435    AC A0A1H6EQF8.1
#=GS A0A494X177_9FIRM/52-87      AC A0A494X177.1
#=GS A0A445EFQ1_ARAHY/692-733    AC A0A445EFQ1.1
#=GS A0A6P9ETN9_JUGRE/37-73      AC A0A6P9ETN9.1
#=GS A0A445E9X7_ARAHY/513-556    AC A0A445E9X7.1
#=GS A0A2I4H9N9_JUGRE/491-538    AC A0A2I4H9N9.2
#=GS A0A0L1KVE3_9EUGL/146-201    AC A0A0L1KVE3.1
#=GS H2RCP7_PANTR/66-113         AC H2RCP7.1
#=GS A0A6A5NR91_LUPAL/623-651    AC A0A6A5NR91.1
#=GS A0A2G2XD88_CAPBA/442-483    AC A0A2G2XD88.1
#=GS A0A444XIE9_ARAHY/492-537    AC A0A444XIE9.1
#=GS A0A3N6QC88_BRACR/168-216    AC A0A3N6QC88.1
#=GS A0A5A7U2U8_CUCME/669-707    AC A0A5A7U2U8.1
#=GS A0A1R3GXK5_9ROSI/245-293    AC A0A1R3GXK5.1
#=GS A0A6P5TIE7_PRUAV/583-618    AC A0A6P5TIE7.1
#=GS A0A444XFB2_ARAHY/273-307    AC A0A444XFB2.1
#=GS E7NXF4_TREPH/120-145        AC E7NXF4.1
#=GS A0A151P058_ALLMI/252-284    AC A0A151P058.1
#=GS A0A397GNW1_9GLOM/108-137    AC A0A397GNW1.1
#=GS A0A453B2Q8_AEGTS/93-143     AC A0A453B2Q8.1
#=GS A0A1S3W1T1_VIGRR/389-429    AC A0A1S3W1T1.1
#=GS A0A1S3TLK3_VIGRR/469-508    AC A0A1S3TLK3.1
#=GS A0A2U1PZ31_ARTAN/42-93      AC A0A2U1PZ31.1
#=GS A0A5C8J1R3_9BACT/118-142    AC A0A5C8J1R3.1
#=GS A0A1V1T2J4_9FUNG/131-162    AC A0A1V1T2J4.1
#=GS F8JU07_STREN/399-451        AC F8JU07.1
#=GS A0A444XJI1_ARAHY/225-259    AC A0A444XJI1.1
#=GS A0A2P5W9J2_GOSBA/288-336    AC A0A2P5W9J2.1
#=GS A0A261EU67_9BIFI/98-139     AC A0A261EU67.1
#=GS A0A6S7P0E6_LACSI/149-190    AC A0A6S7P0E6.1
#=GS A0A6D2IBT0_9BRAS/322-363    AC A0A6D2IBT0.1
#=GS A0A3Q0EQZ0_VIGRR/252-290    AC A0A3Q0EQZ0.1
#=GS A0A328CYW1_9ASTE/371-412    AC A0A328CYW1.1
#=GS V7BIK1_PHAVU/28-76          AC V7BIK1.1
#=GS A0A6P4DNP2_ARADU/279-330    AC A0A6P4DNP2.1
#=GS A0A3Q1CBP6_AMPOC/49-76      AC A0A3Q1CBP6.1
#=GS A0A0D1L5L6_9MYCO/64-101     AC A0A0D1L5L6.1
#=GS FRS11_ARATH/545-589         AC Q9SY66.1
#=GS A0A554UMD4_9ACTN/133-159    AC A0A554UMD4.1
#=GS A0A444ZHP9_ARAHY/324-366    AC A0A444ZHP9.1
#=GS A0A0S2DGJ0_LYSEN/31-87      AC A0A0S2DGJ0.1
#=GS A0A445EAI4_ARAHY/5-43       AC A0A445EAI4.1
#=GS A0A445DQ59_ARAHY/120-164    AC A0A445DQ59.1
#=GS A0A164PSE2_9NOCA/140-161    AC A0A164PSE2.1
#=GS A0A371PKL8_9BACL/66-91      AC A0A371PKL8.1
#=GS B9MWN4_POPTR/534-574        AC B9MWN4.1
#=GS A0A453F5W8_AEGTS/47-82      AC A0A453F5W8.1
#=GS A0A401FZL0_9DELT/61-95      AC A0A401FZL0.1
#=GS A0A1S3Z9C5_TOBAC/35-87      AC A0A1S3Z9C5.1
#=GS A0A6J0UTR9_9SAUR/562-601    AC A0A6J0UTR9.1
#=GS A0A430QP57_SCHBO/48-80      AC A0A430QP57.1
#=GS A0A1S4D932_TOBAC/428-479    AC A0A1S4D932.1
#=GS A0A5E4FUX0_PRUDU/449-486    AC A0A5E4FUX0.1
#=GS A0A1U8FTT3_CAPAN/515-544    AC A0A1U8FTT3.1
#=GS A0A444WZG9_ARAHY/189-224    AC A0A444WZG9.1
#=GS A0A2P5VZ71_GOSBA/49-86      AC A0A2P5VZ71.1
#=GS A0A103XC86_CYNCS/5-44       AC A0A103XC86.1
#=GS A0A3Q7HDD8_SOLLC/569-603    AC A0A3Q7HDD8.1
#=GS A0A511MVJ1_9DEIO/60-94      AC A0A511MVJ1.1
#=GS A0A653BME0_CALMS/618-654    AC A0A653BME0.1
#=GS A0A1S2K4N1_9ACTN/138-167    AC A0A1S2K4N1.1
#=GS A0A6A3D4R8_HIBSY/617-655    AC A0A6A3D4R8.1
#=GS A0A6J0N6U0_RAPSA/618-647    AC A0A6J0N6U0.1
#=GS A0A0D2NZS3_HYPSF/259-291    AC A0A0D2NZS3.1
#=GS A0A2R6R1D8_ACTCC/549-585    AC A0A2R6R1D8.1
#=GS A0A6P4C5A0_ARADU/602-641    AC A0A6P4C5A0.1
#=GS A0A4U5QNK8_POPAL/642-691    AC A0A4U5QNK8.1
#=GS A0A2U1LQY6_ARTAN/316-381    AC A0A2U1LQY6.1
#=GS A0A1R3II41_9ROSI/610-659    AC A0A1R3II41.1
#=GS A0A6P5U074_PRUAV/568-608    AC A0A6P5U074.1
#=GS A0A6P4DJE6_ARADU/642-681    AC A0A6P4DJE6.1
#=GS A0A397XMH1_BRACM/63-93      AC A0A397XMH1.1
#=GS A0A3G9JNI6_9FIRM/159-178    AC A0A3G9JNI6.1
#=GS A0A2P6Q550_ROSCH/210-239    AC A0A2P6Q550.1
#=GS A0A1S4CKC5_TOBAC/330-378    AC A0A1S4CKC5.1
#=GS A0A075LPM3_9BACI/57-92      AC A0A075LPM3.1
#=GS A0A314YJU5_PRUYE/61-91      AC A0A314YJU5.1
#=GS A0A0D0KGJ8_9NOCA/130-158    AC A0A0D0KGJ8.1
#=GS A0A5S4GB55_9ACTN/384-435    AC A0A5S4GB55.1
#=GS A0A1R3HBZ9_COCAP/111-145    AC A0A1R3HBZ9.1
#=GS A0A445APK6_ARAHY/110-139    AC A0A445APK6.1
#=GS A0A5C7I9X7_9ROSI/494-532    AC A0A5C7I9X7.1
#=GS A0A444XH33_ARAHY/19-60      AC A0A444XH33.1
#=GS A0A061GGF6_THECC/560-598    AC A0A061GGF6.1
#=GS A0A2G3B546_CAPCH/71-122     AC A0A2G3B546.1
#=GS A0A444YF96_ARAHY/314-348    AC A0A444YF96.1
#=GS A0A5B8V9M1_9BACT/56-93      AC A0A5B8V9M1.1
#=GS W2Y193_PHYPR/196-236        AC W2Y193.1
#=GS A0A6P4CCH4_ARADU/280-338    AC A0A6P4CCH4.1
#=GS A0A453QU70_AEGTS/532-574    AC A0A453QU70.1
#=GS A0A314L041_NICAT/149-190    AC A0A314L041.1
#=GS A0A6S6QX27_9FIRM/157-187    AC A0A6S6QX27.1
#=GS E7ML62_9FIRM/47-83          AC E7ML62.1
#=GS A0A6P4DAQ8_ARADU/329-379    AC A0A6P4DAQ8.1
#=GS A0A6J1DQ99_MOMCH/236-277    AC A0A6J1DQ99.1
#=GS A0A6B8M224_9RHIZ/72-104     AC A0A6B8M224.1
#=GS A0A6J1TBJ8_FRAOC/330-369    AC A0A6J1TBJ8.1
#=GS A0A066X8A4_COLSU/108-135    AC A0A066X8A4.1
#=GS A0A6P5NF17_ARADU/117-158    AC A0A6P5NF17.1
#=GS A0A078JCA2_BRANA/31-46      AC A0A078JCA2.1
#=GS A0A444ZFX6_ARAHY/406-445    AC A0A444ZFX6.1
#=GS A0A5E4GPC4_PRUDU/96-136     AC A0A5E4GPC4.1
#=GS A0A388KEU0_CHABU/1322-1375  AC A0A388KEU0.1
#=GS A0A398B161_9BACI/63-99      AC A0A398B161.1
#=GS A0A0D3AWI4_BRAOL/578-611    AC A0A0D3AWI4.1
#=GS A0A6J0K7M5_RAPSA/247-287    AC A0A6J0K7M5.1
#=GS A0A2U1NEF5_ARTAN/299-337    AC A0A2U1NEF5.1
#=GS A0A5N5HNZ2_9ROSA/159-195    AC A0A5N5HNZ2.1
#=GS A0A445B5K0_ARAHY/46-82      AC A0A445B5K0.1
#=GS A0A6D2IL09_9BRAS/585-624    AC A0A6D2IL09.1
#=GS A0A514WPT8_9SPHN/54-86      AC A0A514WPT8.1
#=GS A0A1U7VTY8_NICSY/84-106     AC A0A1U7VTY8.1
#=GS A0A2G2X5B3_CAPBA/547-589    AC A0A2G2X5B3.1
#=GS A0A6S7NCJ6_LACSI/515-551    AC A0A6S7NCJ6.1
#=GS A0A6P6XEY7_COFAR/541-587    AC A0A6P6XEY7.1
#=GS R0FBQ2_9BRAS/550-590        AC R0FBQ2.1
#=GS A0A1S4CDL6_TOBAC/178-219    AC A0A1S4CDL6.1
#=GS A0A251NMP3_PRUPE/575-594    AC A0A251NMP3.1
#=GS A0A5C7H1S9_9ROSI/242-292    AC A0A5C7H1S9.1
#=GS A0A7M7HCF8_STRPU/595-624    AC A0A7M7HCF8.1
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