GenomeNet

Database: Pfam
Entry: SatRNA_48
LinkDB: SatRNA_48
Original site: SatRNA_48 
#=GF ID   SatRNA_48
#=GF AC   PF17485.8
#=GF DE   Satellite RNA 48 kDa protein
#=GF AU   El-Gebali S;0000-0003-1378-5495
#=GF SE   PRODOM:PD014367
#=GF GA   27.00 27.00;
#=GF TC   627.20 626.90;
#=GF NC   25.60 22.70;
#=GF BM   hmmbuild  HMM.ann SEED.ann
#=GF SM   hmmsearch -E 1000 -Z 90746521 --cpu 8 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   21994595
#=GF RT   Satellite RNAs and Satellite Viruses of Plants.
#=GF RA   Hu CC, Hsu YH, Lin NS;
#=GF RL   Viruses. 2009;1:1325-1350.
#=GF RN   [2]
#=GF RM   7483283
#=GF RT   Specificity in the association of tomato black ring virus
#=GF RT   satellite RNA with helper virus.
#=GF RA   Oncino C, Hemmer O, Fritsch C;
#=GF RL   Virology. 1995;213:87-96.
#=GF DR   INTERPRO; IPR035312;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   Satellite RNAs (satRNAs) are short RNA molecules, usually <1,500
#=GF CC   nt, that depend on cognate helper viruses for replication,
#=GF CC   encapsidation, movement, and transmission, but most share little
#=GF CC   or no sequence homology to the helper viruses. In contrast,
#=GF CC   satellite viruses are satRNAs that encode and are encapsidated
#=GF CC   in their own capsid proteins (CPs) [1]. Members of this family
#=GF CC   are nonstructural proteins of 48kDa in size which been shown to
#=GF CC   be involved in the replication of the sat-RNA. They are found in
#=GF CC   tomato black ring virus (TBRV) [2].
#=GF SQ   0
//
DBGET integrated database retrieval system