GenomeNet

Database: Pfam
Entry: SepQ
LinkDB: SepQ
Original site: SepQ 
#=GF ID   SepQ
#=GF AC   PF06622.14
#=GF DE   SepQ protein
#=GF AU   Moxon SJ;0000-0003-4644-1816
#=GF SE   Pfam-B_21060 (release 10.0)
#=GF GA   22.90 22.90;
#=GF TC   24.60 24.30;
#=GF NC   22.50 22.80;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 61295632 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF DR   INTERPRO; IPR009532;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This family consists of several enterobacterial SepQ proteins
#=GF CC   from Escherichia coli and Citrobacter rodentium. The function of
#=GF CC   this family is unclear.
#=GF SQ   5
#=GS A0A6L2ZKC4_9ENTR/10-258  AC A0A6L2ZKC4.1
#=GS D2TKF2_CITRI/1-305       AC D2TKF2.1
#=GS A0A516SA86_9BURK/1-324   AC A0A516SA86.1
#=GS Q7DB73_ECO57/1-305       AC Q7DB73.1
#=GS G2GWN2_9ENTR/10-282      AC G2GWN2.1
A0A6L2ZKC4_9ENTR/10-258             kelsaligngrtqg-----------------------------------AVTTTFKMMEGKGVCLPVSLEGVNCGIWLSEQEWASWLESVLAVSDPNCLNNDLLVGMSHWLlssLQ......RVLPLLVVSNQLSRPYDLLKQWAVVCTFSLENQQFNAVLFDWPLMKLHKIFADWPsd.qpsSLGSKSQSLGYQCGLVAGWCRLSLTQ...LrtiKVGDGLRVCAAADLENNCCWLWqLCGSQFYIRLSEENqMTIQNInQDIDEL----------------------------------------------------------------------------lhldtdttagsavenlhsvsldalkkt.............................................................................
D2TKF2_CITRI/1-305                  ..............MKPLNSQSNMKINDFYLPLLPVIGIGRLYITSEGHACHAYFREVSGNGFRFTLAYSGYEGCFWVSEEQLIQWCHELFPYSDSRLIPEDTIKLMLLWA...IH......ATLPEDDASVDDVQFTTLNKDIYPVIENNNGKNRLNVIILETTVQSLQYLINDNW......QLVPHSNTLFFDGYIAPGWTDYPITK...L...SIGDSLRLYHVDDSQERKCWLV.INNPLATVKLSDNN.LSVTDV.QAADPLCIISNETVMNRIYCAIGTINVDIHKLRNLKKDDTIGSVGYHLFGGGRLIRNNTIIAYGTIIKINEDFYFNISVVCD........................................................................................................
A0A516SA86_9BURK/1-324              ....msladvydel----------------ESLLLLVSSGRTIDTASGDRITLEYKKSGGNGLVLNFRMGDRALSAWVAEHEYCRWIEPMLPVPSADRIPPELFPLLCTWS...LApldawlTSLGFEQILGDSIARGEGDAEEGWVLTIEGDRGQLCLSLLDWPLDWLKCIAEQQA......PFEMQACEMTAPVCVAAGWTRMTLNNlrsL...RIGDGLVLDTSARIDEGEWYLF.ERKPLARISCAEDD.------.----------------------------------------------------------------------------------slatveelmddfddwlniaeiektlgecepepftgvndivmtvvaeagrielplsslaslhegqlldanirhnrdirlkingktigsgslvkvgeklmvriekl
Q7DB73_ECO57/1-305                  ..............MKPLSSQLNMKINDFYLPLLPVIGTGRLYITSKGHACHAYFREVSGHGIRFTLTYSGYEGRFWISEEQFIQWCQELFPYSESRLIPEDTIKLMILWV...MQ......TALPEGDVSVDDVQFTMLNKDIYPVIENNNGENRLNVIILETTVQSLQYLINDNW......QLVPHSNALFFDGYIVPGWTDYPVTE...L...RVGDSLRLYHVDDSQERRCWIV.INTPLATVNLSDNN.LSVTDV.LAADLLSALSNETVMNRIYCAIGTVHIDIHMLRNVKKDDIINSDGYHLFGGCQLIRNNTTIAYGSIVKINEDFYFTVSIVCD........................................................................................................
G2GWN2_9ENTR/10-282                 kelsaligngrtqg-----------------------------------AVTTTFKVMEGKGVCLPVSIEGVNCGIWLSEQEWASWLESVLAVSDPNCLNNDLLVGMSHWLlssLQ......RVLPLLVVSNQLSRPYDLLKQWAVVCTFTLENQQFNAVLFDWPPMKLHKIFAD-WpsdppsSLGSKSQSLGYQCGLVAGWCRLSLTQ...LrtlKVGDGLRVCAAADLENNCCWLWqLGGPQFYIRLSEENqMTIQNInQDIDELLHLDTNTI--------------------------------------------------------------------agstvenlnsvsldaltktlvmeigrlemkiedikaisvgqtl.............................................................
#=GC seq_cons                       ....h.lusshsph.................sLL.llu.GRhh.TupGcAlTspFKcsuG+GlsLslohuGhssuhWlSEcEaspWlEslLPVSDucpIPsDLlsLMspWl...LQ......ssLPhtsVSsDslphs-LsK-husVlThss-csQLNllLLDWPlppL+pIhsDpW......sLss+SsoLsassslVAGWTRhoLTp...L...+VGDGLRLssuADl-EscCWLa.lssPLApI+LSE-N.holpsl.QshD.L.hlsspTl.....................................................................h.ss-ph.ss..-.Lp.s.l.thht..............................................................................
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