GenomeNet

Database: Pfam
Entry: VP17_central_barrel
LinkDB: VP17_central_barrel
Original site: VP17_central_barrel 
#=GF ID   VP17_central_barrel
#=GF AC   PF22210.3
#=GF DE   Large MCP VP17 central beta-barrel
#=GF AU   Bateman A;0000-0002-6982-4660
#=GF AU   Chuguransky S;0000-0002-0520-0736
#=GF SE   ECOD:EF19013
#=GF GA   27.00 27.00;
#=GF TC   27.10 150.70;
#=GF NC   24.70 25.10;
#=GF BM   hmmbuild  HMM.ann SEED.ann
#=GF SM   hmmsearch -E 1000 -Z 90746521 --cpu 8 HMM pfamseq
#=GF TP   Domain
#=GF CL   CL0055
#=GF RN   [1]
#=GF RM   23623731
#=GF RT   Bacteriophage P23-77 capsid protein structures reveal the
#=GF RT   archetype of an ancient  branch from a major virus lineage.
#=GF RA   Rissanen I, Grimes JM, Pawlowski A, Mantynen S, Harlos K,
#=GF RA   Bamford JK, Stuart DI;
#=GF RL   Structure. 2013;21:718-726.
#=GF DR   INTERPRO; IPR054005;
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   This entry represents the central beta-barrel of VP17, the large
#=GF CC   major capsid protein of of bacteriophage P23-77 [1].
#=GF SQ   3
#=GS D7BFU1_ALLS1/107-189  AC D7BFU1.1
#=GS Q859S7_9VIRU/103-184  AC Q859S7.1
#=GS C8CHL5_9VIRU/103-184  AC C8CHL5.1
D7BFU1_ALLS1/107-189             LAGQNLGAPAARNVVINDLQKSTQaGQATLPATYHPDVAVWATTGSGRVKCTITNVDYTTKTITFTEPAGVNGASAIQVYYLS
Q859S7_9VIRU/103-184             FAGQNLASPAARTVTLPYLIPSLQ.GAPTLPSTYHPDVAVWAKVGGVWQRCQINAVNYAGQQVTFVEPAGVTGTQDIEIYYTH
C8CHL5_9VIRU/103-184             VNGRNLSDPDSRTVNLPFLMQTPQ.GAPTLPSTYHPDVAVWAKVGSTWQPCVITAINYSTGDVTFTEPAGVTASDGIEIYYVH
#=GC seq_cons                    lAGQNLuuPAARTVsLPaLhpSsQ.GAPTLPSTYHPDVAVWAKVGSsWQ+CsITAVNYoTpsVTFTEPAGVTGosuIEIYYlH
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