#=GF ID VP1_VP3
#=GF AC PF06281.18
#=GF DE Structural protein VP1/VP3
#=GF PI DUF1035;
#=GF AU Moxon SJ;0000-0003-4644-1816
#=GF AU Chuguransky S;0000-0002-0520-0736
#=GF SE Pfam-B_11733 (release 9.0)
#=GF GA 25.00 25.00;
#=GF TC 30.00 44.10;
#=GF NC 23.90 21.40;
#=GF BM hmmbuild HMM.ann SEED.ann
#=GF SM hmmsearch --cpu 8 -E 1000 -Z 90746521 HMM pfamseq
#=GF TP Family
#=GF RN [1]
#=GF RM 1926776
#=GF RT Complete nucleotide sequence of the virus SSV1 of the
#=GF RT archaebacterium Sulfolobus shibatae.
#=GF RA Palm P, Schleper C, Grampp B, Yeats S, McWilliam P, Reiter WD,
#=GF RA Zillig W;
#=GF RL Virology 1991;185:242-250.
#=GF DR INTERPRO; IPR009379;
#=GF DR SO; 0100021; polypeptide_conserved_region;
#=GF CC This family consists of Structural proteins VP1 and VP3 from
#=GF CC Sulfolobus spindle-shape virus 1 (SSV1), two of the three
#=GF CC structural proteins [1].
#=GF SQ 28
#=GS VP3_SSV2/21-92 AC Q6UG62.1
#=GS A0A6A9QP92_SULME/61-115 AC A0A6A9QP92.1
#=GS Q973C5_SULTO/1-52 AC Q973C5.1
#=GS Q6TDK6_9VIRU/84-137 AC Q6TDK6.1
#=GS D1GF83_9VIRU/35-88 AC D1GF83.1
#=GS M1T2W5_9VIRU/13-66 AC M1T2W5.1
#=GS A0A3G8G8P3_9VIRU/1-52 AC A0A3G8G8P3.1
#=GS VP3_SSV1/20-92 AC P20225.1
#=GS D1GFC2_9VIRU/22-89 AC D1GFC2.1
#=GS D1GF84_9VIRU/21-97 AC D1GF84.1
#=GS A0A3G8G998_9VIRU/20-88 AC A0A3G8G998.1
#=GS A8TKG1_9VIRU/21-92 AC A8TKG1.1
#=GS A0A1S5WVK7_9VIRU/20-95 AC A0A1S5WVK7.1
#=GS H2C884_9CREN/83-136 AC H2C884.1
#=GS Q6TRS8_9VIRU/36-89 AC Q6TRS8.1
#=GS A0A1S5WVP3_9VIRU/84-137 AC A0A1S5WVP3.1
#=GS Q6TRS7_9VIRU/20-96 AC Q6TRS7.1
#=GS A0A1S5WVL2_9VIRU/85-138 AC A0A1S5WVL2.1
#=GS D1GFC1_9VIRU/88-140 AC D1GFC1.1
#=GS H2C885_9CREN/20-83 AC H2C885.1
#=GS M1TAY8_9VIRU/43-115 AC M1TAY8.1
#=GS Q6TDK5_9VIRU/21-93 AC Q6TDK5.1
#=GS VP1_SSV1/91-144 AC P20223.3
#=GS A8TKF9_9VIRU/83-136 AC A8TKF9.1
#=GS A0A1S5WVQ2_9VIRU/21-93 AC A0A1S5WVQ2.1
#=GS D1GF50_9VIRU/91-143 AC D1GF50.1
#=GS Q6UG63_SSV2/35-88 AC Q6UG63.1
#=GS D1GF51_9VIRU/22-94 AC D1GF51.1
VP3_SSV2/21-92 ................VLFQPIISYVNNVTTS.GTYTTII..SGTL..TQTS.FVSNPNYVGSSNAPLVSLVPLFYLIVLIVVPAVVAYKIYK--d..
A0A6A9QP92_SULME/61-115 ................VLLPVITSEVSGLT--.-------..SGTA..----.----AQVTGT-NATVLNLVPLFYILVLVIVPAVIMFKLYQ--gr.
Q973C5_SULTO/1-52 ................MLLSVITGQVNSLT--.-------..SGTS..----.----PSVTGT-DVTFLNLVTLFYILVL--VPAVASYKIYK--e..
Q6TDK6_9VIRU/84-137 ................VLLPVIVSQVNNLT--.-------..SGTA..----.----PSVTGT-NATLLQLVPLFYILVLIIVPAVVAYKIYK--d..
D1GF83_9VIRU/35-88 ................VLLPVITSQVNNLT--.-------..SGTT..----.----PSVTGT-NATLLNLVPLFYILVLIIVPAVVAYKIYK--d..
M1T2W5_9VIRU/13-66 vllpvitqevtsltgg----------------.-------..----..----.--STPQVTGT-DATVLNLVPLFYILVLLIVPAVVAYKIYR--e..
A0A3G8G8P3_9VIRU/1-52 ...............m---PVIVSQVNNLT--.-------..SGTA..----.----PSVTGT-NATLLQLVPLFYILVLIIVPAVVAYKIYK--e..
VP3_SSV1/20-92 ................ALFGPINSVVNNVTTS.GTYTTIV..SGTV..TTSS.FVSNPQYVGSNNATIVALVPLFYILVLIIVPAVVAYKLYKEE...
D1GFC2_9VIRU/22-89 ................VFFSPIITYVNQVSSP.GSYTTV-..-GTT..--SS.FVANPYYAGSAGATIASLVPIFYLLVIIAVPAFVVYRM----tre
D1GF84_9VIRU/21-97 ................VLFSPIISYVNNITTS.GTYTTYAtvSGTLtvTTSS.FVSNPNYVGSSNAPLVSLVPLFYLLVLIVVPAVIAYKIYKSE...
A0A3G8G998_9VIRU/20-88 ................ALLSPIVSYVNLLTTP.-SFTTV-..SGTV..TQTN.--PNPQYVGSSNAPILQLVPLFYILVLIVVPAVVAYRIYKSD...
A8TKG1_9VIRU/21-92 ................VLFQPIISYVNNITTS.GTYTTIV..SGTV..TTSS.FVSNPQYVGSSNVTLVDLVPLFYLIVLIVVPAVIAYKIYK--e..
A0A1S5WVK7_9VIRU/20-95 ................VLFQPIYSEVVYVTTS.GTYTTYTtvSGTVteTTSS.FVPNPAYVGSSNAPIVALVPLFYILVLIIVPAVVAYKIYK--d..
H2C884_9CREN/83-136 ................VLLPVITSQVSTLT--.-------..SGTS..----.----PSVTGT-NATLLNLVPLFYILVLIIVPAVVAYKIYK--e..
Q6TRS8_9VIRU/36-89 ................VLLPVIVSQVNNLT--.-------..SGTA..----.----PAVTGT-NATLLNLVPLFYILVLIIVPAVVAYKIYK--d..
A0A1S5WVP3_9VIRU/84-137 ................VLLPVIVSQVNNLT--.-------..SGTT..----.----PSVTGT-NATLLQLVPLFYILVLIIVPAVVAYKIYK--d..
Q6TRS7_9VIRU/20-96 ................VLFQPIYNEVVYVTTS.GTYTTYTtvSGTLteTTSS.FIPNPQYVGSSNATVVSLVPVFYLLVLIIVPAVIGYRLYKSE...
A0A1S5WVL2_9VIRU/85-138 ................VLLPVITSEVTNLT--.-------..SGTS..----.----PQVTGT-DATLLQLVPLFYILVLIIVPAVIAYKIYK--e..
D1GFC1_9VIRU/88-140 ................VLLPVITSEVSGLT--.-------..SGTD..----.----ASVTGT-NATLLNLVPLFYILVIIIVPAVVVYKMMK--...
H2C885_9CREN/20-83 ................VLLSPIAGYVNLVTTP.----TIK..VGNT..TE--.--ANPQYVGSSNATLVDLVPLFYILVLIVVPAVIAYKMYR--d..
M1TAY8_9VIRU/43-115 ................VLLPVITSEVSSLTTTsYSVYTTT..SSTV..TETLtSTIYPAVQGS-SATLLQLVPLFYILVLIIVPAVMAYKLYK--e..
Q6TDK5_9VIRU/21-93 ................VLFNPIISEVNYLTTP.GTYTTIV..SGTL..TTTS.FVSNPQYVGSSNAPIVQLVPIFYLLVLIIVPAVGAYRIYKSE...
VP1_SSV1/91-144 ................VLLPVIVSQVNNLT--.-------..SGTS..----.----PQVTGT-NATLLNLVPLFYILVLIIVPAVVAYKIYK--d..
A8TKF9_9VIRU/83-136 ................VLLPVITSQVNNLT--.-------..SGTT..----.----PSVTGT-NATLLNLVPLFYILVLIIVPAVIAYKIYK--d..
A0A1S5WVQ2_9VIRU/21-93 ................VLFQPIISFVNNITTS.GSYTTVV..SGTV..TQTQ.FVSNPNYVGSSNAPLVSLVPLFYLIVLIVVPAVIAYKIYKSE...
D1GF50_9VIRU/91-143 ................VLLPVITSEVNNLT--.-------..SGTA..----.----PSVTGT-NATLLDLVPLFYILVIIIVPAVVVYKMMK--...
Q6UG63_SSV2/35-88 ................VLLPVITSQVTNLT--.-------..GGT-..----.---NPQVTGT-NATLLNLVPLFYILVLIIVPAVIAYKIYR--d..
D1GF51_9VIRU/22-94 ................VFFSPIITYVNQVSSP.GSYTTVV..SGTI..TTSS.FVSNPYYAGSSGAIIASLVPIFYLLAIIAVPAFIIYRMV---rer
#=GC seq_cons ................VLhssIsSpVNsLT............SGTs...........PphsGo.NATLLsLVPLFYILVLIIVPAVlAYKIYK..-..
//
