GenomeNet

Database: Pfam
Entry: VP2_lagovir
LinkDB: VP2_lagovir
Original site: VP2_lagovir 
#=GF ID   VP2_lagovir
#=GF AC   PF05801.17
#=GF DE   Lagovirus minor capsid protein VP2
#=GF PI   DUF840;
#=GF AU   Moxon SJ;0000-0003-4644-1816
#=GF SE   Pfam-B_8265 (release 8.0)
#=GF GA   25.00 25.00;
#=GF TC   26.10 252.80;
#=GF NC   22.20 19.70;
#=GF BM   hmmbuild  HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 90746521 --cpu 8 -E 1000 HMM pfamseq
#=GF TP   Family
#=GF DR   INTERPRO; IPR008558;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This entry includes minor capsid protein VP2 from Rabbit
#=GF CC   hemorrhagic disease virus and related lagoviruses. VP2 is minor
#=GF CC   structural protein that forms a portal-like structure at a
#=GF CC   unique three-fold axis of symmetry, following binding to the
#=GF CC   host receptor. The channel formed by VP2 may allow the delivery
#=GF CC   of the viral genome through the host endosomal membrane.
#=GF SQ   1
#=GS VP2_RHDVF/5-117  AC P27412.1
VP2_RHDVF/5-117             MSEFIGLGLAGAGVLSNALLRRQELQLQKQAMENGLVLKADQLGRLGFNPNEVKNVIVGNSFSSNVRLSNMHNDASVVNAYNVYNPASNGIRKKIKSLNNSVKIYNTTGESSV
#=GC seq_cons               MSEFIGLGLAGAGVLSNALLRRQELQLQKQAMENGLVLKADQLGRLGFNPNEVKNVIVGNSFSSNVRLSNMHNDASVVNAYNVYNPASNGIRKKIKSLNNSVKIYNTTGESSV
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