#=GF ID YLL032C_C
#=GF AC PF29523.1
#=GF DE YLL032C-like C-terminal domain
#=GF AU Morveli N;0000-0003-2496-881X
#=GF AU Bateman A;0000-0002-6982-4660
#=GF SE TED:Q07834_TED06
#=GF GA 27.00 27.00;
#=GF TC 27.20 27.00;
#=GF NC 26.40 25.00;
#=GF BM hmmbuild HMM.ann SEED.ann
#=GF SM hmmsearch -Z 90746521 -E 1000 --cpu 8 HMM pfamseq
#=GF TP Domain
#=GF RN [1]
#=GF RM 14562095
#=GF RT Global analysis of protein localization in budding yeast.
#=GF RA Huh WK, Falvo JV, Gerke LC, Carroll AS, Howson RW, Weissman JS,
#=GF RA O'Shea EK;
#=GF RL Nature 2003;425:686-691.
#=GF DR SO; 0000417; polypeptide_domain;
#=GF CC This entry represents the C-terminal domain in YLL032C-like
#=GF CC proteins found in fungi, particularly in Saccharomycetaceae and
#=GF CC related yeasts. These proteins contain a KH domain and are
#=GF CC involved in RNA binding. The representative protein YLL032C is
#=GF CC localised to the cytoplasm and exhibits mRNA binding activity
#=GF CC [1]. These proteins undergo phosphorylation and are involved in
#=GF CC RNA metabolism. The specific function of these proteins remains
#=GF CC to be determined.
#=GF SQ 32
#=GS A0A376BBB4_9ASCO/695-776 AC A0A376BBB4.1
#=GS YL032_YEAST/641-721 AC Q07834.1
#=GS C5DHP7_LACTC/601-679 AC C5DHP7.1
#=GS Q753Y6_EREGS/606-681 AC Q753Y6.1
#=GS A0A0C7N1X6_9SACH/600-678 AC A0A0C7N1X6.1
#=GS A0A7H9B461_ZYGMR/639-715 AC A0A7H9B461.1
#=GS A0A7H9HRC1_9SACH/621-697 AC A0A7H9HRC1.1
#=GS J7S6G3_HUIN7/631-695 AC J7S6G3.1
#=GS A0A5E8BZX7_9ASCO/757-852 AC A0A5E8BZX7.1
#=GS G8Y8D3_PICSO/678-755 AC G8Y8D3.1
#=GS A0A1E4RJ48_9ASCO/667-750 AC A0A1E4RJ48.1
#=GS G8ZWI8_TORDE/622-698 AC G8ZWI8.1
#=GS I2GWY6_HENB6/645-727 AC I2GWY6.1
#=GS M3IGS7_CANMX/658-754 AC M3IGS7.1
#=GS A0A642V042_DIURU/631-712 AC A0A642V042.1
#=GS G8BUT5_TETPH/633-709 AC G8BUT5.1
#=GS G8JVC3_ERECY/607-682 AC G8JVC3.1
#=GS C4YAL7_CLAL4/703-793 AC C4YAL7.1
#=GS G3AQM9_SPAPN/633-723 AC G3AQM9.1
#=GS A7TRZ9_VANPO/636-712 AC A7TRZ9.1
#=GS C5DZE2_ZYGRC/626-702 AC C5DZE2.1
#=GS A0A421JRI7_9ASCO/642-731 AC A0A421JRI7.1
#=GS A0A8J5R2T8_9ASCO/656-758 AC A0A8J5R2T8.1
#=GS A0A1L0CV86_9ASCO/704-797 AC A0A1L0CV86.1
#=GS B5RTH2_DEBHA/671-760 AC B5RTH2.1
#=GS A3GHF4_PICST/657-759 AC A3GHF4.2
#=GS A0A1E3PIV0_9ASCO/349-443 AC A0A1E3PIV0.1
#=GS A0A1G4MB99_LACFM/600-678 AC A0A1G4MB99.1
#=GS A0A1E4SGF4_9ASCO/659-742 AC A0A1E4SGF4.1
#=GS A0A1G4JRJ2_9SACH/603-681 AC A0A1G4JRJ2.1
#=GS J8Q2C8_SACAR/643-723 AC J8Q2C8.1
#=GS A0A1G4J0G8_9SACH/602-680 AC A0A1G4J0G8.1
A0A376BBB4_9ASCO/695-776 .........yriqtsyqyl-----LGKYLNEDD.....DFVNTIKTPILAALNISMEF...................TGDSIILV.YHK.EKANEIINVVSLISDFLKNkKNIEIISKTEL.---h.....
YL032_YEAST/641-721 ...................EYEFKIDQEIDPNKe...yEFYNLIVVPFLQIMNIIVTF...................EKDLITFT.FEKdTNENTLTKAIELLSNYLET.QKTKIIFKKII.KKF......
C5DHP7_LACTC/601-679 ...................EREITVDAKIKDVE.....DFTNKLVVPLKSGFDIETSV...................KGSTVTLT.YSE.AKVPLMKKARDILRAYLSS.KGMQVVAEKELdRN-s.....
Q753Y6_EREGS/606-681 ...................ELEITITSPIVDTV.....DFCNSIVVPF-LAMGLIVTT...................ADCLIRFT.YQE.-GNKSVTYALDILREYLRK.INVTIMDKSFI.RSW......
A0A0C7N1X6_9SACH/600-678 ...................ERLITLDNSLSDTV.....DFSNKVVASLRKVLNIEATL...................EGKSLRLN.FVG.LDDKQISKALDIVEAYMDT.KNVRIKADEKL.---dlrs..
A0A7H9B461_ZYGMR/639-715 ...................ETELHLNKELDLNE.....EFYNFLVFPFKHTMKIEISA...................HKNLLRMT.YQE.-GNLLLNKAFTILASWFKS.KDLEVVGKEVV.RDF......
A0A7H9HRC1_9SACH/621-697 ...................ERELKLNKPIKPTD.....DLYNSIVVPFKHVMQIEVTF...................SKSTVRLT.YEQ.-GNSSLPKAIEILTDYLKS.LNLRIVSKEVI.VDF......
J7S6G3_HUIN7/631-695 .............aaenkl--------------.....AITNEIIMPFQRIWKSIIIQ...................GKNTLSMT.YNQ.--EEDLVHQLDVLSEYLLS.RDIELVET---.---vkv...
A0A5E8BZX7_9ASCO/757-852 .....dyefkvaysskfhe---------LVNEDq...gEFYQKVVVPFRIALKIETLVnekpe........ytseeaPYHQILLS.FAQ.ENSVGLEDAIQVLTAYLRD.KGLDIIDRG--.---eyhvd.
G8Y8D3_PICSO/678-755 ................rfa-------QSISTHN....sEFFQKIITPFRMLLDVEISTes...............vrSQHEIVLSsYSQ.---ENLDVAICDLTHYLRD.KDFLILDKSYL.---slqp..
A0A1E4RJ48_9ASCO/667-750 ..............kfnel---------INESN....kEFKENIIIPFRLMLGIELVInevs...........iddsSCHQIILS.FWGkQSDKHIQMAINDLTLYLRE.KKFLIMDKSFY.---kfn...
G8ZWI8_TORDE/622-698 ...................ERELKVNKPISLTS.....DIYNSIITPFKQNMKIEATF...................SENTVRLT.YEQ.-GNSSVTSAMDLLTNFLKE.RNLRILSKDVI.VDF......
I2GWY6_HENB6/645-727 ...................EKELILSSKLNIDDpklfiKWHNEIIIPLKYSLNTEVTV...................SEKLIRLT.YHK.DNDINVRQSIDLLNEYLLK.QNNSIKERRNI.EDF......
M3IGS7_CANMX/658-754 ...yefkvtfnpgkyedif---------ITNRQ.....DFENQIIIPFKILLGIEVMVnespiy.......nengsgNHHQFILS.YFE.ENKDGLDKAIVSLTLFLRE.RGFLITEKREM.---efn...
A0A642V042_DIURU/631-712 .........lyadhfagas-------------G.....EFFSRIVVPFRIHLAVEVVVnhtp..........lygdsDDHQIILS.YY-.-DDYAVQTAINDLTQYLRE.KKFSILEKK--.---pfvyd.
G8BUT5_TETPH/633-709 ...................EIIFDLETTIKDEN.....DFYNSVIIPFNRVYNIIITL...................QKNHVTLT.YNK.-NNSLLEKCIEELEKYFLN.NKLKITKREQI.KDF......
G8JVC3_ERECY/607-682 ...................ELEVIITSPIIDII.....GFSNSIIVPF-LAMNIIVTT...................TDRLIRFT.YKE.-GNKSISYALDILRDYLKK.INVTIMDKSFI.NSW......
C4YAL7_CLAL4/703-793 ....yefqltycpgkfeel---------ISHKN....qEFRDKIVIPLKLLLDIEIDFftll..........qaqpcFHQLILSS.Y--.-DEKNLGVAVQIMTHFLRE.KQFLIINKQEL.K--te....
G3AQM9_SPAPN/633-723 ....efkltlnpelfretf---------VSNNQ.....EFEEKVIIPFKILLGIELSVnksy..........vselqHHHQIILS.Y--.YNANSLQAAIHSLTSYLTE.KGFIISEKQEV.---nid...
A7TRZ9_VANPO/636-712 ...................ETEIYLNETIKDFD.....SFYNTVLVPFKRVMSIEVTF...................HEDMIRLT.YGQ.-DNKQFSKALLLLEEYLRS.INLRIVKQETF.H--gv....
C5DZE2_ZYGRC/626-702 ...................ETIVKLDQPMVLDH.....DFYNSIVIPFKHAMGIEVTA...................SSDTIRLV.YKR.-GNGSLNKSLEVLSDYVRS.HRRKVMTTELE.RNF......
A0A421JRI7_9ASCO/642-731 ......efkltfnqelfeq-------TFIVNKQ.....EFQEKVIIPFKILLGFEISInhth..........isnsqQYHQIILS.Y--.YNTSSLETAISSLSLYLEQ.KGFLIQD----.---gaqani
A0A8J5R2T8_9ASCO/656-758 nyefrltyspgkfdevfni-----------NKQ.....EFEDKISIPFKILLGIEVLVneasittn..ktqlhrqveGDHQIILC.YFD.NNKTNLTQAISSLTTFLRE.KGFLISDKKEM.---efd...
A0A1L0CV86_9ASCO/704-797 .....yefqltycpgkfde--------LINEHN....pTFREKVVIPFRLLLNTEIVTnlvagl.......vvlqasSYHQIILS.S--.YDDGNLRKAVSELTSYLRE.KRFLILDKKD-.---mdf...
B5RTH2_DEBHA/671-760 ......nyqfritycpgrf------DNEISRSN....kEFHDRIIIPFKVLLKIEVSVkt..............tenSHHEIMLS.Y--.FAPSDISVAINNLTLYLRE.KNFLILDKSYL.---qlnp..
A3GHF4_PICST/657-759 yefkvtmsvgkfeetfsgv-----------NKQ.....DFYNNVIVPFKILLGVEISVnstpiarsssnentassteDYHQIILS.Y--.YNEESLKPAIDSLTLYLRQ.HGFLILDKKAL.---efn...
A0A1E3PIV0_9ASCO/349-443 .................ef--KIALSSKFNDFVsesnsEFFRKIIVPFRTALKIHIQIllgeht.......ktpyspLYHRIILS.FSQ.SRSVGLEDAIQALTAYLRE.KDLDIIDRGEI.---kid...
A0A1G4MB99_LACFM/600-678 ...................ELEIYTDTQIMDIQ.....EFTNCVAVPLKKAMKIEVTI...................SKSLVRLT.YSD.LSESHTTRAIALIRDYLSS.KGIRITSEKKLgRDF......
A0A1E4SGF4_9ASCO/659-742 ..........kfeenfstl-----------NQS.....EFFNRIVIPFKILLGIEMIVnevpi........vngnsgDYHQIILS.Y--.FNEEHLEAGIRDLTIFLRE.KGFMILEKKP-.---lef...
A0A1G4JRJ2_9SACH/603-681 ...................ERQITLHSEISDVP.....EFINTVVATLKEALDIETTL...................DGRVIRIN.YCD.IDEKQIQRASGIVEAYIKS.KGMQVKSCKTI.---elgs..
J8Q2C8_SACAR/643-723 ...................EYELRTDKPIDARKe...yEFYNLIAVPFLQTMNIIVTF...................EKDLITFT.FAKdTSESILVKAIELLSDYMGT.QKRKVIFKKLI.KQF......
A0A1G4J0G8_9SACH/602-680 ...................EIELYISRPLGNVT.....SFFNDVVVPLKKVFQIEISF...................REDLIRLT.HAE.LKEGEETKAISLISSYLEE.NGIRLLKENHSrRNF......
#=GC seq_cons ..........................p.lsspp.....-FhNplllPF+hhhsIEloh...................spcpIhLo.Ytp..sspslppAlshLopYL+p.+shpIhc+p.l..........
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