GenomeNet

Database: Pfam
Entry: Zona_CL2
LinkDB: Zona_CL2
Original site: Zona_CL2 
#=GF ID   Zona_CL2
#=GF AC   PF22321.3
#=GF DE   Zonadhesin, second cohesin-like domain
#=GF AU   Bateman A;0000-0002-6982-4660
#=GF AU   Chuguransky S;0000-0002-0520-0736
#=GF AU   Sanchez-Pulido L;0000-0002-2300-8502
#=GF SE   ECOD:EF23112
#=GF GA   26.00 26.00;
#=GF TC   29.10 215.80;
#=GF NC   25.30 23.40;
#=GF BM   hmmbuild  HMM.ann SEED.ann
#=GF SM   hmmsearch -E 1000 --cpu 8 -Z 90746521 HMM pfamseq
#=GF TP   Domain
#=GF CL   CL0203
#=GF RC   Paper describing PDB structure 5fx8
#=GF RN   [1]
#=GF RM   27313058
#=GF RT   Crystal structure of linoleate 13R-manganese lipoxygenase in
#=GF RT   complex with an adhesion protein.
#=GF RA   Chen Y, Wennman A, Karkehabadi S, Engstrom A, Oliw EH;
#=GF RL   J Lipid Res. 2016;57:1574-1588.
#=GF DR   INTERPRO; IPR055019;
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   This entry represents the second cohesin-like domain present in
#=GF CC   zonadhesin protein from Pichia pastoris [1].
#=GF SQ   4
#=GS C4R3C4_KOMPG/169-322    AC C4R3C4.1
#=GS C4R3C5_KOMPG/803-962    AC C4R3C5.1
#=GS C4QZV5_KOMPG/1098-1257  AC C4QZV5.1
#=GS C4R3C5_KOMPG/352-506    AC C4R3C5.1
C4R3C4_KOMPG/169-322               SQPIKLSNAVTGGVEWFVDIPGA.FGDITNIDIST.VQTPG......T.....FDCSEVKYAVGSSLNEFGDFTPQDRTTFFSNSSSGEWIPITPASGLPVESFECGDGTISLSFAGELADDEVLRVSFLS.N.LADDVLEVQNVVNVDLTTA.DS...RKRALTSFVLDEPF
C4R3C5_KOMPG/803-962               SEPIKLIAGAADEVEWFIDIPGA.YNDLATIDISSdIDTNA......DwqnyfYDCSKLKYTIGKEFDQWGNFTAGSDGNQYSNTTNG-YVPITDSTGSPVAEVQCLLESISLSFTNPLAEDEVLRVVLHSsA.FRSGSLYMANTVNVDITTG.AL...VKRELFSYALDETY
C4QZV5_KOMPG/1098-1257             SEPIKLIAGAPDEVEWFIDIPSA.YSDLATIDISSdIDTND......NlqqyfYDCSKLKYTIGKEFDQWGNFTAGSDGNQYSNTTDG-YVPITDSTGSPVAEVQCLMESISLSFTNTLAEDEVLRVVLHSsA.FRRGSFTMANVVNVDITAG.GL...AKRELFSYILDENY
C4R3C5_KOMPG/352-506               TAPQKLILGGADAVNWVVDIPGApYPEITNINVGS.VIIENgwrykyI.....YDCENLKYIIASDFDEWNNVTT----------PVGDYLPLSSADS-SIADLECGLGGVSFSFTESLGENEVLRIFVPS.EaMVSGTLYMENIFTVDITTGsDSveiTKREEFSYTFDETY
#=GC seq_cons                      SpPIKLIsGusDtVEWFlDIPGA.YsDlssIDISS.lpTss......s.....YDCScLKYsIGp-FDpWGNFTstscss.aSNoosG.YlPITsuoG.PVA-lpChhtoISLSFTssLAEDEVLRVslhS.s.htsGoLhMtNlVNVDITTG.s....sKRELFSYsLDEsY
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