#=GF ID cIII
#=GF AC PF08134.16
#=GF DE cIII protein family
#=GF AU Lee SC;0000-0002-0504-0859
#=GF SE Short protein clustering
#=GF GA 25.00 25.00;
#=GF TC 25.80 65.60;
#=GF NC 24.70 22.00;
#=GF BM hmmbuild HMM.ann SEED.ann
#=GF SM hmmsearch --cpu 4 -Z 81514348 -E 1000 HMM pfamseq
#=GF TP Family
#=GF RN [1]
#=GF RM 8990286
#=GF RT The HflB protease of Escherichia coli degrades its inhibitor
#=GF RT lambda cIII.
#=GF RA Herman C, Thevenet D, D'Ari R, Bouloc P;
#=GF RL J Bacteriol 1997;179:358-363.
#=GF DR INTERPRO; IPR012995;
#=GF DR SO; 0100021; polypeptide_conserved_region;
#=GF CC This family consists of the cIII family of regulatory proteins.
#=GF CC The lambda CIII protein has 54 amino acids and it forms an
#=GF CC amphipathic helix within its amino acid sequence. Lambda cIII
#=GF CC stabilises the lambda cII protein and the host sigma factor 32,
#=GF CC responsible for transcribing genes of the heat shock regulon
#=GF CC [1].
#=GF SQ 10
#=GS K7P848_9CAUD/19-55 AC K7P848.1
#=GS K7P6P9_9CAUD/2-38 AC K7P6P9.1
#=GS B7UN84_ECO27/2-38 AC B7UN84.1
#=GS K7PJJ0_9CAUD/19-55 AC K7PJJ0.1
#=GS Q77W93_BPHK7/2-38 AC Q77W93.1
#=GS K7PHK2_9CAUD/2-38 AC K7PHK2.1
#=GS H5UWI6_ATLHE/2-38 AC H5UWI6.1
#=GS A0A7L7SY42_9CAUD/19-55 AC A0A7L7SY42.1
#=GS A0A220NRR4_9CAUD/2-38 AC A0A220NRR4.1
#=GS A7MI59_CROS8/2-38 AC A7MI59.1
K7P848_9CAUD/19-55 MHFQLAGSGVMSAFYPHESELSRRVKQLIRAAKKQLE
K7P6P9_9CAUD/2-38 MHFQLAGSGVMSAFYPHESELSRRVKQLIRAAKKQLE
B7UN84_ECO27/2-38 MHFQLAGSGVMSAFYPHESELSRRVKQLIRAAKKQLE
K7PJJ0_9CAUD/19-55 MHFQLAGSGVMSAFYPHESELSRRVKQLIRAAKKQLE
Q77W93_BPHK7/2-38 MHFQLAGSGVMSAFYPHESELSRRVKQLIRAAKKQLE
K7PHK2_9CAUD/2-38 MHFQLAGSGVMSAFYPHESELSRRVKQLIRAAKKQLE
H5UWI6_ATLHE/2-38 MHLQLAGSGVMSAYYPPESELHRKIRQLIRAAMLRLK
A0A7L7SY42_9CAUD/19-55 MHFQLAGSGVMSAFYPHESELSRRVKQLIRAAKKQLE
A0A220NRR4_9CAUD/2-38 MHFQLAGSGVMSAFYPHESELSRRVKQLIRAAKKQLE
A7MI59_CROS8/2-38 MQLSLSGGGIMSAYYPTESELSKRFRRLIRAARKQLE
#=GC seq_cons MHFQLAGSGVMSAFYPHESELSRRVKQLIRAAKKQLE
//
