KEGG   Pseudomonas frederiksbergensis: PFAS1_18660
Entry
PFAS1_18660       CDS       T04786                                 
Name
(GenBank) cyclic nucleotide-binding protein
  KO
K10914  CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
pfk  Pseudomonas frederiksbergensis
Pathway
pfk02020  Two-component system
pfk02024  Quorum sensing
pfk02025  Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:pfk00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PFAS1_18660
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PFAS1_18660
   02025 Biofilm formation - Pseudomonas aeruginosa
    PFAS1_18660
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pfk03000]
    PFAS1_18660
Transcription factors [BR:pfk03000]
 Prokaryotic type
  Helix-turn-helix
   CRP/FNR family
    PFAS1_18660
SSDB
Motif
Pfam: cNMP_binding LpxB
Other DBs
NCBI-ProteinID: APV43190
Position
complement(4001478..4001951)
AA seq 157 aa
MSEPTLLNNEIRDWLMDCGLFDQLLPADFATASGYFSISTIAQGEEIFHEGDAGSFMCII
HTGQVAVQKTNSDGHLVTMATLRSGRAFGEMAVLDGERRSASCVAASNCQLLNLGKDSLE
KMLNDAPKIAAKIIRALAVSLSKRLRMADGQLLSQQV
NT seq 474 nt   +upstreamnt  +downstreamnt
atgtcagaaccgaccttactgaacaacgaaattcgcgactggctgatggactgtggcctg
ttcgatcaactgctgccggcggacttcgccacggcttcgggctatttcagcatcagcacc
attgctcagggcgaagagattttccatgagggcgatgccggcagcttcatgtgcatcatc
cacaccggccaggtggcggtgcagaaaaccaacagcgacgggcacctggtgaccatggca
acgttgcgcagcggtcgggcgttcggcgaaatggccgtactcgacggcgaacgccgctcg
gccagctgcgtggccgccagcaattgccagttgctcaacctgggcaaggactcgctggaa
aagatgctcaacgatgcgccgaaaatcgccgccaaaatcatccgcgcccttgccgtttcc
ctctccaaacgcttgcgcatggccgatgggcaactgctctcgcagcaggtttaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (4)   

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