KEGG   Pseudozyma flocculosa: PFL1_00139
Entry
PFL1_00139        CDS       T03141                                 
Name
(RefSeq) hypothetical protein
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
pfp  Pseudozyma flocculosa
Brite
KEGG Orthology (KO) [BR:pfp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pfp03041]
    PFL1_00139
Spliceosome [BR:pfp03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    PFL1_00139
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    PFL1_00139
SSDB
Motif
Pfam: MA3 MIF4G HEAT_5MP1_2 Cnd1
Other DBs
NCBI-GeneID: 19314273
NCBI-ProteinID: XP_007875827
Position
Unknown
AA seq 939 aa
MSSKDSPDARSPSPARSPSPSRPASASPSPARAPASAEPSPQQKRKRSASFSSASSSSSR
SDSRSPPPRSRRRRSSRSPDARAKDDGRSSRALVAAAKREEEDKATAAEKRTAEKGEQLR
SALAKLSATKAGGAYIPPARLKALMAEAAAADPGSVEYQRMSWDALKKSITGLVNKVAAD
NIKNIVPELFGGANLIRGRGLFCRSIMRAQGLSLPFTPVFAALAAIVNTKLPMVGELLVT
RLVSQFRRSFKRNDKPVCNSTAMFIAHLVNQRVAHELLALEILVLLLEKPTDDSVEIAVS
FMREVGAFLAEEAPKANNSIFDRFRAVLYEGEISKRVQYMIEVLSQVRRDGFKDNPRIPE
ALDLVEEDDQITHRIGLDDELNVEEGLNVFKKDPDFLDNEEKYREIKAEILGEDEDSDEG
SSGSSSGDESDSESSDSDDAEDLQAKVDIQDRTETNLVNLRRTIYLTIMSSLDFEESIHK
LLRLDIKEGQEIELCNMIVECCSQERTYSKFYGNMGERLCKLNRIWSQCFEEGFRNYYDT
IHRYETNRLRNIARFFGNLVATESISWACFEIVHMNEEDTTSSSRIFIKILFQELQQQLG
LKELATKFKEPSMQEYWTGLFPTDNPKNTRFSINYFTSIGMGVLTEGMREHLKNAPKLLM
AQRQAALKAKGRGTDSDTDTDSSSDLSSSSLSSSTLSDSSRSYSSRSYSSRSRSRSRSRS
RSRSASYSRSPSPRRRRGRSRSRSYDSRSRSRSYSYSRSRSRSRSYSSRSRSYSRSRTPP
RRSNGRSRGRSPSRSRSRSRLRSRSYTPPPAAPRDRGRSYSRSPPPAKRPTRDRSLSASR
SPSPPPRQEYGRERPNGKGKERSLSPAREPRRDGGGRRDDDRYDAPRAERRERYDDRYPP
PPRGGGDRYDGRGGRRPEYDEGSYSRGRERYDDPRDRRR
NT seq 2820 nt   +upstreamnt  +downstreamnt
atgtcgtccaaggactcacccgatgcacgctcgccctcgcccgcacgctcgccctcaccc
tcgcgcccggcctccgcatccccctctcctgcacgcgccccggcctcagcagagccatcg
ccacagcagaagcgaaagaggtccgcctccttctcctcggcctcatcttcttcgtcccgc
tccgactcgcgctcacctccgccgcggtccaggcggcgcagatccagtcgctcgcccgac
gcccgcgcaaaggatgacgggcgcagcagccgcgccctcgtggctgcggccaagcgcgag
gaggaggacaaggcaacagcggcagagaaacgcacagccgaaaagggcgagcagctgagg
tcggcgctcgccaagctctccgcgaccaaggctggtggagcgtacatcccgcccgcccgc
ctcaaggcgctcatggccgaggcggccgccgcagacccgggtagcgtcgagtaccagcgg
atgagctgggacgcgctcaagaagagcatcaccggtctcgtcaacaaggtcgccgccgac
aacatcaagaacatcgtccccgagcttttcggcggcgccaacctcatccgaggccgcggc
ctcttctgccgctccatcatgcgcgctcagggcctctcgctgcccttcacgccagtgttt
gccgccctcgccgccatcgtcaataccaagctgccgatggtgggcgagctgctggtgacg
cgcctcgtctcccagttccgcaggtcgtttaagcgtaacgacaagcccgtctgcaactcg
accgccatgttcatagcccatctggtcaaccagcgcgtggcgcacgagctgctcgccctc
gagatcctcgtcctgctgctcgagaagcccacagacgacagcgtcgagatcgccgtcagc
ttcatgcgcgaggtcggcgccttcctcgccgaagaggcgcccaaggccaacaacagcatc
tttgaccgcttccgcgccgtcctgtacgagggcgagatcagcaagcgggtccagtacatg
atcgaggtgctctcccaggtgcgccgcgacggcttcaaggacaacccgcgcatccccgag
gccctcgacctggtcgaggaggacgaccagatcacgcaccgcatcggtctcgacgacgag
ctcaacgtcgaggagggcctcaacgtgttcaagaaggaccccgacttcctggacaacgag
gaaaagtaccgcgagatcaaggccgagatcctgggcgaggacgaggacagcgacgagggc
agctcggggtcgtcgtcgggcgacgagtcggacagcgagagcagcgacagcgacgacgcc
gaggacctgcaggccaaggtcgacatccaggaccggaccgagacgaacctcgtcaacctg
aggaggaccatctacctgaccatcatgtcgtcgctcgactttgaggagagcatccacaag
ctgctgcggctggatatcaaggagggccaggagatcgagctgtgcaacatgatcgtcgag
tgctgctcgcaggagcgcacctacagcaagttctacggcaacatgggcgagaggctgtgc
aagctcaaccgcatctggtcgcagtgcttcgaggagggcttccgaaactactacgacacg
atccaccggtacgagaccaaccggctgcgcaacattgcgcgcttctttggcaacctggtg
gcgaccgagagcatcagctgggcgtgctttgagatcgtccacatgaacgaggaggacacc
acgagcagctcgcgcatctttatcaagatcctcttccaggagctgcagcagcagctgggc
ctcaaggagctggcgaccaagttcaaggagcccagcatgcaagagtactggaccggcctc
ttccccaccgacaaccccaagaacacgcgcttctcgatcaactactttaccagcatcggc
atgggcgtcctcaccgagggcatgcgcgagcacctcaagaacgcgcccaagctgctcatg
gcccagcgccaggcggcgctcaaggcaaagggccgcggcaccgacagcgacaccgatacc
gattcgtcgagcgacctgtcgagcagctcgctcagctcgtcgacgctcagcgacagcagc
cgctcctactcttcgcgatcctactcgtcgaggtcgcggtcgaggtctaggtcgaggtcg
aggtcgagatcggcgagctactctcgctccccgtcgccgcgcaggaggcggggtcggtcg
cggtcccgctcgtacgactcgcgctcgaggtccaggagctacagctactctcggtcccgc
tcgcgctcgcggtcgtacagcagcaggtcgaggtcttactcgcgctcgaggacgccgcca
aggcggtccaacggcagatcaaggggtcgttcgccttcccgatcgcgctcgcgctcgagg
ttgaggtcgaggtcctacaccccgcctcctgccgcccctcgcgatcgcggcagatcgtac
tcgcgttcgccgccgcccgccaagcgcccaacccgagaccgatctctgtccgcctctcga
tcaccatctccgccaccgcggcaggagtacggacgggagaggccgaatgggaaaggcaag
gagcgctcattgagccccgcccgcgaaccgaggcgggacggaggcggaaggagggacgac
gaccgctacgatgcgccccgtgccgagcggagagagaggtacgacgaccgatacccgccg
ccacctcgcggaggcggagatcggtacgatggcaggggcggtaggcggccagagtacgac
gagggatcgtactcgaggggcagggagaggtacgacgatccgagagatcgtcgtcgttga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (9)   

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