KEGG T09293: 126370081

Pectinophora gossypiella (pink bollworm): 126370081

Entry

126370081         CDS       T09293

Name

(RefSeq) pre-mRNA-splicing factor CWC22 homolog

K13100

pre-mRNA-splicing factor CWC22

Organism

pgw Pectinophora gossypiella (pink bollworm)

Brite

KEGG Orthology (KO) [BR:pgw00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pgw03041]
    126370081
Spliceosome [BR:pgw03041]
Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    126370081
Complex C
   U4/U6.U5 tri-SnRNP related factors
    126370081

SSDB

Motif

Pfam:

MA3 MIF4G SR-25 CCDC106 BUD22

Other DBs

NCBI-GeneID:

126370081

NCBI-ProteinID:

XP_049870757

Position

1:16920266..16925825

AA seq 1099 aa
MDDDNKDSKRKKNKHDEEDEYRKERGPKRARSRSRSPADRRDKESRRKRRHSRSESPEKR
SRANRQQDEEAKEPEVKKEAPVRKNKETDMLNTRTGGAYIPPARLRMMQAQITDKSSMAY
QRLAWEALKKSIHGFINKINVGNIGIIIKELLKENIVRGRGLLCRSVIQAQAASPTFTNV
YAALVAAVNSRFPNIGELLLKRLVIQFKRGFKRNDKAICISSASFIAHLVNQRVAHEILA
LELLTLLVESPTDDSVEVAIAFLKECGQKLTEVSSKGCNAIFEMLRNILHEGQLDKRVQY
MIEVMFQVWKDGFKDHPAVVEELELVPEEEQFTHLLMLDDATDAMDILNVFKFDEKYEEN
EQKYKTLSKEILGSDADTDDEDGSGESGSEDDDEEEEEETSEEQKMTIIDNTETNLVALR
RTIYLTINSSLDFEECAHKLMKMQLKPGQEIELCHMFLDCCAEQRTYEKFYGLLAQRFCN
INKIYIGPFEEIFKDSYSTAHRLDTNRLRNVSKFFAHLLFTDSISWEVLECVRLNEEDTT
SSSRIYIKILFQELAEYMGLKKLNDRLKDPTLQEAFQGVFPRDNPKNTRFSINFFTSIGL
GGLTDELREHLKQMPKNVPPPVTEINLDSDSSSDSSSDSSDSSSASSDSSSSSESEDDSN
KKKKKKDKKSKEGKKKNKDKAPETPKDPEPADKVERWGHDGFYDTYGKDARRADPRQERD
GEFLRPFDRRPTRPDDRRSRDERNGDSRQEERRRNDREDDRRRDDRNEDREDSRKKRDDR
DTRRDDDYRSRKEEDRPRREEDRSRKEEDRSRREEDRSRREEDRPRREDDRARRDQDKLR
DDDRSRKEENRSRRDDDRSRREENRSRGDDERSRREENRSRGDDDRSRREENRSRGDDER
PRKEENKSRDEDRSRRDENGSRRDDDRSRRDEEKPRKDNRDDDRSRRDENRSRRDEERSR
KEEIRREESDDDRKKRNKKNKRDDQNTESEEDSRSKSKKLKNKKKKSKESDSEDDSRSRR
HGKENRNKDTDTESSSSSSDSDSSSSDSSDDGRSKKRDKRKGKGRSKKDKTKSNDDAGWD
IRRASSIRREVTVGRYWDN

NT seq 3300 nt +upstreamnt +downstreamnt
atggatgacgacaacaaggatagtaaacgcaagaaaaataaacatgatgaggaagatgaa
tatcgcaaagaaagggggcctaaaagagcacgatctcggtcgcgatcgccggccgatcgt
cgtgacaaggagtccaggcggaaacgcaggcattcacggtcagaatctccagagaaacgt
tctagagcaaataggcaacaagacgaggaggcaaaggaaccagaagtaaaaaaggaggcc
cctgtgcgaaaaaacaaagaaacagacatgttaaatacaagaactggtggtgcttatatc
cctccagcgcgccttcgcatgatgcaagcacagatcacagataaatcgtcaatggcttac
cagcgtctagcctgggaagctctaaaaaaatctatacatggattcattaacaagattaac
gtaggtaacattggcattattattaaagaattgttgaaggagaatatagtccgtgggcga
ggtttgctgtgtcgttctgtgatccaggcacaggcggcgtctcctacattcactaacgtc
tatgcggccctagtagcggcagtcaactctcgttttcccaatatcggagagttgctactg
aaaagattggtaatacagttcaagagaggattcaaacggaacgacaaagctatttgtata
tcctctgcttcatttatagctcatcttgtgaaccaaagagtagcacatgaaattttggcg
ttagagctattaacattacttgtggagtcaccaacagatgattctgtggaagttgccata
gccttcttgaaggagtgtggacagaaactaactgaggtatcgtcgaaaggttgcaacgcc
atctttgagatgttgaggaatattcttcatgaggggcagttggacaagagggtgcagtac
atgattgaggtgatgttccaagtgtggaaggatgggttcaaagaccaccctgctgtggtt
gaggagttggaactggtgcctgaagaggagcagttcacacatctccttatgttggatgat
gctacagatgctatggatattctgaatgttttcaaatttgacgagaaatatgaagagaat
gaacaaaaatataagacgttgagcaaagagattcttggttctgatgctgacacagatgat
gaagacggttctggtgaaagtggcagcgaagatgatgatgaagaagaagaggaagaaact
agtgaagaacagaaaatgacaatcatagacaacacggaaacaaatctggttgctctgagg
aggactatttacttgactatcaactccagtttggactttgaggagtgtgcccataaactc
atgaagatgcaactgaagcctggccaagaaatagagctctgtcacatgttccttgactgc
tgtgctgagcagagaacatatgagaaattctatggcctcctagcacaacggttttgcaac
atcaataagatctacataggaccatttgaggaaatctttaaagactcatacagcaccgct
cacagactggacacaaacagactgaggaatgtaagcaagttctttgctcatcttctcttc
acggattccatcagttgggaagtgctagaatgtgttaggttgaatgaggaggatacaaca
agctccagccgtatttacatcaagattctcttccaagagctggcggagtacatgggtttg
aagaaactgaatgaccgtcttaaagacccgaccctgcaggaggccttccaaggcgtcttc
ccgcgagacaaccctaaaaatacgaggttctccatcaacttcttcacctccattggcctg
ggtggacttactgatgagctgcgtgaacacttgaagcaaatgccaaagaacgtgccgccc
ccggtgacggagatcaacctggacagcgactccagctccgactccagcagtgacagcagc
gacagcagctcggcctccagcgattctagctcctctagcgaatcagaagacgacagcaat
aagaagaaaaagaaaaaggacaagaaatctaaagagggtaaaaagaaaaataaagataag
gcgcctgaaactccgaaagaccctgaacctgctgataaagtagaacgatggggtcacgat
ggtttctacgatacctatgggaaggatgctcggcgggctgaccccagacaggagagagat
ggcgagttcctcagaccatttgacagacgtccgaccagaccagatgatagaaggagcagg
gatgaacgtaacggcgatagccgccaagaagagaggaggcgcaatgacagggaagacgac
aggcgcagggatgatagaaacgaagacagggaagattctagaaagaaacgtgatgataga
gacacacgtcgtgacgatgactacagatcgagaaaagaagaagatcgtccgaggagagaa
gaagatagaagtaggaaagaagaagatagaagtagaagagaagaagatagaagtagaaga
gaggaagataggcctaggagagaagacgatagggctagacgagaccaggataaacttagg
gatgacgatagatcaagaaaagaggagaataggtctaggagagatgacgataggtcaaga
agagaagagaataggtctaggggagatgatgaaaggtcaagaagagaggagaataggtct
aggggagatgacgataggtcaagaagagaggagaatagatctaggggagatgacgaaagg
cctagaaaggaggagaataagtccagagatgaagacagatccagaagagacgaaaacggg
tctcgtagagatgatgatagatctaggagagatgaagaaaagcctagaaaggataatagg
gatgatgacagatctagacgagatgaaaatagatcaaggagagacgaagaaagatctaga
aaagaagagataaggcgagaggagagtgatgacgaccgaaagaagagaaacaagaaaaat
aaacgagatgaccaaaacacggaatctgaagaggattctaggagtaaaagcaagaaatta
aaaaataaaaagaagaaaagtaaagagtctgacagtgaagacgattcgaggagtcgacgt
cacgggaaagagaatagaaataaagatacagacacagagtcaagcagtagtagcagtgac
tctgatagtagtagtagtgactcaagtgatgacgggcgaagcaagaaacgggacaaaagg
aaaggtaaaggaaggtctaaaaaagataaaaccaaatcaaacgacgacgctggctgggat
attagaagagcaagcagcatacgccgggaagttacagtcgggcgttactgggataactga

All links

Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (11)   

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