KEGG   Panicum hallii (Hall's panicgrass): 112880543
Entry
112880543         CDS       T07366                                 
Name
(RefSeq) nuclear poly(A) polymerase 1-like isoform X1
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
phai  Panicum hallii (Hall's panicgrass)
Pathway
phai03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:phai00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    112880543
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:phai03019]
    112880543
Enzymes [BR:phai01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     112880543
Messenger RNA biogenesis [BR:phai03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     112880543
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central
Other DBs
NCBI-GeneID: 112880543
NCBI-ProteinID: XP_025800996
Position
2:complement(55979479..55986176)
AA seq 746 aa
MSKVKNSNGYLGVTEPISLSGPTEKDLKQTAEVEKYLSDAGLYESQEEAVSREEVLGKLD
QTVKAWIKKATRISGYGEQFVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRNEY
FFTWLHDMLAEMPEVSELHPVPDAHVPVLGFKINGVSIDLLYANLAHAVIPEDLDLSQDS
ILHNVDEQTVRSLNGCRVTDQILKLVPNIPSFRTTLRFIRYWGKRRGVYSNVMGFLGGIN
WAILVGRICQLYPNASPSMLISRFFRVYSKWKWPNPVMLCHIEEGPLGLPVWDPRRNYRD
RGHQMPIITPAYPCMNSSYNVSVSTRHVMIQEFTRAFEICQAIDEGKADWDALFEPYPFF
ESYKNYLEVNITARNEGDLRNWKGWVESRLRTLVLKIERYSHEMILAHPYPRDFSDKSRP
LHCFYFMGLWRKQTAQAQEAEQFDIRGIVNEFKSNICAYQHWKEGMDIEVSHVKRRDIPL
FVFPGGVRPRSSRTAHKNNRTVPACDVSAGQVGNVLGTVSISDVQPLPYKGSYTKPEPDY
SGCVQLPGSTSVLPTSLPNKEALNGHANFHAESVEREHPEHHQESTFAPVQNDVCHVVKQ
HNSLLPNSNNGLQSYGFGSSLNSSQRECADSAANNLLSLSPAIPAASDELDELTSYHQVK
DNQKAVNANQRPSLEGCSEDNLEQTSSVKPQDSNLLKRKANEELEPLELAAPSVGAVPAS
TTTAPRKPLRLRLTTLAKPKPPEGSS
NT seq 2241 nt   +upstreamnt  +downstreamnt
atgtcgaaggtgaagaacagtaatggttatcttggcgtcaccgagccgatctcactgagt
ggaccgactgagaaggatcttaagcaaactgctgaggtcgaaaagtacctttcagacgca
ggcctgtatgagagccaagaggaagctgtctcgcgagaagaggttttaggcaagctggac
cagactgtgaaagcgtggattaagaaggctaccaggatcagtgggtatggagagcaattt
gtgcatgaagcgaatgcaaagatctttacgtttggttcataccgtcttggggtacatggt
cctggtgcagacattgatacactatgtgttggtccaagacatgcaactcgaaatgagtac
ttcttcacgtggcttcacgatatgctagctgagatgccagaagtttcggagctacatcca
gtaccagatgctcatgtgcctgttctgggattcaaaattaatggggtctctattgacctt
ctgtatgctaaccttgctcatgcagtgattcctgaggacctagatctttctcaggactcg
atactgcataatgttgatgaacagactgttcgtagtctaaatgggtgtcgggttactgat
caaattttaaagttggttccaaacattccgagttttcgcacaaccttaagattcataaga
tattggggaaagcgccgcggagtttactcaaacgttatgggatttctaggtggtataaac
tgggcaattcttgttggtcgcatctgtcaactgtacccaaatgcatcacctagcatgttg
atatctcgttttttccgagtctacagcaagtggaagtggcctaatcctgttatgctttgc
catattgaggagggtcctcttggtctccctgtgtgggatccaagaagaaactacagagac
aggggccatcaaatgcctattattacacctgcttacccttgcatgaattccagctataat
gtatctgttagtactaggcatgtgatgatccaagaattcacacgagcgtttgagatttgc
caggccattgatgaaggaaaagcagactgggatgcattgtttgagccatatccatttttt
gaatcatataaaaattatctagaagttaatatcacagcgagaaatgaaggtgacctcagg
aattggaaaggctgggtggaatctcgccttcgcactcttgtattaaagattgaacgatat
tcacatgagatgatcctcgcacatccgtatcccagagatttttcagacaaatcaagacca
ctacattgcttttacttcatgggtctttggagaaaacagacagcccaagctcaagaagct
gagcaattcgacatcaggggaatcgtaaatgagttcaagagcaatatttgtgcgtatcaa
cattggaaagaaggaatggatattgaagtatcccatgtaaaaagaagagatatccctttg
tttgtttttcctggtggagtgcgtcctcgttcttctagaacagcacacaagaacaatcgt
actgttccagcttgtgatgtttcagctggtcaggtaggaaatgtattgggcactgtcagt
attagtgatgttcagcctctaccgtataaaggcagctatacgaaaccagaaccagattat
tctggctgcgttcagttgccgggaagcacttctgtgttgcccactagtttaccaaataaa
gaagctttgaatggccatgctaattttcatgcagaatctgttgagcgtgaacatccagaa
caccatcaggaaagtacattcgctcctgttcagaatgatgtgtgccatgtagtcaagcaa
cataacagtttgctgcctaattcaaacaatggtttgcaatcatatgggtttggttcctct
cttaacagttcacaaagagaatgtgcagacagtgctgcaaacaacttgctgagtttgtcg
cctgctattccagccgcatctgatgaacttgatgagctgacatcttatcatcaagttaaa
gataatcagaaagctgtaaatgctaatcagaggccatctttggaggggtgttctgaagat
aacttggaacaaacatcctctgtgaagccccaagattctaatcttcttaagcgcaaagcc
aatgaagagcttgagccacttgagcttgctgccccatcagttggagctgttcctgcatcg
acgaccactgccccaagaaaaccacttagattgaggttgacgactttggcaaaaccgaag
ccacctgaaggaagttcctga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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