KEGG   Panicum hallii (Hall's panicgrass): 112885037
Entry
112885037         CDS       T07366                                 
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
phai  Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:phai00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:phai03041]
    112885037
Spliceosome [BR:phai03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    112885037
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    112885037
SSDB
Motif
Pfam: MA3 HEAT_5MP1_2
Other DBs
NCBI-GeneID: 112885037
NCBI-ProteinID: XP_025806494
Position
3:4374220..4382200
AA seq 795 aa
MAATASPAASPPRRRHSHRDDDSPRHRKRRVSPSPPRSPSPGADADRRRRSRGSPPEPDR
RRRGGDAEPSEEKENGHAKPGRNEEGDDRPPRRSRVSDGEEDGDRRRRRARVSDDEKEDG
RRRRRARDSDEERDDRRGKRNRERERDSRRSRRRSPSSESGSSPDDRRRRRHRRDEGSRR
RDDRRRRDDDRGERRRSPEKREPTPPLPPPPPLLPEMIPGRTGGIYIPPFRMAQMLREVE
DKSSPEYQRLTWDALKKSINGLVNKVNATNIKNIVPELFAENLVRGRGLFCQSCIKSQMA
SPGFTDVFAALVAVVNTKFPEIGRLLLVRVVLQLKRAYKRNDKPQLLAATKFIAHLVNQV
VAHELVALELLTVLLENPTDDSVEVAVGFVKECGAMLQDLSPQGLHAIFERFRGILHEGE
IDKRVQFLIEGLFAIRKAKFQGFPAIRPELDLVEQEDQFTHEISLEDDLDPETNLNVFRA
NPNFVEDEKAYENLKRSILGAESSEDEEGSDAASDDEDEEESDEEEDEEQMEIRDRTETN
LVNLRRTIYLTIMSSVDFEEAGHKLMKIKLEPGQEMELCIMLLECCSQERTYLRYYGLLG
QRFCMINKVYQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLAYIRLT
EEDTTSSSRIFIKILFQELSEHLGIRLLNERLNDPNMQGSFESIFPKDHPKNTRFSINFF
TSIGLGGITESLREYLKNMPRLIMQQQKPESSESESSGSESGSESSSSGSSSESESESSS
DDGDRRRSKKRRKRT
NT seq 2388 nt   +upstreamnt  +downstreamnt
atggccgccaccgcctctcctgccgcatccccaccgcgccgccgccacagccaccgcgac
gacgactccccgcgccaccgcaagcgccgcgtgtccccgtccccgccccgctcgccatcc
cccggcgccgacgcggatcgccgccgcagatctagaggttcaccgcccgaacccgaccgc
cgccgccgcggcggcgacgccgagccctccgaggagaaggagaacggccacgccaagccc
ggaaggaacgaggagggcgacgaccgtcctccccggcgctctagggtttcggatggggag
gaggatggcgaccgccggaggcggcgcgctagggtttccgacgacgagaaggaggatggc
cgccgacggaggcgggctagggattcggatgaggagagggacgaccgccgcggcaagcgc
aaccgggagagggagagggacagccggcgcagccgccgccggagccccagctcggagtcg
ggatcctcacccgacgaccgccgccggcgccgccaccgccgagatgagggctcgaggcgg
cgggatgaccgaaggcgccgggatgacgaccgtggcgagcgccggaggagccctgagaag
agggagccgacgccacccctgcccccacctccgcctctgctgccggagatgatccctggg
cgcacgggcgggatctacatcccgccattccgcatggcccagatgctgcgggaggtggag
gacaagtcgagccctgagtaccagcggctcacttgggatgctctcaagaagagcataaac
gggttggtcaataaggtcaatgctaccaatatcaagaatatagtgccagagctctttgct
gagaaccttgttcgtgggcgggggctcttctgccaatcgtgcatcaagtcacagatggcc
tcacctgggttcaccgatgtttttgctgcacttgtcgcggtcgtgaataccaagttccct
gagatcggacggttgcttcttgttcgtgttgtgctccagctcaagagggcgtataagcga
aatgacaagccccaattgcttgcagcaaccaagttcatagcacacttggtaaatcaggtg
gtggcacatgagcttgtggcactggagcttcttacagtactccttgaaaatccaactgat
gatagtgttgaggtggctgttgggttcgtcaaagagtgtggggcaatgctacaggaccta
tccccacaagggcttcatgctatttttgaaagatttcggggtatacttcatgaaggagaa
atagacaagagagtgcaatttttgatcgaaggcctttttgcaattagaaaggctaaattt
cagggattccctgccatccgaccagagttggatcttgtggagcaggaggaccagtttaca
catgagatatcccttgaagatgacctagaccctgagaccaatctaaatgttttcagggca
aacccgaattttgttgaagatgagaaggcctatgagaacctaaagagaagcatcctggga
gcagaatcttctgaagatgaagaaggatcagatgccgcttctgatgatgaggacgaggaa
gaatctgatgaagaagaggatgaggaacagatggagataagggatagaacagagacgaat
cttgtgaatcttagaagaacaatatacttgactattatgtccagtgttgattttgaagaa
gctggtcacaagctaatgaaaattaaactcgagcctggtcaagagatggagctgtgtatt
atgcttctcgagtgttgcagtcaagagagaacataccttcggtattacgggctgctagga
cagcggttttgcatgatcaacaaagtgtaccaagagaactttgaaaaatgtttcgtccaa
caatattctatgattcatcgccttgaaacgaacaagttgaggaatgttgccaagttcttt
gcacatctgttggggaccgatgcactcccttggcatgttttggcttacatccggctgaca
gaggaagacacaacatcctcttcccgaattttcataaaaattctattccaggagttatcg
gagcacctgggcatacgcctactcaatgagagactgaatgatcctaacatgcaaggttcc
ttcgagtcaatcttccccaaggatcatccaaagaacacaaggttctccatcaatttcttc
acctccattggtcttggcggtatcactgagagcctgagggagtacttgaagaacatgcca
cgcctcataatgcagcagcagaagccggagtcatctgaatcagaatcaagcggatcagaa
tctggttcagaaagctccagctcagggtccagttctgagtctgagtcggaatcaagctct
gatgatggcgacagaaggcgaagtaagaagagaaggaagaggacttga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (8)   

Download RDF
DBGET integrated database retrieval system