KEGG   Panicum hallii (Hall's panicgrass): 112895474
Entry
112895474         CDS       T07366                                 
Name
(RefSeq) uncharacterized protein LOC112895474
  KO
K03504  DNA polymerase delta subunit 3
Organism
phai  Panicum hallii (Hall's panicgrass)
Pathway
phai03030  DNA replication
phai03410  Base excision repair
phai03420  Nucleotide excision repair
phai03430  Mismatch repair
phai03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:phai00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    112895474
   03410 Base excision repair
    112895474
   03420 Nucleotide excision repair
    112895474
   03430 Mismatch repair
    112895474
   03440 Homologous recombination
    112895474
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:phai01009]
    112895474
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:phai03032]
    112895474
   03400 DNA repair and recombination proteins [BR:phai03400]
    112895474
Protein phosphatases and associated proteins [BR:phai01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     112895474
DNA replication proteins [BR:phai03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    112895474
DNA repair and recombination proteins [BR:phai03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      112895474
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     112895474
SSDB
Motif
Pfam: CDC27
Other DBs
NCBI-GeneID: 112895474
NCBI-ProteinID: XP_025819213
Position
5:complement(57705453..57709823)
AA seq 515 aa
MAGGAVDQSLLDLLPQIHALFSDPFRVISYKWLSRNFSVSSNDAKRLLQEFVNKNGTDLQ
VIYSVSGWLKNNPQNYCVKLTSGPKLEEARQAFEDSCSVQVYSIQASIPKDTAVLWNPEF
VQAEELFNQPFDEENCLRDNRFCGVLNYFVKRTSSGKHVSSLPPKPINSAGAAAQSKPSI
APKKQFVTARQQDLPGLSSPKQGAGNKSEKDNSTVFDKAGNALVVKEPSVSAHANKNKAQ
NGKVIPGNGGSLSNMWGRASAKPKPPATTNSTAAAIVAATADAQICEKEEADADSSDDEQ
GIKYKRGSSSASDRKRRAVFDFSDDEEDDNIIRIASPELPKQHALDPVTETAEDTEANPK
NSENKDDLPNSVKDCSRGVDSEFTSECKTKSVSTVNHSGITLKEKSSDPPVNDSKQDSTA
EPASTSPKRRKVLKTRIDDRGREVTEVVWEGEASAGDKTEKNVTTTAASGATLSSKPQPA
ANSDKSRAPSKAAGSKKPAKAGTKQGSIMSFFKKV
NT seq 1548 nt   +upstreamnt  +downstreamnt
atggcgggaggggccgtggaccagtcgctgctcgacctgctgccccagatccacgccctc
ttctccgacccttttcgcgtgatttcatataaatggcttagtcggaacttctctgtatca
tcaaatgatgccaagaggttgcttcaggagtttgtcaacaaaaatggaacagacctccaa
gtgatttacagtgtttcagggtggctgaagaacaacccccaaaattattgtgtaaaactc
acttcaggcccaaaacttgaagaagcaagacaagcattcgaagattcttgttctgttcag
gtctacagtatccaggctagtattccaaaagataccgccgtactttggaatcctgaattt
gtgcaggcagaagaacttttcaaccagccttttgatgaagagaactgtttgagagataat
aggttttgtggtgttttgaattattttgtcaagcgaacatccagtgggaagcatgtgagt
tcattgccaccaaagcccataaatagtgctggggcagctgcacagtcaaaacctagtatt
gctccaaagaagcagtttgttactgctcggcagcaagatttgcctggactatctagtcca
aagcagggagcaggcaataagtctgagaaggataattccactgtatttgacaaagctggc
aatgctcttgttgtcaaagagccatcagtttctgcccatgctaacaaaaataaagctcag
aacggcaaggtcattccaggtaatggtggatcgctgtctaacatgtggggccgtgcatca
gcaaaaccgaagcctccagctaccactaattctacagctgcagcaattgttgcagctact
gctgatgcacaaatatgtgaaaaggaagaagcagatgcagatagcagtgatgatgaacag
ggaataaagtacaagaggggttctagcagtgcaagtgacagaaagagaagagcggtattt
gatttttcagatgatgaggaagatgacaatattataagaattgcatctcctgagctacca
aaacagcatgccctggacccagttaccgaaactgctgaagacactgaagcaaatccaaag
aactcagaaaataaagatgatttaccaaacagtgtgaaagattgttcaaggggggtggat
tctgagttcacttctgaatgtaaaactaaaagtgtcagtactgtgaaccattctgggatt
actttaaaggaaaagagcagtgatcctccagtcaatgatagtaagcaggattccacagct
gagcctgcttccacctcgccgaagagaagaaaggttttgaagacacgtatagatgatcgg
ggaagggaagttactgaggttgtttgggagggtgaagcttctgcaggtgacaaaacagag
aagaatgtgaccactactgctgcaagcggggcaaccctttcaagcaagccacagccggca
gcaaactctgacaagagcagagctccaagcaaggcagccggcagcaagaaacctgcgaag
gccggcaccaagcaagggagcatcatgtcattcttcaagaaggtatag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (7)   

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