KEGG   Panicum hallii (Hall's panicgrass): 112899741
Entry
112899741         CDS       T07366                                 
Name
(RefSeq) autophagy-related protein 13a-like isoform X1
  KO
K08331  autophagy-related protein 13
Organism
phai  Panicum hallii (Hall's panicgrass)
Pathway
phai04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:phai00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    112899741
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:phai04131]
    112899741
   03029 Mitochondrial biogenesis [BR:phai03029]
    112899741
Membrane trafficking [BR:phai04131]
 Autophagy
  Autophagosome formation proteins
   ULK complex
    112899741
   Atg1 complex
    112899741
Mitochondrial biogenesis [BR:phai03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-independent mechanism factors
    112899741
SSDB
Motif
Pfam: ATG13
Other DBs
NCBI-GeneID: 112899741
NCBI-ProteinID: XP_025824121
Position
7:complement(40596674..40600903)
AA seq 500 aa
MSGMSDSAGGGRAGAELMVEQFHLKVLHAVLAVRAPCPLAAAAAPAAASAFRKRDRWFHL
PLHDPPPPPEAADRLEPLAPGEPLVVDVLLSPAGVGAGAGAGGEVVERWTVACEPWPDAA
GGEEVAVNRAYKHCFTLLRSVYAVLRVLPAYRVFRLLCANHSYNYEMVHHVDTFAEPFSR
PQEAAMRSHRFIPVETQLGRLVVSVQYLPSLASFNLEITSLSPSRIIPDYVGSPAAEPMR
AFPASLTEATGSAFPPSYQLQRPHSWAPPVFWPYTPAQQVFYASPTPSPPHFPGGYLQKR
LTRGESAPMPIPQLVERRSPVHRQNTLPPPSPRRGDMGAAGAQESPSEMGRLIGRLSPRH
KGKDNKDESGRFSALSSCDSPRQDDLDDYPFFVDDVDPPVSQPGSSDGKETSDQAGSSSH
KSQDAQVGSLVYLLRNARPLRDPSYSLQTSRAESSEAASASSTTSRRTSDALEELQSFKE
IRERLQSRSSAKHQEPPGKP
NT seq 1503 nt   +upstreamnt  +downstreamnt
atgtccgggatgtccgactccgcggggggcgggcgcgccggcgcggagctgatggtcgag
cagttccacctcaaggtgctccacgccgtcctcgccgtgcgcgcgccttgcccgctcgcc
gccgcggcggcgccagcggcggcttcggcgttccggaagagggacaggtggttccacctc
ccgctacacgacccgccgccgccgcccgaggcggccgaccgcctggagccgctggccccc
ggggagccgctcgtggtggacgtcctgctgtcccctgccggcgttggagcgggagcggga
gcgggaggggaggtggtggagaggtggactgtggcgtgcgagccctggccggacgccgcg
ggcggcgaggaggtggccgtgaaccgggcgtacaagcactgcttcacgctgctcaggtcg
gtgtacgccgtgctccgcgtcctcccggcgtaccgcgtcttccgcctcctctgcgccaac
cactcctacaactacgagatggttcaccacgtcgacaccttcgccgagccgttctcgcgc
ccccaggaggccgccatgcgctcccaccgcttcatccccgtcgagacccagctcggccgc
ctcgtcgtctccgtccagtacctccccagccttgcctccttcaacctggagatcacctcc
ctttcgccctccaggataatccctgactacgtcggcagcccagccgccgagcccatgcgc
gccttcccggcctcgcttaccgaagccacgggctccgccttcccaccgtcctatcagctg
cagcgcccgcacagctgggctccgcctgtgttctggccgtacacgccggcacagcaggtg
ttttacgcctcgcccacgccctcgccgcctcattttccaggtgggtacctgcagaagcgt
ctcactaggggggaatcagcgccaatgccaataccgcagctggttgagaggaggagccct
gtgcaccgccagaacacgctgccaccgccatctccgagaagaggagacatgggggcagca
ggtgctcaagagtctccatcagagatgggccggttgattgggagattgtcacccagacat
aagggcaaggacaacaaagatgaatctggcaggttctctgcactctcctcatgtgattcc
cctcggcaagacgatctggatgattatccttttttcgtggatgatgttgatcccccagtc
tcccaacctgggagcagtgatgggaaggaaacaagtgatcaggcaggttcgtcgtcccat
aaatctcaagatgcacaagtcggttctctagtctacctgctgaggaacgcgcgtccactg
cgagatcctagctattcattacaaacatcaagggctgagtccagcgaagcagcctcagca
agctccaccacgtcccgtaggacatctgacgcacttgaggagctccagtccttcaaagag
ataagggagcgactgcagtcccggagcagcgcaaaacatcaagagccaccagggaaacca
tag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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