KEGG   Pedobacter heparinus: Phep_2408
Entry
Phep_2408         CDS       T00978                                 
Name
(GenBank) Heparinase II/III family protein
  KO
K19051  heparin/heparan-sulfate lyase [EC:4.2.2.7 4.2.2.8]
Organism
phe  Pedobacter heparinus
Brite
KEGG Orthology (KO) [BR:phe00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    Phep_2408
Enzymes [BR:phe01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.7  heparin lyase
     Phep_2408
    4.2.2.8  heparin-sulfate lyase
     Phep_2408
SSDB
Motif
Pfam: HepII_C DSE-like_N Hepar_II_III_C
Other DBs
NCBI-ProteinID: ACU04612
UniProt: C6XZB6
Structure
Position
complement(2800682..2803000)
AA seq 772 aa
MKRQLYLYVIFVVVELMVFTTKGYSQTKADVVWKDVDGVSMPIPPKTHPRLYLREQQVPD
LKNRMNDPKLKKVWADMIKMQEDWKPADIPEVKDFRFYFNQKGLTVRVELMALNYLMTKD
PKVGREAITSIIDTLETATFKPAGDISRGIGLFMVTGAIVYDWCYDQLKPEEKTRFVKAF
VRLAKMLECGYPPVKDKSIVGHASEWMIMRDLLSVGIAIYDEFPEMYNLAAGRFFKEHLV
ARNWFYPSHNYHQGMSYLNVRFTNDLFALWILDRMGAGNVFNPGQQFILYDAIYKRRPDG
QILAGGDVDYSRKKPKYYTMPALLAGSYYKDEYLNYEFLKDPNVEPHCKLFEFLWRDTQL
GSRKPDDLPLSRYSGSPFGWMIARTGWGPESVIAEMKVNEYSFLNHQHQDAGAFQIYYKG
PLAIDAGSYTGSSGGYNSPHNKNFFKRTIAHNSLLIYDPKETFSSSGYGGSDHTDFAAND
GGQRLPGKGWIAPRDLKEMLAGDFRTGKILAQGFGPDNQTPDYTYLKGDITAAYSAKVKE
VKRSFLFLNLKDAKVPAAMIVFDKVVASNPDFKKFWLLHSIEQPEIKGNQITIKRTKNGD
SGMLVNTALLPDAANSNITSIGGKGKDFWVFGTNYTNDPKPGTDEALERGEWRVEITPKK
AAAEDYYLNVIQIADNTQQKLHEVKRIDGDKVVGVQLADRIVTFSKTSETVDRPFGFSVV
GKGTFKFVMTDLLPGTWQVLKDGKILYPALSAKGDDGALYFEGTEGTYRFLR
NT seq 2319 nt   +upstreamnt  +downstreamnt
atgaaaagacaattatacctgtatgtgatttttgttgtagttgaacttatggtttttaca
acaaagggctattcccaaaccaaggccgatgtggtttggaaagacgtggatggcgtatct
atgcccataccccctaagacccacccgcgtttgtatctacgtgagcagcaagttcctgac
ctgaaaaacaggatgaacgaccctaaactgaaaaaagtttgggccgatatgatcaagatg
caggaagactggaagccagctgatattcctgaagttaaagactttcgtttttattttaac
cagaaagggcttactgtaagggttgaactaatggccctgaactatctgatgaccaaggat
ccaaaggtaggacgggaagccatcacttcaattattgatacccttgaaactgcaactttt
aaaccagcaggtgatatttcgagagggataggcctgtttatggttacaggggccattgtg
tatgactggtgctacgatcagctgaaaccagaagagaaaacacgttttgtgaaggcattt
gtgaggctggccaaaatgctcgaatgtggttatcctccggtaaaagacaagtctattgtt
gggcatgcttccgaatggatgatcatgcgggacctgctttctgtagggattgccatttac
gatgaattccctgagatgtataacctggctgcgggtcgttttttcaaagaacacctggtt
gcccgcaactggttttatccctcgcataactaccatcagggtatgtcatacctgaacgta
agatttaccaacgacctttttgccctctggatattagaccggatgggcgctggtaatgtg
tttaatccagggcagcagtttatcctttatgacgcgatctataaacgccgccccgatgga
cagattttagcaggtggagatgtagattattccaggaaaaaaccaaaatattatacgatg
cctgcattgcttgcaggtagctattataaagatgaataccttaattacgaattcctgaaa
gatcccaatgttgagccacattgcaaattgttcgaatttttatggcgcgatacccagttg
ggaagtcgtaagcctgatgatttgccactttccaggtactcaggatcgccttttggatgg
atgattgcccgtaccggatggggtccggaaagtgtgattgcagagatgaaagtcaacgaa
tattcctttcttaaccatcagcatcaggatgcaggagccttccagatctattacaaaggc
ccgctggccatagatgcaggctcgtatactggttcttcaggaggttataacagtccgcac
aacaagaacttttttaagcggactattgcacacaatagcttgctgatttacgatcctaaa
gaaactttcagttcgtcgggatatggtggaagtgaccataccgattttgctgccaacgat
ggtggtcagcggctgcccggaaaaggttggattgcaccccgcgaccttaaagaaatgctg
gcaggcgatttcaggaccggcaaaattcttgcccagggctttggtccggataaccaaacc
cctgattatacttatctgaaaggagacattacagcagcttattcggcaaaagtgaaggaa
gtaaaacgttcatttctattcctgaaccttaaggatgccaaagttccggcagcgatgatc
gtttttgacaaggtagttgcttccaatcctgattttaagaagttctggttgttgcacagt
attgagcagcctgaaataaaggggaatcagattaccataaaacgtacaaaaaacggtgat
agtgggatgttggtgaatacggctttgctgccggatgcggccaattcaaacattacctcc
attggcggcaagggcaaagacttctgggtgtttggtaccaattataccaatgatcctaaa
ccgggcacggatgaagcattggaacgtggagaatggcgtgtggaaatcactccaaaaaag
gcagcagccgaagattactacctgaatgtgatacagattgccgacaatacacagcaaaaa
ttacacgaggtgaagcgtattgacggtgacaaggttgttggtgtgcagcttgctgacagg
atagttacttttagcaaaacttcagaaactgttgatcgtccctttggcttttccgttgtt
ggtaaaggaacattcaaatttgtgatgaccgatcttttacccggtacctggcaggtgctg
aaagacggaaaaatactttatcctgcgctttctgccaaaggtgatgatggagccctttat
tttgaaggaactgaaggaacctaccgttttttgagataa

  All links  
Gene (63)   
   RefGene (61)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
3D Structure (4)   
   PDB (4)   
Protein domain (3)   
   Pfam (3)   
All databases (72)   

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