KEGG   Pseudopodoces humilis (Tibetan ground-tit): 102111524
Entry
102111524         CDS       T02921                                 
Symbol
PDGFRB
Name
(RefSeq) platelet-derived growth factor receptor beta
  KO
K05089  platelet-derived growth factor receptor beta [EC:2.7.10.1]
Organism
phi  Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04010  MAPK signaling pathway
phi04020  Calcium signaling pathway
phi04510  Focal adhesion
phi04518  Integrin signaling
phi04519  Cadherin signaling
phi04540  Gap junction
phi04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:phi00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    102111524 (PDGFRB)
   04020 Calcium signaling pathway
    102111524 (PDGFRB)
  09133 Signaling molecules and interaction
   04518 Integrin signaling
    102111524 (PDGFRB)
   04519 Cadherin signaling
    102111524 (PDGFRB)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102111524 (PDGFRB)
   04540 Gap junction
    102111524 (PDGFRB)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    102111524 (PDGFRB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:phi01001]
    102111524 (PDGFRB)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:phi04090]
    102111524 (PDGFRB)
Enzymes [BR:phi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.10  Protein-tyrosine kinases
    2.7.10.1  receptor protein-tyrosine kinase
     102111524 (PDGFRB)
Protein kinases [BR:phi01001]
 Receptor tyrosine kinases (RTK)
  PDGFR family [OT]
   102111524 (PDGFRB)
CD molecules [BR:phi04090]
 Proteins
  102111524 (PDGFRB)
SSDB
Motif
Pfam: PK_Tyr_Ser-Thr Ig_PDGFR_d4 Pkinase Ig_3 I-set VEGFR1-3_N_Ig-like ig Ig_2 Ig_VEGFR-1-like_5th V-set VEGFR-1-like_Ig-like C2-set_2 DUF4452 BACON_2
Other DBs
NCBI-GeneID: 102111524
NCBI-ProteinID: XP_005523627
Position
17:6624043..6655097
AA seq 1093 aa
MLCPTLKTCLWLLILTGLLEVTFGDSRLHIEPRDTELVLSLHSTFSLLCYGDRELVWERE
GQPLTASLEHRDGVFVSNLTLRNVTGHHTGEYTCTYSPEQAPEPAERRALYIYVPDPSLV
FLPAVTSEELFIFITGYTEAVIPCRVTNPQMQVTLYEKKVENPIPATYDPQQGFKGFFED
KTYFCRTFVDDQEVDSDTFYVYRIQVSSVNVSISAVQTMVRQGENVTVMCTVSGNELVNF
NWDYPRKQAGKAVEPVTDFLPGSTHEIRSILIIQNAELEDSGTYVCNVSEGYHEKTDRKD
ITVQVIEHGFVHFHTHLPSTVYAEVHKSHTILVEVEAYPQPSIVWLKNNKTLTMESSSEF
TITSRNLSETRYQTALVLVRVKQEEGGFYTIRASNDDDEQELSFHLQINVPAKVVDLKEN
SSASSGEQTVTCSAEGMPQPEISWSTCSDIKWCSSKGQPTRLLGNESAEIGVQTNASYHA
ERQLYRVNSTLQLHRVHEPLLLRCTVQNFLGTNSQDITLVPHALPFKVVIISVILALLVL
TVISLIILIVLWQKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDSTWEVPRDKLVLGR
TLGSGAFGRVVEATAHGLSHSRSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNI
VNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQSYGEKARREAELYGNTPKEDHV
HSHLSMSVESDGGYMDMSKDDSLDYVPMSDMKGEVKYADIESSNYGTPYELDSYSPSAPE
RTDRVTLINESPLLSYMDLVGFSFQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICD
FGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPY
PELPMNEQFYNAIKRGYRMSKPTHASDEIYSIMQKCWEEKFEIRPSFSQLVVLMGSLLVD
CYRKRYQQVDEEFMKSDHPAVVRTRPTIPVLNNARPAASSPSSSILYTAVHQNGGENDYI
IPLPDPKPEANCDLPQEASLSRASSVLNEANTSSTISCDSPLGLREDEEQESDPQPGCQE
PTTGHQEVEESFL
NT seq 3282 nt   +upstreamnt  +downstreamnt
atgctgtgccccactctcaagacatgtctctggctcctcatcctcactggtctgctggag
gtaacgtttggggacagcaggctgcacatcgaacccagagacactgagcttgtcctcagc
ctccacagcaccttctccctcctgtgctatggggacagggagctggtctgggaacgggag
ggacagcccctcactgcctcgctggagcacagggacggtgtctttgtcagcaatctcacc
ctcaggaacgtgacaggccatcacaccggggagtacacatgcacctacagccctgagcag
gctccagagccagcggagaggagagccctgtacatctacgttccagatccctccctggtt
ttcctccctgcagtcacctctgaagagctcttcatcttcatcacaggctacacagaggct
gtcatcccatgccgtgtgaccaacccacagatgcaggtcaccctctatgagaagaaggtg
gagaaccccatcccagctacatatgatccacaacagggatttaagggcttctttgaggat
aagacctatttctgccggacatttgtggatgaccaggaggtggattcagacactttctat
gtctacaggatccaggtgtcatcagtgaatgtctccatcagtgcagtgcagaccatggtg
cgccagggagaaaatgtcaccgtgatgtgcaccgtgagcggcaacgagctggtcaacttc
aactgggactatccccgcaagcaagcagggaaggctgtggagccagtgactgacttcctg
cctggatccactcatgagatccgctccatcctcatcatccagaacgcagagctggaggac
agtgggacctatgtctgcaatgtctccgagggctaccatgagaaaacggacaggaaagac
atcaccgtccaagtgatcgagcatggctttgtgcacttccacacccacctgcccagcacg
gtgtatgctgaggtccacaagagccacactatcctggtggaagtggaggcttatccccag
cccagcattgtgtggctgaagaacaacaagacattgaccatggagagcagcagcgagttc
accatcaccagcaggaacctgtcagaaaccaggtaccagacagctctggtgctggtgcgg
gtgaagcaggaagaaggaggattttacaccattcgggcttccaatgatgatgatgagcag
gagctctccttccatctgcagataaatgtgccagctaaagtggtggatctcaaggagaac
agcagtgccagcagtggggagcagacagtaacatgctctgctgaaggcatgccccagccg
gagatcagctggtctacttgcagcgacatcaaatggtgcagcagcaagggccagcccacc
cggctgctggggaacgagtcggccgagatcggcgtgcagaccaacgcctcgtaccacgca
gagcggcagctctaccgcgtcaacagcaccctgcagctgcacagggtgcacgagcccctg
ctcctcaggtgcactgtgcagaacttcctgggaaccaactcccaggacatcactctggtc
ccacacgccttgccattcaaggtggtcatcatttctgtcatcctggccttgctggtcctc
actgtgatctcactgatcatcctgatcgtgctgtggcagaagaaacctcgttatgaaatc
cgctggaaggtgattgagtcagtcagctctgatgggcacgagtacatctatgtggatccc
atgcagctcccttatgactccacctgggaggtgcccagggacaagctggtgttaggacgc
actctcggctccggtgcctttggtcgtgtggtggaggcaacagcccatggcctgagccat
tcaaggtccaccatgaaagtggcagtcaaaatgctcaagtccacagcccgcagtagtgag
aagcaagccctcatgtccgagctgaagatcatgagccacctgggacctcacctcaacatc
gtcaacttgctgggggcctgcaccaaaggaggacccatctacatcatcaccgagtactgc
cgctacggggacctggtggattacctgcaccgcaacaagcacaccttcctgcagtcctac
ggggagaaggcacggcgagaggcagagctctacgggaacacccccaaggaggaccatgtg
cacagccacctctccatgtctgtcgagagtgacggcggctacatggacatgagcaaggat
gactccttggactatgtgcccatgtctgacatgaagggtgaagtcaaatacgctgacatc
gagtcctctaactatggcaccccctatgagctggacagctactctccctcagctcctgaa
aggacagaccgggtgacgctgataaatgagtctccactcctcagctacatggacttggtg
ggcttcagcttccaggtggccaatgggatggagttcctggcttccaaaaattgtgtgcac
cgtgacctggctgccaggaatgtcctcatctgtgaggggaagctggtgaagatctgtgac
tttggcctggcgagggacatcatgagggattccaactatatctccaaaggcagtactttc
ttgcccctcaagtggatggctccagagagcatcttcaacaacctctacaccaccctgagt
gatgtatggtcttttgggattcttctttgggagatattcactctaggagggactccatac
cctgagctgcctatgaatgagcagttctacaacgccatcaaacgtggctatcggatgtcc
aaacccacccatgcctctgatgaaatctacagcatcatgcagaagtgctgggaggagaag
tttgagatcaggccatctttctcacagctggtggtgcttatgggaagcctcctggtggat
tgctacagaaagaggtaccagcaggtggatgaagagttcatgaagagtgaccaccccgct
gttgtccgcacaagacccaccattcctgttctgaacaacgcccgccctgctgccagctcc
cccagcagcagcatcctctacacagccgtgcaccagaacgggggagagaacgattatatc
atccctcttcccgaccccaaacctgaggcaaactgtgacctccctcaggaggcctccctc
agccgggccagctctgtgctgaacgaggccaacacatcatctacaatatcctgtgacagc
cctctgggcctccgggaggacgaggagcaggaatctgacccacaaccaggctgccaggag
ccaaccacaggacaccaagaggtggaggagagtttcctgtag

  All links  
Gene (14)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (14)   
   Pfam (14)   
All databases (38)   

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