KEGG   Phaeobacter sp. LSS9: D1820_14630
Entry
D1820_14630       CDS       T05617                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
phq  Phaeobacter sp. LSS9
Pathway
phq00010  Glycolysis / Gluconeogenesis
phq00020  Citrate cycle (TCA cycle)
phq00260  Glycine, serine and threonine metabolism
phq00280  Valine, leucine and isoleucine degradation
phq00310  Lysine degradation
phq00380  Tryptophan metabolism
phq00620  Pyruvate metabolism
phq00630  Glyoxylate and dicarboxylate metabolism
phq00640  Propanoate metabolism
phq00670  One carbon pool by folate
phq00785  Lipoic acid metabolism
phq01100  Metabolic pathways
phq01110  Biosynthesis of secondary metabolites
phq01120  Microbial metabolism in diverse environments
phq01200  Carbon metabolism
phq01210  2-Oxocarboxylic acid metabolism
phq01240  Biosynthesis of cofactors
Module
phq_M00009  Citrate cycle (TCA cycle, Krebs cycle)
phq_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
phq_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
phq_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:phq00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    D1820_14630 (lpdA)
   00020 Citrate cycle (TCA cycle)
    D1820_14630 (lpdA)
   00620 Pyruvate metabolism
    D1820_14630 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    D1820_14630 (lpdA)
   00640 Propanoate metabolism
    D1820_14630 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    D1820_14630 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    D1820_14630 (lpdA)
   00310 Lysine degradation
    D1820_14630 (lpdA)
   00380 Tryptophan metabolism
    D1820_14630 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    D1820_14630 (lpdA)
   00670 One carbon pool by folate
    D1820_14630 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:phq04147]
    D1820_14630 (lpdA)
Enzymes [BR:phq01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     D1820_14630 (lpdA)
Exosome [BR:phq04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   D1820_14630 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored FAD_binding_2 GIDA HI0933_like NAD_binding_8 DAO AlaDh_PNT_C Thi4 Lys_Orn_oxgnase FAD_binding_3 3HCDH_N UDPG_MGDP_dh_N Lycopene_cycl
Other DBs
NCBI-ProteinID: AXT36108
Position
complement(3060725..3062122)
AA seq 465 aa
MASYDVIVIGAGPGGYVSAIRCAQLGLKTAVVEGRETLGGTCLNVGCIPSKALLHSTHLL
HEAEHNFAHMGLKGKSPSVDWPQMKSYKEEVIGQNTGGIEFLFKKNKIDWIKGWASIPEA
GKVKVGDDTHEAKNIVIASGSVPSSLPGVEVDNDKGVVVDSTGALDLPKIPKKMVVIGAG
VIGLELGSVYARLGSDVTVVEYMDAVCPGMDKDVQRSFKRILEKQGLTFIMGAAVQGVEP
SKTKAKVKYQPKKGGDEEVIDADVVLVATGRKPYAEGLGLDALGVKMTERGQIATDAHWA
TNVKGVYAIGDVIEGPMLAHKAEDEGMAVAEVIAGKHGHVNYGVIPGVVYTTPEVATVGQ
TEDALKAEGRKIKTGKFMFMGNARAKAVHQAEGGFVKLIADKETDRILGAAIIGPGAGDL
IHEICVAMEFGASAEDLALTCHAHPTYSEAVREAALACGDGPIHS
NT seq 1398 nt   +upstreamnt  +downstreamnt
atggcatcctatgacgtcatcgtaatcggcgccggccccggtggctatgtcagcgccatc
cgctgcgcccagttgggcctcaagaccgcagtggtcgaaggccgcgaaaccctcggcggc
acctgcctcaacgtcggctgtatcccgtcaaaggccctgctgcattccacccacctactg
catgaagcggaacataacttcgcccatatgggtctgaagggcaaaagtccctcggtcgac
tggccgcagatgaaatcctacaaggaagaggtcatcggccagaacactggcggtatcgaa
ttcctgttcaagaagaacaagatcgactggatcaagggctgggcctccattcccgaggcc
ggcaaggtcaaggtgggcgacgacacccatgaggccaagaacatcgtaattgcctccggc
tcggtgccctcctcgctgccaggcgttgaggtcgataacgacaagggggttgtggtggac
agcaccggcgcgctggacctgccgaagatccccaagaaaatggttgtgatcggtgctggt
gtcatcggcctggaactggggtcggtctacgcacgtctgggatctgacgtgaccgtggtt
gaatatatggacgccgtttgccctggcatggacaaggatgttcagcgcagctttaagcgg
atcctcgaaaagcagggtctgaccttcatcatgggggctgcggtacagggggttgaaccg
tcgaaaaccaaggcaaaggtgaagtatcagccgaaaaaaggcggcgatgaagaagtgatt
gatgccgatgtggtgttggtcgccaccggtcgcaaaccctacgctgaggggctgggcctt
gacgctctgggtgtcaagatgaccgagcgcggccagatcgccaccgacgcccattgggcc
accaatgtcaaaggtgtctatgccatcggtgacgtcatcgaaggtcctatgctggcccat
aaggccgaagacgaaggcatggctgttgccgaggtgatcgcgggcaagcacgggcacgtc
aactacggcgtgatccccggcgttgtctacaccacacccgaggtggccaccgtaggccag
accgaagatgcgctgaaggccgaaggtcgcaagatcaagaccggcaagttcatgtttatg
ggcaatgcccgcgccaaggccgtgcatcaggccgaaggtggttttgtgaaactcatcgcg
gataaggaaaccgaccgtattctgggggccgccatcatcggtccgggcgctggcgacctg
atccatgaaatctgcgtcgcaatggaattcggcgcctctgctgaggatctggccctcacc
tgtcatgcgcatccgacctattccgaggccgtgcgcgaggcggccttggcctgcggcgac
ggtccgatccacagctga

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