KEGG   Pangasianodon hypophthalmus (striped catfish): 113531398
Entry
113531398         CDS       T05759                                 
Symbol
tubb4b
Name
(RefSeq) tubulin beta-4B chain
  KO
K07375  tubulin beta
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04145  Phagocytosis
phyp04517  IgSF CAM signaling
phyp04540  Gap junction
phyp04814  Motor proteins
phyp05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    113531398 (tubb4b)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    113531398 (tubb4b)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    113531398 (tubb4b)
  09142 Cell motility
   04814 Motor proteins
    113531398 (tubb4b)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    113531398 (tubb4b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:phyp03036]
    113531398 (tubb4b)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:phyp04812]
    113531398 (tubb4b)
   04147 Exosome [BR:phyp04147]
    113531398 (tubb4b)
Chromosome and associated proteins [BR:phyp03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     113531398 (tubb4b)
Cytoskeleton proteins [BR:phyp04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    113531398 (tubb4b)
Exosome [BR:phyp04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   113531398 (tubb4b)
  Exosomal proteins of colorectal cancer cells
   113531398 (tubb4b)
  Exosomal proteins of bladder cancer cells
   113531398 (tubb4b)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 113531398
NCBI-ProteinID: XP_026777940
Position
Unknown
AA seq 445 aa
MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
PRAVLVDLEPGTMDSVRSGPFGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFEEEAEEELA
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgagggaaattgttcacctgcaagctggtcagtgtgggaatcaaattggtgcaaagttt
tgggaggtgatcagtgatgaacacggaatcgacccgaccggcacctaccacggtgacagc
gacctgcagcttgagcggattaacgtgtattacaacgaagccactggtggaaagtatgtt
ccccgggctgtgctcgtggacttggagcctgggaccatggactctgtaagatctggtcct
tttggccaagtgttcagaccagacaacttcgtctttggtcagagtggggctggaaacaat
tgggccaaaggccattatactgaaggtgctgagctggtggactcggtgctggatgttgtg
cgtaaggaggccgagagctgtgactgcctacagggctttcagctcactcactccctgggc
gggggcaccggctcgggcatgggcacgctgctcatcagcaagatccgcgaggagtatccc
gaccgcatcatgaacacgttcagcgttgtgccgtctcctaaagtctctgacactgtggtg
gagccctacaacgccactctgtctgtgcaccaactggtagagaacactgatgagacatac
tgcattgacaatgaagcactttatgatatctgtttccgcaccttaaagctcacaactccc
acttatggtgacctgaaccatctcgtctccgccaccatgagtggtgtgaccacctgcctc
cgttttcctgggcagctcaacgctgacctgcgaaaactggctgtcaatatggtgcccttc
cctcgtctgcacttctttatgcctgggtttgccccactcaccagcagggggagccagcag
taccgtgcactcaccgtgcctgaattaacacagcagatgtttgatgccaagaatatgatg
gcggcatgtgacccgcgccatggccgctacctgactgtggctgccgtcttccggggccgc
atgtctatgaaagaggtggatgagcagatgctcaatgtgcagaacaaaaacagcagctat
tttgtagagtggatccccaacaatgtcaaaacagctgtatgtgacatcccaccaagaggg
cttaagatggctgccaccttcattggcaacagcacagccatccaggagctgttcaagcgc
atctctgagcagttcacagccatgttcaggagaaaggccttcctgcattggtacacagga
gaaggaatggatgagatggagttcactgaggcagagagcaacatgaatgaccttgtgtct
gagtaccagcagtaccaggatgccacagctgaagaggagggcgagttcgaggaagaggca
gaagaggagttggcataa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (9)   

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