KEGG   Pangasianodon hypophthalmus (striped catfish): 113531949
Entry
113531949         CDS       T05759                                 
Symbol
papola
Name
(RefSeq) poly(A) polymerase alpha isoform X1
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    113531949 (papola)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:phyp03019]
    113531949 (papola)
Enzymes [BR:phyp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     113531949 (papola)
Messenger RNA biogenesis [BR:phyp03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     113531949 (papola)
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central DUF6431
Other DBs
NCBI-GeneID: 113531949
NCBI-ProteinID: XP_026778744
Position
Unknown
AA seq 785 aa
MPFPITNQAQPAQDTPKHYGITSPISLAQPKESDLVQTQKLVEALKPFGVFEEELELQRR
ILVLGKLNTLVKEWIQDISRSKNIPPSLIENIGGKIFTFGSYRLGVHTKGADIDALCVAP
RHVDRSDFFTSFYEKLKEQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEN
LDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNIL
GFLGGVSWAMLVARTCQLYPNAVASTLVYKFFLVFSKWEWPNPVLLKQPVECNLNLPVWD
PRVTPSDRYHLMPIITPAYPQQNSTYNVSASTRNVMVEEFKQGLAIMDEILQNKADWSKL
FEAPNFFQKYKHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF
PGPKESNKTPEFSTMWVIGIEFRKMEGSELLNVDLTYDIQSFTDTVYRQAISSKMFESDM
KITAMHVKRKQLHQLLPDLVIPKRRKHSTEGLRTVNEGSVDLLLDSDNSMSMPSPTGTSS
AARTPFSASPHRSTGTTASSDSQGKTDTSGSTHPTAACLSEPKTSGRSSPPCAQRRPGSP
LHDENPKKLRLQEHSTVNEGSMDLSVDRDNSTSMPLPTGTSRTAFSASPHRSTGTTASSD
SQGKMDTSVDTHTAAACPSETETPSPSCAGKRPGSPLHDEQAKKLRLEEDSTSESVDQAA
EFSQASDFTALDREVKMETQAGESDAEGKIPPSRKMSSTDLSDVPHPPANPIQVVKNSIK
LRLSR
NT seq 2358 nt   +upstreamnt  +downstreamnt
atgccttttccaattacgaatcaggcgcaaccagcccaggacaccccaaagcattatggg
atcacgtcgcccatcagcctggctcagccgaaagagtcggacctggtgcagacgcagaaa
ctggtggaggcgctgaagcctttcggtgtgtttgaggaggagctggagctgcaacggaga
atcctggttttgggaaaacttaacacgcttgtcaaggagtggatccaggacatcagcagg
tccaagaatatacctccatcattgatagaaaatattggcggaaaaatatttacgttcggc
tcctataggttaggagtccacacaaaaggtgctgatatagacgccctctgtgtcgctcct
cgccatgtggataggtccgacttcttcacctctttttacgagaagttaaaagagcaagag
gaggtcaaagatttaagggctgtcgaagaggcgttcgtccctgtgattaaactgtgcttt
gatggcattgagattgatatcctgtttgctcggttagcgctgcagaccattccagagaac
ctggacctgcgtgacgatagtttactgaagaatctggatatccgctgtataaggagtctg
aacggttgcagggtgacggatgagattctccacctggtgccaaacattgagaatttcaga
ctcactcttagggccatcaaactgtgggctaaacgtcacaacatatattcgaacatcttg
ggtttcttgggcggtgtgtcatgggcgatgctggtggcgagaacatgtcagctctacccc
aacgctgtggcttcaaccctcgtgtataagttcttcctagtgttttctaaatgggagtgg
cctaatccagtccttttgaagcagccggtagagtgcaacctcaacctgccagtgtgggac
ccaagggtgacgccgagtgaccggtaccaccttatgcccatcatcacaccagcttatcct
cagcaaaactccacctacaacgtgtccgcgtccacccgcaacgtcatggtcgaagagttc
aaacagggtctggccattatggatgaaatattgcagaacaaagcagactggtccaaacta
tttgaagctccaaacttctttcagaaatacaagcattatattgtgttgctagcaagtgcg
cccactgagaagcagcacctcgagtgggtcggccttgttgagtccaagatccgaatcctg
gtgggaagcctggagaaaaatgagttcatcactctcgcacatgtgaatccacagtcgttc
ccaggacccaaggaaagcaataaaacgccagagtttagcacaatgtgggtcattggtatt
gagttcagaaaaatggaggggtctgaacttcttaatgtcgacttgacatacgacatccag
tcattcacagacacggtgtaccgtcaagccatcagcagcaagatgtttgagtctgacatg
aaaataacggcgatgcatgtgaagcggaagcagcttcaccagctcctgccggatcttgtt
atcccaaaaaggagaaagcattcgactgaaggcctgcgtaccgtgaatgagggcagtgtt
gacttgttgctggacagtgataacagcatgtccatgccctcacccaccggcacctccagt
gctgccaggacacccttctctgccagtcctcaccgctccacagggaccactgccagctca
gattctcaggggaagacagacacctcaggaagcacgcatcctactgcagcgtgtctatca
gagccgaagacctccggtaggagcagtcctccttgtgcacagaggagaccgggctcaccc
ctccatgatgagaaccccaagaagctcagattgcaggagcattcgactgtgaatgagggc
agcatggacctgtccgtggacagggataacagcacgtccatgcccttacccaccggcacc
tccaggaccgccttctctgccagtcctcaccgctccacagggaccactgccagctcagat
tctcaaggaaagatggacacgtcagtagacacgcatactgctgcagcgtgtccatcagag
acggaaacccccagtccttcttgtgcagggaagagaccgggctcaccgctccatgatgag
caagccaagaagctcagattagaggaggattctacctcagaatcggtggaccaggctgct
gaattttctcaggctagcgatttcactgctttagacagagaggtgaaaatggagacacag
gcaggggagtcggatgcagaagggaagataccaccatctcggaaaatgtccagtactgat
ctttctgatgttcctcatcctccggctaaccccatccaagtggtgaaaaactccataaag
ctcagactgagtaggtag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (10)   

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