KEGG   Scheffersomyces stipitis: PICST_85400
Entry
PICST_85400       CDS       T01023                                 
Symbol
PAP1
Name
(RefSeq) Poly(A) polymerase PAPalpha (Polynucleotide adenylyltransferase alpha)
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
pic  Scheffersomyces stipitis
Pathway
pic03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pic00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    PICST_85400 (PAP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pic03019]
    PICST_85400 (PAP1)
Enzymes [BR:pic01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     PICST_85400 (PAP1)
Messenger RNA biogenesis [BR:pic03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     PICST_85400 (PAP1)
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central Nrap_D2 Polbeta
Other DBs
NCBI-GeneID: 4840620
NCBI-ProteinID: XP_001386148
JGI: 85400
UniProt: A3LZ97
Position
7:<703131..704882
AA seq 556 aa
MSVRTYGVTDPISTANPTPKENSLNDALIGELRSRGSFESEQATKKRVEVLTQFQKMVQE
FVFTVSKKKNMSDGMAKDAGGKVFTFGSYRLGVYGPGSDLDTLVVVPQHVSREDFFTVFA
EIIRKRPELEEIVPVPDAFVPIIKIEYDGVPLDLIFACLNVPRIPLDMTLDDKNLLRNLD
ERDLRSLNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQKAVYGNVFGFPGGVAWAMLVA
RICQLYPNAVSAVIVEKFFNIYTKWNWPQPVLLKPIEDGPLQVRVWNPRLYANDRLHRMP
VITPAYPSMCATHNITSSTQKVILSELEKGAEVVRQINLGKKSWSDLFDRHDFFHHYKFY
LCVVAATVASDEEHLKWTGLIESKLRHLVLKLEVTEGVELAHPYVKDFSDSYVLGDANPS
DVIGAYGTLSGQPFLDTLAKSDDSNKGEKQIHLTKLFVGLNLQQLKSVDGVKKLNIQYPC
SEFYNICKGSGFYDEAINHINIKNVKLVDLPDDVYVEGEVRPTKNSKKRKKEVSLDKQKR
PKSTISTPPVSVNGSG
NT seq 1671 nt   +upstreamnt  +downstreamnt
atgagtgtcagaacgtatggtgtcactgatccgatatctacagccaaccccacgcccaag
gaaaacagtctcaatgatgcattgattggtgaactccgcagtcgtggatcatttgagagt
gagcaggcaacgaagaagagagtggaagtcctcactcaattccagaaaatggtacaagag
tttgtgttcaccgtttccaagaagaaaaatatgtccgatgggatggccaaggatgctgga
ggtaaagtgtttacttttgggtcttatagattgggtgtttacggcccaggctcggatctt
gataccttggttgtcgttccccagcatgtatcgagggaagactttttcactgtattcgcc
gaaattattcgtaaacgtccagaattagaagaaattgtacctgttccagacgcttttgtg
ccaattattaagattgagtacgatggcgtcccgcttgatttgatttttgcatgcttaaat
gttcctagaattcctcttgatatgactttggacgacaaaaatcttttgagaaatcttgac
gagagagatttgcggtccctcaacggaacaagagtcacggatgaaatattgcagttggta
ccaaaaccgacggtattcaagcatgctttgagatgcatcaagatgtgggctcaacagaaa
gctgtgtacgggaatgtattcgggtttccgggaggggtggcatgggcaatgttggttgct
cgtatatgtcaattatatcctaatgctgtaagtgctgtcattgttgagaaatttttcaat
atctatacaaaatggaattggccccagcctgtcctccttaagccaatcgaagacggacca
ttgcaagttcgtgtatggaacccaaggctttatgccaatgatcgtcttcaccgaatgcca
gttatcactccagcttatccttcgatgtgtgccactcataatattaccagctcgacacag
aaggtgattttgtcagagttagagaaaggtgcagaagttgtacgtcaaattaatttgggc
aaaaagtcctggtctgatctctttgatagacacgatttctttcatcattacaaattctat
ctatgtgtagttgcagcaacagtggcctcggacgaagaacatctaaagtggacgggtttg
attgagagtaagttaaggcatttggtcctcaaacttgaggtcacagaaggtgtagagttg
gcacatccatacgtaaaagacttttccgactcgtacgtacttggagatgcaaacccctct
gatgtcattggggcgtatggaaccttgtctggtcaaccatttttagatacacttgccaaa
agcgatgatagcaataaaggtgagaagcagatccacctcaccaaactctttgttggattg
aatcttcaacagcttaagtcggtggacggagtaaagaaattaaatatccaatatccatgt
tcagagttctacaatatttgcaagggatctggattttatgacgaagctataaaccatatc
aatattaagaatgtgaaacttgttgaccttcctgatgacgtttacgttgaaggggaagtg
agacctactaaaaacagcaaaaagaggaaaaaggaagttagccttgacaagcagaagcgc
ccaaaaagtacaatttcaactcccccagtatctgttaacgggtctggttga

  All links  
Gene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system