KEGG   Paenibacillus sp. JDR-2: Pjdr2_0883
Entry
Pjdr2_0883        CDS       T00977                                 
Name
(GenBank) RNA methyltransferase, TrmA family
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
pjd  Paenibacillus sp. JDR-2
Brite
KEGG Orthology (KO) [BR:pjd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pjd03009]
    Pjdr2_0883
Enzymes [BR:pjd01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     Pjdr2_0883
Ribosome biogenesis [BR:pjd03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Pjdr2_0883
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_31 TRAM Methyltransf_25 TRM5-TYW2_MTfase Methyltransf_15 MTS Cons_hypoth95 PrmA Methyltransf_11 PCMT Methyltransf_32 Methyltransf_12 N6_N4_Mtase
Other DBs
NCBI-ProteinID: ACS99562
Position
1041007..1042404
AA seq 465 aa
MDAPVQKNDEVVVDIIGLTHDGEGVGRADGYTLFIQGALPGERVRAKVMKVKKAYGYARL
QELLDASADRVVPVCGIYDKCGGCQLQHMDYAAQLNWKRQHVVDALERIGKLQIAGEGEE
ASGITVHPTVGMNDPWRYRNKAQVPVGASAGAGELIAGFYAKGSHRIIDTDQCHIQHDRN
DEVVRIVKAIGRELGVSAYDEESGKGLLRHVMTRTGFVSGEIMVVLVTNGRKLPQAELWV
ERIRAALPEVKSIVQNVNTRDTNVIFGDETKVLWGSEVIYDELDGIRFAISARSFYQVNP
SQTIELYRTAVDYAQLTGKESVIDAYCGIGTISLFLARKAGRVYGVEIVPEAIEDAKRNA
ELNGISNASFEAGPAEVVIPRWREEGIIPDVIVVDPPRKGCDPALLDTILKMQPERVVYV
SCNPSTLARDLRTLEDGGYKTVEVTPVDMFPWTSHVECVVWMVRK
NT seq 1398 nt   +upstreamnt  +downstreamnt
gtggatgcgccggtgcaaaaaaacgatgaggttgttgtcgacattatcggtctgacccat
gacggtgaaggggttggccgggcggacggctataccttgttcattcaaggggcgctgcca
ggcgagcgtgtacgggcgaaagtaatgaaggtaaaaaaagcgtacggctacgcgcgcctt
caagagctgctggatgcaagcgcggaccgcgtagttccggtatgcggcatttacgacaaa
tgcggcggctgccagctgcagcatatggactatgccgcgcagctgaactggaagcggcag
catgtcgtggatgcgctcgagcggatcgggaagctgcagattgctggcgaaggcgaggag
gcatccgggattaccgttcatccaacggtagggatgaacgatccgtggcgctaccgcaat
aaggcgcaggtgccggtcggggcttcagcgggtgccggcgagctgattgcaggcttttac
gccaagggcagccatcgcattatcgatacggatcaatgccatattcagcatgaccgcaac
gatgaggttgtccggattgtgaaggccatcggcagggagcttggcgtatcggcgtatgat
gaggagagcggcaaagggctgctccgccatgtaatgacgcggacaggctttgtgagcggc
gagattatggtcgtgctagtgaccaacggacgcaagcttccgcaagccgagttgtgggtg
gagcgaatccgcgcggcgttgccggaagtaaaaagcatcgtgcagaacgtaaatactcgc
gatacgaatgtcatctttggcgatgagacgaaggtgttatggggcagcgaggtgatctat
gacgagcttgacggtatccggttcgcgatctcggcgcgttcattctatcaggtgaacccg
tcgcagacgatagagctctaccggacagccgttgattatgcgcagcttacaggcaaggag
tccgttattgatgcctattgcggcatcgggacgatctctttgttccttgcacggaaggct
ggccgagtctacggcgtagagattgtgccggaggctatcgaggatgcgaagcgtaatgcg
gagctgaacggcatcagcaacgcctcgtttgaggcaggccctgcggaagttgtcatccct
cgctggcgcgaggaggggattatccccgacgtcattgtcgtggacccgccgcgcaagggc
tgcgacccggcgctgctggatacgatcctgaagatgcagccggagcgggtggtttacgtc
agctgtaatccttccacgctcgcgcgagatttgcgcacgctcgaagacggcggctataag
acggtagaggttacgccggtcgatatgttcccgtggacgagccacgtggagtgcgttgtg
tggatggttcgaaaataa

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