KEGG   Pseudoxanthomonas koreensis: ACEJ41_08200
Entry
ACEJ41_08200      CDS       T10879                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
pkq  Pseudoxanthomonas koreensis
Pathway
pkq03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pkq00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    ACEJ41_08200 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pkq03019]
    ACEJ41_08200 (rnc)
   03009 Ribosome biogenesis [BR:pkq03009]
    ACEJ41_08200 (rnc)
   03036 Chromosome and associated proteins [BR:pkq03036]
    ACEJ41_08200 (rnc)
Enzymes [BR:pkq01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     ACEJ41_08200 (rnc)
Messenger RNA biogenesis [BR:pkq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     ACEJ41_08200 (rnc)
Ribosome biogenesis [BR:pkq03009]
 Eukaryotic type
  90S particles
   RNase
    ACEJ41_08200 (rnc)
 Prokaryotic type
  rRNA processing factors
   ACEJ41_08200 (rnc)
Chromosome and associated proteins [BR:pkq03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     ACEJ41_08200 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase
Other DBs
NCBI-ProteinID: XGI13109
Position
complement(1789451..1790137)
AA seq 228 aa
MPTDRTIVRDRIGHCFADPSLLAQALTHRSAGAPHNERLEFLGDGVVNLIAAEALYARWP
KADEGVLTRARAELVREASLAAIARTLELGERLTLGPGELKTGGFRRDSILADALEAVVA
AIYLDAGYEACRGVVLPWFEQALAALPVGKPEKDAKTRVQEWLQARQRPLPSYELVSEGG
EEHAKLFLVRCTLSDPVLSAEGQGTSRRLAEQAAAAAVLALLAQSAQP
NT seq 687 nt   +upstreamnt  +downstreamnt
gtgccaactgaccgcaccatcgtccgcgaccggatcggccattgcttcgccgatccgtcg
ctgctggcgcaggcgctgacccaccgcagcgccggcgcgccgcacaacgaacgcctggag
ttccttggcgatggcgtggtcaacctgatcgccgccgaggcgctgtacgcgcgctggccc
aaggccgacgagggcgtgctcacccgtgcccgcgccgaactcgttcgcgaggcttcgctg
gcggccatcgcccgtaccctggaactgggcgagcgcctgaccctgggcccgggtgagttg
aagaccggcggtttccgccgcgactccatcctggccgatgcactggaggcggtggtggcg
gcgatctacctggacgccggctacgaggcctgccgcggcgtggtgctgccgtggttcgag
caggccctggccgcgctgcccgtcggcaagccggagaaggacgccaagacccgcgtgcag
gagtggctgcaggcgcggcagcggcccttgccgagctacgagctggtctccgaagggggc
gaggaacacgccaagctcttcctggtccggtgtaccctgagcgaccccgtgctcagcgcc
gaagggcagggtacctcgcgacggctcgccgaacaggccgccgccgccgcggtgctcgcg
ctcctggcgcaaagcgcacagccatga

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