KEGG   Pseudomonas koreensis: AYO71_19825
Entry
AYO71_19825       CDS       T04647                                 
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
pkr  Pseudomonas koreensis
Pathway
pkr03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pkr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    AYO71_19825
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pkr03400]
    AYO71_19825
Enzymes [BR:pkr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     AYO71_19825
DNA repair and recombination proteins [BR:pkr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     AYO71_19825
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-ProteinID: AMT89679
Position
4468906..4469718
AA seq 270 aa
MKIVSFNINGLRARPHQLAALIEKHQPDVIGLQETKVHDDQFPLEDIRALGYHVHFHGQK
GHYGVALLSRNEPIAIHKGFATDEEDAQRRFIWGTFADANGVPVTIMNGYFPQGESRDHP
TKFPAKERFYSDLQALLESQFHNEQPLVVMGDVNISPEDCDIGIGPDNMKRWLKTGKCSF
LPEEREWMARLKNWGLTDSYRHLNPDVSDMFSWFDYRSRGFEDEPKRGLRIDVILASHGL
LPRVKDAGVDYELRGMEKPSDHAPIWLELA
NT seq 813 nt   +upstreamnt  +downstreamnt
atgaagattgtttccttcaacatcaacggactgcgtgcccgtccgcatcagctggcagcg
ctgatcgaaaaacatcagcccgacgtgatcggcctgcaggaaaccaaggtccacgacgac
cagttccccctcgaagacatccgcgccctcggctaccacgtgcacttccatggccagaaa
ggtcattacggggtcgccctgctctcgcgcaacgaaccgatcgccatccataaaggcttc
gccaccgatgaagaagacgcgcagcggcgctttatctggggcacttttgccgatgccaac
ggcgtgccggtgacgatcatgaacggctatttcccacaaggtgaaagccgcgaccaccca
accaaattccctgccaaggagcgtttctacagcgacctgcaagcgctgctggaaagccag
ttccacaatgaacagccactggtggtgatgggcgatgtgaacatttccccggaagactgc
gacatcggcatcggcccggacaacatgaagcgctggctgaaaaccggcaaatgcagcttc
ctgccggaagaacgcgagtggatggcgcgcctgaaaaactggggcctgaccgacagctac
cgtcacctcaatcccgacgtgagcgacatgttcagctggttcgactaccgcagccgtggc
tttgaagatgagcccaaacgcggcctgcgcatcgatgtaattctggcttcccatggcctg
ctgccacgggtcaaggatgccggcgtggactacgaactgcgcggcatggaaaagccatcg
gaccatgcgccgatctggcttgagctggcctga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (3)   

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