KEGG   Pichia kudriavzevii: C5L36_0B11230
Entry
C5L36_0B11230     CDS       T06133                                 
Name
(RefSeq) uncharacterized protein
  KO
K03141  transcription initiation factor TFIIH subunit 1
Organism
pkz  Pichia kudriavzevii
Pathway
pkz03022  Basal transcription factors
pkz03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pkz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    C5L36_0B11230
  09124 Replication and repair
   03420 Nucleotide excision repair
    C5L36_0B11230
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pkz03021]
    C5L36_0B11230
   03400 DNA repair and recombination proteins [BR:pkz03400]
    C5L36_0B11230
Transcription machinery [BR:pkz03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     C5L36_0B11230
DNA repair and recombination proteins [BR:pkz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     C5L36_0B11230
SSDB
Motif
Pfam: BSD PH_TFIIH FAM199X CHASE7
Other DBs
NCBI-GeneID: 40383653
NCBI-ProteinID: XP_029321365
UniProt: A0A2U9R452
Position
2:complement(2390878..2392917)
AA seq 679 aa
MARIQGFANHKKRGGMLTITEDTFPPMMIWRCADPSAPTNLVELELNTVSHLKATPATSD
KLMLKIGLENGKELLFGFNSRKVMDDVKVSIQQIIARKKTSIEMEKTKESSMEDSNNDIS
GTASIASDGTGASSAGKLISGGTKTAKDFSEAGAEATNAKFMEDMLDTKELLKNLKLQQK
FLRENLKVMKTFKEAVINEGMEAEDFWKSRIHLLRAYAIQNNQKKGPYNVLSTIKPVASS
DNEVNVNVTREKINEIFKQYPIVRKAFDDNVPRMSEGEFWSRFFSSKLFRKLRGEKVNLY
DRGDVTLDKYLYFDPDYDGEEEIEEVETVEALLADDKADISKKRKEGAEKIIKRKKVKFF
NENTGPIPKVLDIEGNREDDPQLRGNKPDITMKDDQDPQLVGILRTMNRLSRRLIADIEG
QKSELKEQEFSKELELIDLDEAKHNEYNELKYTQTSNVASNIVPKHLIEKVIHQSNLNPE
SCEYDDIMIELKNTFQTEFDLTTVYRNMKKEGKRQNDAYKDINNLVKQNAKLSQQSWNIN
LKELLGLPSSSASTNATNNTLSRDTSDYDLGVNISLDTAKIESVKLTHTAAMEFLKLFWT
QFNKTAESTPATDPNFKSDLIKLRKYYFSIRRCLERVDSQINNSEDEKEKEIKKQLLAPL
IQSLKSALNRYEVSIVKPK
NT seq 2040 nt   +upstreamnt  +downstreamnt
atggcacgtatacaggggtttgcaaatcataaaaaaagaggtggaatgctgacaataaca
gaagatacattcccaccaatgatgatctggagatgcgcagatccgtcagcacctactaat
ttagtggaattagagttaaataccgttagtcatttgaaggcgacgcctgctacatcagat
aagctcatgttgaagattgggttggagaatggcaaagaattactatttggattcaacagt
aggaaggttatggatgatgttaaagtttccattcaacagataattgcgagaaagaaaaca
tctatcgaaatggaaaagacaaaggaaagttcaatggaagactctaataatgatatatca
ggtacagcaagtatagcaagtgatggtacgggtgcatcttctgctggaaagttgatcagc
ggtggtactaagactgctaaagatttcagtgaagctggtgccgaggcaacaaatgctaaa
tttatggaagacatgcttgacaccaaagaactgctaaagaacctcaagctacaacagaag
tttttaagggaaaacctgaaagttatgaaaactttcaaagaggctgtgataaatgaaggt
atggaagcagaagatttttggaaaagtagaatacatcttttgcgagcgtatgccattcaa
aataatcaaaagaaagggccatataacgttttaagtactatcaaaccagttgcttcatct
gacaacgaagtcaacgttaatgttaccagagaaaaaatcaatgaaattttcaagcaatac
cctattgttcgaaaagcatttgatgataatgttccaagaatgtctgaaggtgaattttgg
tcaaggttttttagtagtaagttattcagaaaactaagaggtgaaaaagttaatttatat
gatcgaggtgatgtgacattggataagtatttgtattttgatccagattatgacggtgaa
gaagaaatcgaagaggttgaaactgtggaagcattattagctgatgataaggcagatata
tcgaagaagcgtaaagagggcgctgaaaagatcatcaaaagaaagaaagtcaaatttttc
aatgaaaacacagggcctatcccgaaggtactagatatcgaaggtaatagagaagatgat
ccacagttaaggggtaacaagcctgatataacaatgaaagatgatcaagatccgcaacta
gttggtattttgagaaccatgaaccgattaagtaggaggttaattgcggatattgagggg
cagaaaagtgaattgaaggagcaagagttctctaaggagttagaactaatcgatcttgac
gaagccaaacacaacgagtataacgagcttaaatatacacagacttctaatgttgcttct
aatattgttcctaaacacttgattgaaaaggtaatacaccaatctaatctaaatcctgag
tcatgtgagtacgatgatattatgatagaattgaaaaatacttttcaaacggaatttgat
ttgactactgtctacagaaacatgaaaaaggaaggtaagaggcaaaatgacgcgtataaa
gatatcaataatcttgttaaacagaacgccaaattgtcacagcaatcgtggaatatcaat
ttaaaagaattattaggtttaccctcctcatctgcttcgacaaatgcaacaaacaatacg
ctcagtagagatacttctgattatgatcttggagttaatataagcttagacacagctaaa
attgaaagtgtaaaattgacacacactgctgccatggagtttttgaaactattttggact
cagtttaacaaaaccgcagaatctaccccagctacagatcctaacttcaagtctgatttg
atcaagctacgtaagtactacttctctatacgaagatgtctagaaagggttgattcgcaa
atcaataactctgaagacgaaaaggaaaaggagattaaaaaacaactattagcacctcta
attcaaagtcttaaatctgcattaaacagatatgaagtttcgattgtcaagccaaaatag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (9)   

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