KEGG   Poecilia latipinna (sailfin molly): 106948556
Entry
106948556         CDS       T08005                                 
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta
  KO
K05089  platelet-derived growth factor receptor beta [EC:2.7.10.1]
Organism
plai  Poecilia latipinna (sailfin molly)
Pathway
plai04010  MAPK signaling pathway
plai04020  Calcium signaling pathway
plai04510  Focal adhesion
plai04518  Integrin signaling
plai04519  Cadherin signaling
plai04540  Gap junction
plai04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:plai00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    106948556 (pdgfrb)
   04020 Calcium signaling pathway
    106948556 (pdgfrb)
  09133 Signaling molecules and interaction
   04518 Integrin signaling
    106948556 (pdgfrb)
   04519 Cadherin signaling
    106948556 (pdgfrb)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    106948556 (pdgfrb)
   04540 Gap junction
    106948556 (pdgfrb)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    106948556 (pdgfrb)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:plai01001]
    106948556 (pdgfrb)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:plai04090]
    106948556 (pdgfrb)
Enzymes [BR:plai01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.10  Protein-tyrosine kinases
    2.7.10.1  receptor protein-tyrosine kinase
     106948556 (pdgfrb)
Protein kinases [BR:plai01001]
 Receptor tyrosine kinases (RTK)
  PDGFR family [OT]
   106948556 (pdgfrb)
CD molecules [BR:plai04090]
 Proteins
  106948556 (pdgfrb)
SSDB
Motif
Pfam: PK_Tyr_Ser-Thr Pkinase Ig_PDGFR_d4 Ig_3 I-set ig Ig_2 VEGFR1-3_N_Ig-like V-set Ig_VEGFR-1-like_5th VEGFR-1-like_Ig-like ABC1
Other DBs
NCBI-GeneID: 106948556
NCBI-ProteinID: XP_014889793
Position
Unknown
AA seq 1040 aa
MTASIRATTGSLNLLHFLLGVFLSRPEGGVALELLPSSTEVLLQSQSNFSVVCSGWSEVK
WHLPQDADGGPEVLVQVDGSSRILQLLGATWRSSGRYTCEEPSADQSRAVDVFVPGQGPE
QWFVPQSSSQVYKHSEEGTIPCVVSDPKLNVSLFERPGRTAVGGVRYVPALGFTGHLNDA
GHVCVATDGDQEKESQVFYVFTVLEPKQMEMELSVSSEVLKQGEVLTMNCSVRDVDMAFF
TWTFPRRQEVEPLTDILSNEIRSFINISKATESDSGVYVCKAQDSQFRWTVRKNITITVL
DKGYVYLWPSGETNISSVVHHTVELKVVGDALPTPTFTWSRLNQTIAMETSSINTTHLTS
SRYVSTLTLHQVQLDQAGTYTATASNEDSREEVMFYLQVTAPPRILSLSEVDKKDILCVS
EGVPTPSVTWYTCPRSIRCSNLSDGWRSQLGALEQDVTTVIEGDGALVKSVLTLKTLDSV
SAVRCEATNAAGERARDLRVLRTSLLSQVVVLVAVLVLVIIGVIFFIILIALWRNKPHYE
THWKLMESGGSDGQPCSYVDPEDLPYSSAWEIPRDQVALGQVLGSGPFGRVVEATVSGLT
GSDTPTKAAVKIMKSKRDAAQSLMSELKVLGYLGPHLNVVNLLGACTSPGPVYLITEFCR
LGNLLNCLQRNKDTFGQVDMPSRSNSDGGYMDMNQDGRGRYVPLKELRDTEQGTGHAPTD
HQKAPSLLLSDSPVLTMEDLFSFSFQIAQAMDFLSSRKCVHRDLAARNVLVCEGKLLKIC
DFGLARDLQKDEDYIIRRNSFLPLRWMSPESIFQNIYGSESDVWSYGVLLWEIFSLGCTP
YPDLLTTRQFSSALKRGHRMDRPEHATSDMYAVMKQCWDEDPLSRPSFSSLVVAVGNMLP
ADYRQRYAQLTEDFLRGEGPAVLQSRRSLSRTTETETETDVQEDRNPSHCTAHFQEAELS
IHFTGSPSSDVKERLLEAEPEDSGPSHNTYIMPVVTMETSSSTALDAVSPLLSDPAAILE
SQEVTSPPEAPAEVEEESCL
NT seq 3123 nt   +upstreamnt  +downstreamnt
atgacggcatccatcagagccacaacaggaagtctgaacctcctgcacttcctgctgggt
gtgttcctgagccgtccagaaggtggcgtggccctggagctgctaccttcctccacagaa
gttctccttcaatcacagtccaacttctccgtggtgtgttcagggtggagtgaggtgaag
tggcacttgcctcaggacgctgacggaggtccagaggttctggtacaggtcgacggctcc
agccgcatcctgcagctccttggcgccacctggaggagctccggcaggtacacctgtgag
gagccgtccgccgatcagagccgcgcagtggacgtctttgtacctggacaaggtccagag
cagtggttcgtcccacagagttcctcccaggtgtacaagcactcagaggaaggtaccatt
ccctgcgtggtgtccgacccaaagctcaacgtctctctgttcgaacgacccggcagaact
gcagtgggcggggtcagatacgtgccggctctgggctttacgggacacctcaatgatgca
ggacatgtctgtgtggcgacagacggagaccaggagaaggagtcccaggtcttctatgtc
ttcaccgtcctcgaaccgaagcagatggagatggagctgtcagtgtccagcgaggtcctg
aagcagggggaggtcctgaccatgaactgctccgtcagagacgtggacatggcctttttc
acatggaccttcccccgcagacaggaagtagaacctctgacagacatcctgtccaatgaa
attcgctcgttcattaacatctccaaggcaacagagtcagattcaggtgtttatgtgtgc
aaagctcaggactcgcagtttagatggaccgtgaggaaaaacatcacaataactgttctg
gacaaaggctacgtctacctgtggccctcaggtgagaccaacatctcgtctgtcgtccac
cacaccgtggagctgaaggtagtgggtgacgccctccccacccccaccttcacctggtcc
aggctaaaccagactatcgccatggaaaccagctccatcaacaccactcacctgaccagc
agcaggtatgtgagcaccctgacgctccatcaggtgcagttggaccaggcaggaacttat
actgcaactgcatccaatgaggacagcagagaggaggtcatgttctacctacaggtcaca
gctcctccaaggattttgtctctgtcagaagttgataagaaagacatcctgtgtgtcagt
gagggagtcccaactccttctgttacctggtacacctgtccacgttcgatcaggtgcagt
aatctgagtgacggttggaggagccagttaggggccttggaacaggacgtcaccacagtg
atagaaggagacggagccctggtaaaaagtgtgttgactctgaaaactctggactctgtg
tcggctgttcgctgcgaagctacgaacgcagcaggagaacgagcgcgagacctgcgagtt
cttcgcacctcccttctgtcccaggtggttgtcttggtggcggttctggttctggtcatc
ataggcgtgatcttcttcatcatcctcattgctctctggagaaacaagcctcactatgaa
acacactggaagctgatggagtctggaggttctgacggacagccatgttcctacgtggac
cctgaagacctgccctacagctccgcctgggagatccccagagaccaggtggcacttggt
caggtcctgggttctggtccatttggacgggttgtagaggcaacagtttctggtctgact
ggctctgacacgccaacaaaagctgcagtgaagatcatgaagtccaagagggatgcggcc
cagtctctgatgtccgagttaaaggttctgggttacctgggtcctcatctgaacgtcgtc
aacctgctgggagcctgcaccagcccaggtccagtttacctgatcactgagttctgtcgt
cttggtaacctgctgaactgcctgcagaggaacaaagacacatttggacaggtggacatg
cccagcaggagtaacagcgacggcggctacatggacatgaaccaagacgggcggggacgt
tatgtccctctgaaggagctgagagacactgaacaggggacaggccacgcccccacagac
caccagaaggcgccatcgctcctccttagcgactctcccgtcctcaccatggaagacctg
ttcagtttctccttccagatcgctcaggccatggatttcctgtcctccaggaagtgtgtc
cacagagacctggcagccaggaacgtcctggtctgtgaggggaagctgctgaagatctgt
gattttggtttggccagagaccttcagaaggacgaagattacatcatcaggagaaacagc
ttcctgccgctgaggtggatgtctccagagagcatcttccagaacatctacggctctgag
agcgatgtgtggtcctacggagtcctgctgtgggagatcttctctctgggctgtaccccg
tatcctgacctccttacaacccgacagtttagttctgctctgaagagaggacacagaatg
gaccgaccagaacacgctacatctgacatgtatgctgtgatgaagcagtgctgggatgaa
gatcctctctccagaccatctttctcatcattggttgttgccgtgggcaacatgttgcca
gctgactaccgacagcggtacgcccagctgactgaagacttcctgagaggagagggcccg
gccgtcctccagtccagacgcagcctgtcccggacgaccgagacggagacagagacggac
gtccaggaggacagaaacccctcccactgcaccgcacacttccaggaagctgaactcagc
attcatttcacaggaagtccttcctctgacgtgaaggagcgcctgctggaggcggaacca
gaggactcaggcccctcccataatacttacatcatgcctgttgtcaccatggaaaccagc
agcagcactgcgctggacgcagtcagccctctgctgtcagacccggctgccatcttggag
tcacaggaagtgacatcgccaccagaagctcctgctgaggtagaggaggagagctgcctg
tga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (16)   

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