KEGG   Platalea leucorodia (Eurasian spoonbill): 309596017
Entry
309596017         CDS       T12103                                 
Symbol
PDGFRB
Name
(RefSeq) platelet-derived growth factor receptor beta
  KO
K05089  platelet-derived growth factor receptor beta [EC:2.7.10.1]
Organism
plec  Platalea leucorodia (Eurasian spoonbill)
Pathway
plec04010  MAPK signaling pathway
plec04020  Calcium signaling pathway
plec04510  Focal adhesion
plec04518  Integrin signaling
plec04519  Cadherin signaling
plec04540  Gap junction
plec04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:plec00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    309596017 (PDGFRB)
   04020 Calcium signaling pathway
    309596017 (PDGFRB)
  09133 Signaling molecules and interaction
   04518 Integrin signaling
    309596017 (PDGFRB)
   04519 Cadherin signaling
    309596017 (PDGFRB)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    309596017 (PDGFRB)
   04540 Gap junction
    309596017 (PDGFRB)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    309596017 (PDGFRB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:plec01001]
    309596017 (PDGFRB)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:plec04090]
    309596017 (PDGFRB)
Enzymes [BR:plec01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.10  Protein-tyrosine kinases
    2.7.10.1  receptor protein-tyrosine kinase
     309596017 (PDGFRB)
Protein kinases [BR:plec01001]
 Receptor tyrosine kinases (RTK)
  PDGFR family [OT]
   309596017 (PDGFRB)
CD molecules [BR:plec04090]
 Proteins
  309596017 (PDGFRB)
SSDB
Motif
Pfam: PK_Tyr_Ser-Thr Ig_PDGFR_d4 Pkinase Ig_3 I-set ig VEGFR1-3_N_Ig-like Ig_2 Ig_VEGFR-1-like_5th V-set VEGFR-1-like_Ig-like C2-set_2 DUF3944
Other DBs
NCBI-GeneID: 309596017
NCBI-ProteinID: XP_082179844
Position
11:complement(18312821..18346562)
AA seq 1093 aa
MLRPSLKTSLWLLILTGLLEVTSGGSGLHVEPGDAELVLGLHSTFSLLCYGDGTLVWERE
GQPLAASLEHRDGIFISNLTLSNVTGRHTGEYACSYSPDQAPEPVERKALYIYVPDPSLV
FLPTITSEELFIFITGYTEAVIPCRVTNPQMQVTLYEKKVENPIPAAYDPQQGFKGFFED
KTYFCRTIVDDQEVDSDTFYVYRIQVSSVNVSISAVQTIVRQGENVTLMCTVSGNELVNF
NWDYPRKQAGKAVEPVTDFLPGSTHEIRSILIIQNAELEDSGTYVCNVSEGYHEKTDRKD
ITVHVIERGFVRFHTHLPSTVYAEVHKSRTIQVELEAYPQPNIMWLKNNKTLTMESSSEF
TITSRNLSETRYQTALVLVRVKQEEGGFYTIRAFNEDDEQELSFHLQINVPAKVVDLKEN
SSASSGEQTVTCSAEGMPQPEISWSTCSDIKWCSTKGQPTRLLGNESAEIGLQTNATYHA
ELQVYRVNSTLQLHRVDEPLLLRCTVQNFLGTNSQDITLVPHTLPFKVVIISVILALLVL
TVISLIILIVLWQKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDSTWEVPRDKLVLGR
TLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNI
VNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQSYGEKARREAEVYGNTVKEDHV
QSHLSLSVESDGGYMDMSKDDSLDYVPMSDMKGEVKYADIESSNYGTPYELDSYSPSAPE
RTDRVTLINESPLLSYMDLVGFSFQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICD
FGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPY
PELPMNEQFYNAIKRGYRMSKPTHASDEIYDIMQKCWEEKFEIRPSFSQLVVLMGNLLVD
CYRKRYQQVDEEFMKSDHPAVVRTRPTIPGLNNTRLTPSSPTSSILYTAVHQNGGENDYI
IPLPDPKPEAICDLPQEASISRASSTLNEANTSSTISCDSPLGLRQEEEQESDPQPGCQE
PTTGHQEVEESFL
NT seq 3282 nt   +upstreamnt  +downstreamnt
atgctgcgcccctctctgaagacatctctctggctcctcatcctcactggtctgctggag
gtaacgtccgggggcagcgggctgcacgtcgaacccggagatgctgagcttgtccttggc
ctccacagcaccttctccctcttgtgctatggggatggcacgctggtctgggaacgggag
ggtcagccccttgccgcctcactggagcacagggatggtatcttcatcagcaatctcacc
ctcagcaacgtcacgggccgtcacaccggggagtacgcgtgcagctacagccctgaccag
gctccagagccagtggagaggaaagccctgtacatctatgttccagatccctccctagtc
ttcctccccaccatcacctccgaagagctcttcatcttcatcacgggctacacagaggct
gtcatcccatgccgcgtgaccaacccgcagatgcaggtgaccctctatgagaaaaaggtg
gagaaccccatcccagctgcttatgatccacaacagggattcaaaggcttctttgaggat
aagacctatttctgccggacaatcgtggatgaccaggaggtggattcagacactttctac
gtctacaggatccaggtctcatctgtgaacgtctccatcagcgcagtgcagaccatagtg
cgtcagggagaaaacgtcaccctgatgtgcactgtgagcggcaacgagctagtcaacttc
aactgggattatccccgcaagcaggcagggaaggctgtggagccggtgaccgacttcctg
cctggatccacccatgagatccgctccatcctcatcatccagaatgcagagctggaggac
agcgggacctacgtctgcaacgtctctgagggctaccatgagaaaacagaccggaaagat
atcacggtccatgtgatcgagcgtggcttcgtgcgctttcacacccacctgcccagcacg
gtgtacgctgaggtccacaagagccgcaccatccaggtggagctggaggcctacccacaa
cccaacatcatgtggctgaagaacaacaagacgttgaccatggagagcagcagtgagttc
accatcaccagcaggaacctgtcagaaaccaggtaccagacggctctggtgctggtgcgg
gtgaagcaggaggaaggaggattttacaccatccgggctttcaatgaggacgatgagcag
gagctgtccttccatctgcagataaatgtgccagccaaagtggtggatctcaaggagaac
agcagtgccagcagtggggagcagaccgtaacgtgctctgctgaaggcatgccccagcca
gagatcagttggtctacttgcagcgacatcaaatggtgcagcaccaagggacagcccacc
cggctgctggggaatgagtccgcagagattggtctgcagaccaatgccacataccacgca
gagctgcaggtgtaccgcgtgaacagcaccctgcagctgcacagggtggatgagcccctg
ctcctgagatgcaccgtgcaaaacttcctgggcacaaactcccaggacatcactctggtc
ccacacaccttgccgttcaaagtggtcatcatctctgtcatcctggccttgctggtcctc
accgtcatctccctgatcatcctgattgtcctgtggcagaagaaacctcgttatgaaatc
cgctggaaggtgatcgagtcagtcagctccgatgggcatgagtatatctacgtggatcct
atgcagctcccttacgactccacctgggaggtgcccagggacaagctggtgttaggacgt
actctcggctctggtgcctttggacgcgtggtggaggcaacagcccacggcctgagccat
tcgcagtccaccatgaaagtggcggtcaaaatgctcaagtccactgcccggagcagcgag
aagcaagccctcatgtccgagctgaagatcatgagccacttgggacctcacctcaacatc
gtcaacttgctgggggcctgcaccaaaggagggcccatctatatcatcactgagtactgc
cgctatggggacctggtggactacctgcaccgcaacaagcacaccttcctgcagtcctac
ggagagaaagcacggcgagaggcagaggtgtacgggaacaccgtcaaggaggaccacgtg
cagagtcacctctccttgtctgtggagagcgacgggggctacatggacatgagcaaggac
gactccctggattatgtgcccatgtccgacatgaagggtgaagtcaagtatgctgacatc
gagtcatctaactacggcaccccgtacgagctggacagctattccccgtcagctcctgaa
agaacagaccgggtgacgctgataaacgagtctccgctcctcagctacatggacttagtg
ggcttcagtttccaggtggccaatggaatggagttcctggcttccaaaaactgtgtgcat
cgtgacctggctgccaggaacgtcctcatctgcgaggggaagctggtgaagatctgtgac
tttggcctggcaagagacatcatgcgggattccaactatatctccaaaggcagcaccttc
ttgccccttaagtggatggctccagagagcatcttcaacaacctctacaccaccctgagc
gatgtgtggtccttcgggattctcctctgggagatattcactctaggggggactccatac
cctgaactgcctatgaacgaacagttctacaatgccatcaaacgtggctatcggatgtcc
aaacccacccacgcctctgatgaaatctatgatatcatgcagaagtgctgggaggagaag
tttgagatcagaccatccttctcacagctggtggtgcttatgggaaacctcttggtggat
tgctacagaaagaggtaccagcaggtggatgaagagttcatgaagagtgaccaccctgct
gttgtccgcacaagacccacaatccctgggctgaacaacaccaggctcactcccagctcc
cccaccagcagcatcctctacacagccgtgcaccagaacgggggcgagaatgactatatc
atccctcttcctgatcccaaacccgaggcgatctgtgatctgcctcaggaggcctccatc
agccgggccagctctacgctgaacgaggccaacacatcatctacaatatcctgtgacagc
cctctgggcctccggcaggaggaggagcaggaatctgacccacagccaggctgccaggag
ccgaccacagggcaccaagaggtggaggagagtttcctgtag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (17)   

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