KEGG   Peromyscus leucopus (white-footed mouse): 114703261
Entry
114703261         CDS       T07241                                 
Symbol
Aptx
Name
(RefSeq) aprataxin isoform X1
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
pleu  Peromyscus leucopus (white-footed mouse)
Pathway
pleu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pleu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    114703261 (Aptx)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pleu03400]
    114703261 (Aptx)
Enzymes [BR:pleu01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     114703261 (Aptx)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     114703261 (Aptx)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     114703261 (Aptx)
DNA repair and recombination proteins [BR:pleu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     114703261 (Aptx)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     114703261 (Aptx)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT FHA Glycoamylase FtsK_SpoIIIE_N zf-C2H2_4
Other DBs
NCBI-GeneID: 114703261
NCBI-ProteinID: XP_028739891
Position
2:complement(52343943..52376064)
AA seq 368 aa
MTSSSSPGSGGAQWRRERVCECLQSRAMMRVCWLVRQDSGHQRIRLPHLEAVVIGRSPET
KITDKKCSRQQVQLKAECNKGYVKVKQVGVNPTSIDSVIIGKDQEMKLQPGQVLHMVNEL
YPYIVEFEEVAQSPDLETQRKRKRSDCDGEEMDAAQEAESGTGLAPGSSPSQCSVPSKKG
KDGVTKEESLGHWSQGLKVSMKDPKMQVYKDELVVVIKDKYPKARHHWLVLPWASISSLK
VVTSEHLDLLKHMHTVGEKVISDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLK
NKKHWNSFNTEYFLDSQAVIQMVEEAGRVTVQDGTSELLKLPLRCHECQQLLPSIPQLKE
HLRKHWGG
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgacgtcatcttccagccccggaagtggcggggcgcagtggcgccgcgagcgggtttgt
gagtgtctgcagtcgagagcgatgatgcgggtgtgctggttggtgagacaggacagcggg
caccagcgaatcagacttccccatttggaagcagttgtgattggtcgaagcccagagacc
aagatcacagataagaaatgttctcgccagcaagtacagttgaaagcagagtgtaacaag
ggctatgtcaaagtaaagcaggtgggggtcaatcccaccagcattgactccgtcatcatc
gggaaggaccaagagatgaagctgcagcctggccaggttctccacatggtgaatgaactt
tatccatatattgtagagtttgaggaagtagcacagagtcctgacctagaaacacaaagg
aagagaaagaggtcagactgtgatggtgaggagatggatgctgctcaggaagcggagtct
gggacagggctagcacctgggagcagccccagccagtgctctgtgccttctaagaagggc
aaggatggagtcaccaaagaggagtcactgggccactggagtcaaggcttgaaagtttct
atgaaagaccccaaaatgcaggtttacaaagatgagctggtggtggtgattaaggataaa
tatcccaaggcccgtcaccattggctggtcttaccctgggcctccatttccagtctgaag
gttgtgaccagtgaacatcttgaccttctcaaacatatgcacactgtaggggaaaaggtg
atttcggattttgctggatccagcaaactgagattccggttgggttaccatgctattccc
agtatgagccatgtacaccttcatgtgatcagccaggattttgattctccttgccttaaa
aacaaaaaacattggaattctttcaatacagaatactttctggactcacaagctgtgatc
cagatggtcgaagaggctggcagagtgactgttcaagatgggacttctgaactcctgaag
ctgcctcttcgttgccacgagtgtcagcagctgctgccctccatcccgcagctgaaggag
cacctcaggaagcactggggcgggtga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (8)   
   Pfam (8)   
All databases (21)   

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