KEGG   Peromyscus leucopus (white-footed mouse): 114705497
Entry
114705497         CDS       T07241                                 
Symbol
Papolb
Name
(RefSeq) LOW QUALITY PROTEIN: poly(A) polymerase beta
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
pleu  Peromyscus leucopus (white-footed mouse)
Pathway
pleu03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pleu00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    114705497 (Papolb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pleu03019]
    114705497 (Papolb)
Enzymes [BR:pleu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     114705497 (Papolb)
Messenger RNA biogenesis [BR:pleu03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     114705497 (Papolb)
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central Polbeta
Other DBs
NCBI-GeneID: 114705497
NCBI-ProteinID: XP_028743213
Position
23:38022374..38024646
AA seq 639 aa
MMPFAVTTQGAQQPAPAPKQYGISSPISLAAPKDTDRELTQKLIETLQPFGVFEEEEELQ
RRILILQKLNNLVKEWIREISESRNLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCV
APRHVDRNDFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIP
EDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSN
ILGFLGGVSWAMLVARTCQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPV
WDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWS
KLFEAPSFFQKYKHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQ
SFPAPKENVDKEEFRTMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAINSKMFEM
DMKIAAMHLRRKELHQLLPNHVLQKKETHLTEGVRLTAVNDSSLLLSVDSKNRISAPSPT
GTMKTGPLTVNPQGRNSPVLTVMTASVTNIQFPEVSLQHVSPIESSGIALSESIPQIPSQ
PTISPPPKPTMTRVVSSTHLVSHPLDLQEIQQRTYPILY
NT seq 1920 nt   +upstreamnt  +downstreamnt
atgatgccatttgcggtgaccacccaaggagcacaacagccggctcccgccccgaagcag
tacggcatatcgtcccccatcagcctggccgcccccaaggacacagaccgcgaactcacc
cagaagctgattgagaccctccagcccttcggggtgtttgaagaggaagaggaactgcag
cgcaggattttaattttgcagaaattaaataatctggtgaaggaatggatccgagaaatc
agtgaaagcaggaatcttccacaagctgtaattgagaatgttggggggaaaatttttacg
tttggctcttatcgactaggagtacacacgaaaggtgccgatatcgatgcgttgtgtgtt
gcaccaagacacgtggatcgaaatgactttttcacctccttttatgacaaactgaaacta
caggaggaagtaaaagatttgagagctgttgaagaggcctttgtgccggttatcaaactg
tgttttgatgggatagagattgatattttgttcgcaagattagcattgcagactattccg
gaagatttggacctacgagatgatagtctgcttaaaaatttagatattaggtgtataaga
agccttaatggttgccgagtaactgatgaaattttacatctggtaccaaacattgacagc
ttcaggttaacactgagagccatcaaattatgggccaaatgccacaatatctattccaat
atattgggtttccttggaggtgtttcctgggctatgctagtagcaagaacttgccagctt
tatccaaatgcaatagcatccactctagtacgtaaatttttcttggtattttctgagtgg
gaatggccaaatccagtgttgttaaaagaaccagaagaacgaaatcttaacttgcccgtg
tgggacccaagagtgaatcccagtgacaggtaccatcttatgcctataattacaccggca
tacccacagcagaactccacatacaatgtgtctgtttccactaggatggtcatgattgaa
gagtttaagcaagggcttgctatcacacatgaaattttgctgaataaggcagaatggtcc
aaactttttgaagcgccaagcttttttcaaaaatacaagcattatattgtacttctggca
agtgcaccaacagagaaacaacatttagagtgggtgggcttggtggaatcaaagatccga
atcctggtagggagcctggaaaagaatgaattcattactctggcacatgtgaatccccag
tcatttccggcaccaaaagaaaatgttgacaaggaagagtttcgtaccatgtgggtgatt
gggttagtgttgaagaagccagaaaattctgaaattctcagtattgatctcacctatgat
attcagtctttcacagatacagtttacagacaagcaataaatagcaagatgtttgagatg
gatatgaaaattgctgcaatgcatttaagaagaaaggaacttcatcagctacttccaaat
catgttcttcagaaaaaggaaacacatttaacagaaggtgtaagattgacagctgtgaat
gacagcagccttctcttgtctgtggacagtaaaaacagaatatctgcaccttcacctact
ggcactatgaagacaggcccactgactgtaaaccctcagggcagaaacagtcctgttctg
actgttatgacagcatcagtgaccaacatacagtttcctgaagtttccttgcagcatgtg
agtcccatagaaagctcagggattgccctgagtgaaagcattcctcaaattccctcacaa
cctaccatttctccaccacctaagcctaccatgaccagagtggtttcttcaacacatctg
gtaagccatccgctagaccttcaggaaatacagcaacgaacatacccaatcctatactag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (10)   

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