KEGG   Perognathus longimembris pacificus (Pacific pocket mouse): 125350502
Entry
125350502         CDS       T08928                                 
Symbol
Cwc22
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog isoform X1
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
plop  Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:plop00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:plop03041]
    125350502 (Cwc22)
Spliceosome [BR:plop03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    125350502 (Cwc22)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    125350502 (Cwc22)
SSDB
Motif
Pfam: MA3 MIF4G Cnd1 PRP38
Other DBs
NCBI-GeneID: 125350502
NCBI-ProteinID: XP_048201106
Position
4:45066775..45129270
AA seq 909 aa
MKSSVAHIKHPSGHDRRETYDMYKRSSSPEDSYAEQERSSRERDYFDYSRSDYSRSDYER
SRRGHSYDGSMESSRDREKRRDRERDVDRKRSRKSPSPRRRSPPPSVTQNSAQDEPTTKK
KKDDLDPLLTRTGGAYIPPAKLRMMQEQITDKNSLAYQRMSWEALKKSINGLINKVNISN
ISIIIQELLQENIVRGRGLLSRSVLQAQSASPIFTHVYAALVAIINSKFPQIGELILKRL
ILNFRKGYRRNDKQLCLTASKFVAHLINQNVAHEVLCLEMLTLLLERPTDDSVEVAIGFL
KECGLKLTQVSPRGINAIFERLRNILHESEIDKRVQYMIEVMFAVRKDGFKDHPVILEGL
DLVEEDDQFTHMLPLEDDYNPEDVLNVFKMDPNFMENEEKYKAIKKEILDEGDSDSNTDQ
DGGSSEEEEEEEEEGEEDEEGQKMTIHDKTEINLVSFRRTIYLAIQSSLDFEECAHKLLK
MEFPESQTKELCNMILDCCAQQRTYEKFFGLLAGRFCMLKKEYMESFESIFKEQYDTIHR
LETNKLRNVAKMFAHLLYTDSLPWSVLECIKLSEETTTSSSRIFVKIFFQELCEYMGLPK
LNARLKDETLQPFFEGLLPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNTPKVIVAQK
PDVEQNKSSLASSSSASSSSESDSSDSDSDSSESSSESSSEESDSSSSGSQSSASAKNIS
KGQGKTRSKEADKLIRNQQANDRRKEERIAEQRHQETRTERERRSERHRDQSSRDPNWRD
PINKHTSDRSIPFEGNSYSRAGNDRDQEMHIDLENKRGDPKKWRGERGNSFPENEKHRIR
SHDSENSRRKARSKSREKNRKHSTSKSDEDRYQNGSERRWEKSSRYSEHSRESKKNHDRR
REKSPAKQK
NT seq 2730 nt   +upstreamnt  +downstreamnt
atgaaaagcagtgtagcacatataaaacatccttctggtcatgacagaagggaaacctat
gatatgtacaagaggagttcctcaccagaagacagttatgcagaacaagaaaggtcttcc
cgggagagagattactttgattacagcaggtctgactacagtaggtcagactatgagcgt
tcaagaagaggacattcttatgatggcagcatggaatcaagcagggaccgagaaaaacgt
agagacagagaaagagatgtggatcggaaaaggtcccggaaatccccatctcctagaaga
agaagcccaccaccttcagtaacccagaattctgctcaggatgaacctactacaaagaag
aaaaaagatgatctagatcctctccttactcgaactggtggagcatatattcctcctgca
aaacttaggatgatgcaagaacagattacagacaaaaacagcttagcataccagagaatg
agctgggaagccctaaagaagtcaatcaatggtcttatcaacaaagtcaacatttccaat
ataagtattattattcaagagcttcttcaagaaaatatagttagaggaagagggctactg
tctagatctgttttgcaagcacaaagtgcttctccaatcttcacccatgtttatgcggca
ttagtggcaattatcaactcaaaatttccacaaattggagaattaatcctcaagaggctg
attcttaattttcgaaaaggctatcgaagaaatgataagcaactttgccttactgcttca
aaatttgtggcacatctcattaaccaaaatgtggcacatgaagttctgtgcttagagatg
ctcactttgctcctagaaaggcccacagatgacagtgttgaagtagccattggttttctt
aaggaatgtggcctcaaattaacacaagtgtcaccaagaggaatcaatgctatttttgaa
cgacttcgaaacattctacatgaatctgaaattgacaaaagagttcagtatatgattgaa
gtaatgtttgctgtgcgaaaggatggattcaaggaccaccctgttattctggaaggactt
gacttagttgaggaagacgaccaattcacccacatgcttcctttggaggatgactataat
ccagaagatgttcttaatgttttcaagatggatcctaactttatggagaatgaagagaag
tacaaagctattaagaaagaaatacttgatgaaggagacagtgattcaaacacagaccaa
gatggtgggagtagtgaagaggaagaagaagaggaggaagaaggagaagaagatgaagaa
ggacaaaaaatgactattcacgacaaaacagaaattaatctagtctcatttcgccgtaca
atatatcttgctattcagtcaagtttagattttgaagaatgtgcccacaaattgctgaaa
atggagtttcctgaaagtcaaacaaaagaactctgcaatatgatacttgattgctgtgct
cagcaaaggacatatgaaaaattttttggcttattagctgggcgattttgcatgctaaaa
aaagaatacatggaatcctttgaaagtatattcaaagaacagtatgacactatccatcgc
ttggagacaaacaaattgagaaatgttgccaagatgtttgctcacttattatacacggat
tcacttccatggagtgttcttgagtgtataaaactgagtgaagaaaccactacatcatcg
agtagaatttttgtcaaaatatttttccaggaactgtgtgaatatatgggtcttccaaaa
cttaatgcaagattaaaggatgaaaccctacaacctttctttgaaggattattaccccga
gacaatccaagaaacacacggtttgccatcaacttcttcacttctatagggcttggaggt
ttaacggatgaattgcgtgagcatctcaaaaacacacccaaggttatcgtggcacagaaa
ccagatgttgagcaaaataaatcctccctggcctcttcctcctcagcctcatcctcttca
gagtcagactcctctgactctgattctgacagcagtgagagcagttcagagtcttccagt
gaagagagcgactcctcatccagtggcagccagagctcagcctcagctaaaaatataagt
aagggacaagggaagaccagaagtaaagaagcagataaactgatcaggaaccaacaagca
aatgataggagaaaagaagaaagaattgcagaacaacggcaccaggaaactaggactgaa
agagaaagaaggtcagagagacacagagatcagagctcaagagatccaaattggagagat
cccattaataaacacacatcagacagaagtattccttttgaaggaaatagttacagtaga
gctgggaatgaccgagaccaagaaatgcatatagacttagaaaataagcgtggtgatcca
aaaaagtggagaggagaaaggggaaattcttttccggaaaatgagaagcacagaattcga
agtcatgatagtgaaaattctagaagaaaagcaagatcaaagtcaagggaaaagaataga
aaacattcaacatctaaaagtgatgaagataggtatcagaatggttctgagagacggtgg
gaaaaatctagtagatattctgaacattccagagaatcaaagaaaaatcatgaccggaga
agagaaaagtctccagcaaagcaaaaataa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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