KEGG   Perognathus longimembris pacificus (Pacific pocket mouse): 125364113
Entry
125364113         CDS       T08928                                 
Symbol
Tubb6
Name
(RefSeq) tubulin beta-6 chain
  KO
K07375  tubulin beta
Organism
plop  Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04145  Phagocytosis
plop04517  IgSF CAM signaling
plop04540  Gap junction
plop04814  Motor proteins
plop05010  Alzheimer disease
plop05012  Parkinson disease
plop05014  Amyotrophic lateral sclerosis
plop05016  Huntington disease
plop05020  Prion disease
plop05022  Pathways of neurodegeneration - multiple diseases
plop05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:plop00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    125364113 (Tubb6)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    125364113 (Tubb6)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    125364113 (Tubb6)
  09142 Cell motility
   04814 Motor proteins
    125364113 (Tubb6)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    125364113 (Tubb6)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    125364113 (Tubb6)
   05012 Parkinson disease
    125364113 (Tubb6)
   05014 Amyotrophic lateral sclerosis
    125364113 (Tubb6)
   05016 Huntington disease
    125364113 (Tubb6)
   05020 Prion disease
    125364113 (Tubb6)
   05022 Pathways of neurodegeneration - multiple diseases
    125364113 (Tubb6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:plop03036]
    125364113 (Tubb6)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:plop04812]
    125364113 (Tubb6)
   04147 Exosome [BR:plop04147]
    125364113 (Tubb6)
Chromosome and associated proteins [BR:plop03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     125364113 (Tubb6)
Cytoskeleton proteins [BR:plop04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    125364113 (Tubb6)
Exosome [BR:plop04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   125364113 (Tubb6)
  Exosomal proteins of colorectal cancer cells
   125364113 (Tubb6)
  Exosomal proteins of bladder cancer cells
   125364113 (Tubb6)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII
Other DBs
NCBI-GeneID: 125364113
NCBI-ProteinID: XP_048219518
Position
15:complement(9863779..9876310)
AA seq 451 aa
MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERISVYYNESSSQKYV
PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVEAVLDVV
RRECEHCECLQGFQLTHSLGGGTGSGLGTLLLSKVREEFPDRIMNTFSVMPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDARNMM
AACDPRHGRYLTVAAVFRGAMSMKEVDEQMLAVQNKNSSYFVEWIPNNVKVAVCDVPPRG
LKMAATFIGNSTAIQELFRRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVS
EYQQYQDAAAHDGEDEAFDDDGDGDDDEAGE
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgagggagatcgtgcacatccaggcgggccagtgcgggaaccagatcggcaccaagttc
tgggaagtgatcagcgatgagcacggcatcgacccggccgggggctacgtgggcgactcg
gcgctgcagctggagaggatcagcgtctactacaacgagtcatcctctcagaaatacgtg
cccagggctgccctggtggacttggagccaggcaccatggacagcgtgaggtctgggcct
ttcgggcagctcttccggcctgacaacttcattttcgggcagacgggcgccgggaacaac
tgggccaagggccactacacggagggcgcggagctggtggaggcggtgctggacgtggtg
cggcgggagtgcgagcactgcgagtgcctgcagggcttccagctgacgcactcgctgggc
ggcggcacgggctcggggctgggcacgctgctgctgagcaaggtgcgcgaggagttcccg
gaccgcatcatgaacaccttcagcgtgatgccgtcgcccaaggtgtcggacacggtggtg
gagccgtacaacgcgacgctgtcggtgcaccagctggtggagaacacggacgagacgtac
tgcatcgacaacgaggcgctgtacgacatctgcttccgcacgctcaagctggccacgccc
acctacggcgacctcaaccacctggtgtcggccaccatgagcggcgtcaccacgtcgctg
cgcttcccgggccagctcaacgccgacctgcgcaagctggccgtcaacatggtgcccttc
ccgcgcctgcacttcttcatgccgggcttcgcgccgctcacggcgcgcggcagccagcag
taccgcgcgctcaccgtgcccgagctcacgcagcagatgttcgacgcgcgcaacatgatg
gccgcctgcgacccgcgccacggccgctacctcaccgtggccgccgtgttccgcggcgcc
atgtccatgaaggaggtggacgagcagatgctggccgtgcagaacaagaacagcagctac
ttcgtcgagtggatccccaacaacgtcaaggtggccgtgtgcgacgtgcccccgcgcggc
ctcaagatggccgccaccttcatcggcaacagcacggccatccaggagctcttccggcgc
atctcggagcagttctccgccatgttccgccgcaaggccttcctgcactggttcacgggc
gagggcatggatgagatggagttcaccgaggccgagagcaacatgaacgacctggtgtcc
gagtaccagcagtaccaggacgccgccgcccacgacggggaggacgaggccttcgacgac
gatggcgacggcgacgacgacgaggcgggcgagtag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (7)   

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