KEGG   Paenibacillus lycopersici: GXP70_04320
Entry
GXP70_04320       CDS       T07013                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
plyc  Paenibacillus lycopersici
Pathway
plyc00521  Streptomycin biosynthesis
plyc00523  Polyketide sugar unit biosynthesis
plyc00525  Acarbose and validamycin biosynthesis
plyc00541  Biosynthesis of various nucleotide sugars
plyc01100  Metabolic pathways
plyc01110  Biosynthesis of secondary metabolites
plyc01250  Biosynthesis of nucleotide sugars
Module
plyc_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:plyc00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    GXP70_04320 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    GXP70_04320 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    GXP70_04320 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    GXP70_04320 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    GXP70_04320 (rfbB)
Enzymes [BR:plyc01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     GXP70_04320 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind 3Beta_HSD Polysacc_synt_2 NAD_binding_4 NAD_binding_10 Sacchrp_dh_NADP Statherin
Other DBs
NCBI-ProteinID: QHT59271
UniProt: A0A6C0FUW8
Position
973438..974427
AA seq 329 aa
MRILVTGGSGFIGSNFIHYMRREFPDFRIHNVDSLTYAGNPMNLAALEQDPQYCFSRADI
SDRLAMESILKQGFDAVVNFAAESHVDRSIADPGIFVQSNVVGTQTLLDLARQYGVAKFV
QVSTDEVYGSLGSTGLFTENTPLAPNSPYSASKAGADLLVRAYYETYGMNVNITRCSNNY
GPYQFPEKLIPLMIQQALQDKPLPVYGDGLNVRDWLYVEDHCSAIDLVLRQGRAGEVYNI
GGNNERNNLQVVKSILAALGKPESLISFVQDRLGHDRRYAIDASKIRSELGWTPKYDYES
GMKSTIQWYLDHEDWMASVHAGTYRSGRI
NT seq 990 nt   +upstreamnt  +downstreamnt
ttgaggattctcgttacgggaggctccggctttataggaagtaattttattcactatatg
cggcgtgaattcccggatttccggatccataatgttgattccttgacttatgcagggaat
ccgatgaatttggcggcattggaacaggacccgcagtattgttttagtagagctgatatt
tccgaccggcttgctatggagtcgatattgaagcaagggttcgatgcggtagtcaatttt
gcagccgagtcacatgttgatcgcagcattgctgaccccggtatttttgtgcaaagcaat
gttgtagggactcaaacccttcttgatttggccagacaatacggagtcgctaagtttgta
caggtatcgacggacgaagtgtacggttcgctcggcagtacggggctctttaccgagaat
accccgcttgcgccgaacagtccatattccgccagtaaggcgggggccgatctgcttgtg
cgcgcatattacgaaacttatggcatgaacgtcaatattacgcgttgttcaaacaactac
gggccatatcaatttccggagaagttgatcccgcttatgatccagcaagcgctgcaagac
aagccgttgcccgtttatggcgatggattgaatgttcgcgactggctgtatgtcgaagat
cattgcagtgctatcgatcttgtccttcgccagggaagagcgggagaggtatacaacatc
ggtggcaataatgaacgcaataatttgcaagtcgtgaaatcgatcttggcagcgctcggc
aagccggaatcgctcatctctttcgttcaagaccgcctaggccatgatcgaagatatgcc
atcgatgcctccaagatccgttcggagctaggttggacgccgaagtacgattatgaatcc
ggaatgaagtcaacgattcaatggtacttggatcacgaggattggatggcgtctgtgcat
gcaggtacatatcggagcggtcggatatga

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