KEGG T08022: 106903990

Poecilia mexicana (shortfin molly): 106903990

Entry

106903990         CDS       T08022

Symbol

cwc22

Name

(RefSeq) pre-mRNA-splicing factor CWC22 homolog

K13100

pre-mRNA-splicing factor CWC22

Organism

pmei Poecilia mexicana (shortfin molly)

Brite

KEGG Orthology (KO) [BR:pmei00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pmei03041]
    106903990 (cwc22)
Spliceosome [BR:pmei03041]
Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    106903990 (cwc22)
Complex C
   U4/U6.U5 tri-SnRNP related factors
    106903990 (cwc22)

SSDB

Motif

Pfam:

MA3 MIF4G New_glue Cnd1

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Ensembl:

UniProt:

Position

Unknown

AA seq 1002 aa
MDSPVRSESSSPKQRERNGPSDDESSPGAQGPQPANAREKSSKKESSPEGSNKSKSSSAS
SSDGSSSDDDEHQRALVKIRSSVAQIPRARSKESDRSSSRETKRSREEDGSESKENNRSR
SRERDGSKTKGRERSGSRSSREDRSRSRSREQRRSRSRSRERGRSRSRSRGRERSRSKGR
DRSRSRGRDRSRSRERDWNRDRFDRRRYARDRYDDRRDDRDRRFDRRANRDEDSERRRRG
RSGSPPADKESAAGEEPPVKKKKEELDPILTRTGGAYIPPAKLRMMQQQITDKSSLAYQR
MSWEALKKSINGLINKVNVSNIANIIQELLQENIVRGRGLLARSVLQAQAASPIFTHVYA
SVVAIINSKFPQIGELILKRLILSFRRSYRRNLKQQCLTASKFVAHLINQNVAHEVLCLE
MLTLLLERPTDDSVEVAISFLKECGLKLTEVSPRGINAIFERLRNILHESSIDKRVQYMI
EVMFAIRKDGFKDHPVIPEGLDLVDEDDQFTHMLPLDDEYNPEDILNVFKLDPDFLENEE
KYKTIKRDILDEGSSDSGEEGDGSDDEDEEEDENEEAGEDEKVTIFDKTEVNLVAFRRTI
YLAIQSSLDFEECAHKLIKMDFPDSQTKELCNMILDCCAQQRTYEKFFGLLAGRFCLLKK
EYMESFEAIFSEQYDTIHRLETNKLRNVARLFAHLLYTDSVPWSVLECIRMSEETTTSSS
RIFVKILFQELCAYMGLPKLNQRLKDPTLQTFFEGLFPRDNPRNTRFAINFFTSIGLGGL
TDELREHLKNAPKMIMTQNQEVESSDSSSSSSSSSSSESSSSDSSSDSDSDSSSSSSSSS
NSDVDSKRKKKKRKGRVEEKKKKGKDKKKKEKVDKRRKGGRSDNDNDAEKQAKKDRRERE
RDLEERVRRDPRGRRREDRSEEEERQEEEQEGQRRKADRQRDDGSERDRGREGDRGRDRD
GGRGREREYEEKREKERDGERDRERNKENRDRNREREERRRR

NT seq 3009 nt +upstreamnt +downstreamnt
atggattctccagtcagaagtgaaagctccagtcctaaacaaagagagagaaatggacct
tcagatgatgagtccagtccaggagcacaggggcctcagccagctaatgcaagggagaaa
agctctaagaaggaatcctctccagagggcagtaacaaatccaagagctcctccgcaagc
agctcagacggcagcagcagtgatgatgatgaacatcaacgtgctctagtgaagatcagg
agcagtgtggcacagataccaagagccaggtccaaagagagcgacagatcctcatcgaga
gagactaaacggtccagggaagaagacggatccgagtccaaagaaaacaaccgatccaga
tccagagagagagacggatccaagactaagggacgtgaaaggtcgggatccagatccagc
cgagaggatagatccagatccagatccagggaacaaagaaggtccaggtccagatccaga
gaacggggaagatcacggtctagatcaagaggacgggaaagatccaggtctaaggggaga
gacagatccaggtcaagaggacgggatcgttccagatccagagaaagagactggaacaga
gaccgcttcgacaggagacgctacgctcgagatcgctacgacgaccgacgcgacgacagg
gacagacgttttgatcggcgagccaacagagatgaagactcagaacgcaggaggcggggc
cgctctggctcccctccagcggacaaggagtcggccgccggcgaagagccgccggtcaag
aagaagaaagaggagctggacccgatcctgacgaggaccggtggcgcttacatcccgccg
gccaaactacgcatgatgcaacagcagatcacagacaagagcagcctggcctatcagagg
atgagctgggaggctctgaagaagtccatcaacggtctgatcaacaaagtcaatgtgtcc
aacattgcgaacatcatccaggagctgctgcaagaaaacatcgtcagaggaaggggcctt
ctggctcggtcagtgctgcaggcccaagcagcttcgcccatcttcactcacgtgtacgct
tctgtcgtggccatcatcaactcaaagttcccacagatcggagagctgatcctcaaacgc
ctcatcttaagcttcaggaggagctaccggcgcaacctcaagcaacagtgcctgacggcc
tcaaagttcgtggctcatctcatcaaccagaatgtggcccacgaggttttgtgtttggag
atgctcactctgctgctggagcgtccgactgacgacagcgtggaggtggccatctctttc
ctcaaggagtgtggactcaagctgactgaggtctcaccccgtggaatcaatgccatattc
gagcgtctcaggaatatcctccatgaatcgtccattgacaaaagggtccagtacatgatc
gaggtgatgtttgccatcaggaaggacggtttcaaagatcaccccgtcatccctgaaggc
ctggacctggtggacgaggacgaccagttcacccacatgctgccgctggatgacgagtac
aacccagaggacatcctcaacgtgttcaagttggacccagacttcctagagaacgaggag
aaatacaaaaccatcaagagagacatcctggatgaaggcagcagcgattcaggagaggag
ggcgatggcagcgacgatgaagacgaggaggaggacgagaacgaggaagcgggagaagat
gagaaggtcaccatctttgacaagacagaagtcaacctcgtcgctttcagaagaaccatt
tacctcgctattcagtccagcttggactttgaggaatgcgcccacaaactgatcaagatg
gactttcctgacagccaaacaaaagagctgtgcaacatgatcctggactgttgtgctcag
cagaggacctacgagaagttcttcggtctgcttgcagggaggttctgtctgttgaagaag
gagtacatggagagcttcgaggccatattttctgagcagtacgacacaatccaccgactg
gagaccaacaaactgaggaacgtggcccgactgttcgctcatctgctctacacagactcc
gtgccgtggagtgtgttggagtgtatccgaatgagcgaggagaccacaacatcatccagc
aggatctttgtgaaaatcctgtttcaggagctctgcgcctacatggggctcccaaaactc
aaccagcggctcaaagaccctaccctgcagacgttctttgagggtctttttcctcgtgac
aatccgagaaacactcgctttgccatcaacttcttcacctccattggactgggaggcttg
accgacgagttgagggaacacctgaagaacgcaccaaagatgatcatgactcaaaaccag
gaagttgaatcgtctgactcgtcgtcctcatcgtcgtcctcgtcgtcgtcggagtcttcc
tcctctgattcctccagcgattcagattctgactcctcttcctccagcagcagcagcagc
aactcagatgttgacagcaaacgcaagaagaagaagagaaagggacgcgttgaagagaag
aagaagaaaggaaaggacaagaagaagaaggagaaagtggacaagaggcgaaaaggaggc
aggagcgacaatgacaatgacgccgagaagcaggcgaagaaggacaggagggagcgcgag
cgtgacttggaggagcgcgtacgcagggacccccggggacgaaggcgtgaagacaggtcg
gaggaagaggagcggcaggaggaggagcaggagggccagagacgaaaagcggacaggcag
agagatgacggcagtgaaagagacagaggaagagaaggggacagagggagagacagagac
ggtgggcgagggagagagagagagtacgaagaaaagagagagaaggagagagacggagaa
agggatagagagaggaataaagagaacagagacaggaacagagagagggaggagaggagg
aggagatga

All links

Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (10)   

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