KEGG   Poecilia mexicana (shortfin molly): 106907217
Entry
106907217         CDS       T08022                                 
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta isoform X1
  KO
K05089  platelet-derived growth factor receptor beta [EC:2.7.10.1]
Organism
pmei  Poecilia mexicana (shortfin molly)
Pathway
pmei04010  MAPK signaling pathway
pmei04020  Calcium signaling pathway
pmei04510  Focal adhesion
pmei04518  Integrin signaling
pmei04519  Cadherin signaling
pmei04540  Gap junction
pmei04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:pmei00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    106907217 (pdgfrb)
   04020 Calcium signaling pathway
    106907217 (pdgfrb)
  09133 Signaling molecules and interaction
   04518 Integrin signaling
    106907217 (pdgfrb)
   04519 Cadherin signaling
    106907217 (pdgfrb)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    106907217 (pdgfrb)
   04540 Gap junction
    106907217 (pdgfrb)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    106907217 (pdgfrb)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:pmei01001]
    106907217 (pdgfrb)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:pmei04090]
    106907217 (pdgfrb)
Enzymes [BR:pmei01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.10  Protein-tyrosine kinases
    2.7.10.1  receptor protein-tyrosine kinase
     106907217 (pdgfrb)
Protein kinases [BR:pmei01001]
 Receptor tyrosine kinases (RTK)
  PDGFR family [OT]
   106907217 (pdgfrb)
CD molecules [BR:pmei04090]
 Proteins
  106907217 (pdgfrb)
SSDB
Motif
Pfam: PK_Tyr_Ser-Thr Ig_PDGFR_d4 Pkinase Ig_3 I-set Ig_2 VEGFR1-3_N_Ig-like ig V-set C2-set_2 Ig_VEGFR-1-like_5th RIFIN DUF3619 Glycophorin_A
Other DBs
NCBI-GeneID: 106907217
NCBI-ProteinID: XP_014828295
Ensembl: ENSPMEG00000012060
Position
Unknown
AA seq 1102 aa
MRRLMASVLHLMVTLTALVRFCPDVCSLEITPDDKEFVLARGSSLTLTCSGSSQAKWALK
KDDSTYYLNQLDENMKSRYKMFEPDATSVALNLTSVSWIHTGVYQCFDDVADEIQEVAVF
VPDPEVWFVKSIHGMVTKTSEESVVPCVATNPNITVILYERDTNKPIKGHYVPSEGYRAR
LEDRAYVCRGELNGEVKESQEFNVISIAVAEDINPYINSSKTVLKQGEPLTINCTVHGVE
LVYFSWNIPHTAVFQVEPETYFSPKMHSCLTFPRTMVGHSGNYVCHVQEMVVGVTASSSV
NITVLEHGFVEVKPAQRQNISAKLQENVELRVDIEAYPPPQVRWTKDGTTIRGDKAITIR
QDHEIRYVTILSLVRVRTEQNGLYAVIISNGDDKKEVLFDLEVQVPAQIKDLTDHNLPGM
SDVVTCLAEGFPAPIIQWYSCDSMLKCSNRTAAWQPLKPQPEVVSIQTNVSYNQTRKVSV
VKSQVTFHKPQQVTVRCAAANQAEQVSTRDVKLVSSTWFSQVAVLAAVLALVVIVILSII
ILIAIWRKKPRYEIRWKVIESVSQDGHEYIYVDPIHLPYDLAWEMPRENLVLGRTLGSGA
FGRVVEATAYGLTHSHSSTKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNLLGA
CTKHGPLYLVTEYCRYGDLVDYLHRNKDTFLQYYAEKNQDSGCIISRGSTPLSQRKGYVS
FGSESDGGYMDMSKDEPSFYVPMQEQLDTIKYADIQPSPYESPYQQDLYQEQGGGRTDLV
ICDSPTLTYDDLLGFSYQVAKGMDFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDI
MHDSNYISKGSTFLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDLPMNE
IFYSALKRGYRMAKPAHASDDVYEIMKKCWDEKFEKRPEFSLLVHNVGNMLTDSYKKRYN
QVNENFLKSDHPAVARTKPRLSSPFPIANPAFGSPSPITQSFPGRRSQSPRPGDGGREAD
AQEVIPSYNEYIIPLPDLKPDEVFTEVPSESPASSLAVEEEADSTSRDTAETLPEEDRVE
NTSERDALLGSMGTPEVEDSFL
NT seq 3309 nt   +upstreamnt  +downstreamnt
atgagaaggctgatggcatctgtgctccacctgatggtcactttaacagctttggtgcgt
ttctgcccagacgtgtgcagcctggagatcacccctgatgacaaagagtttgtcctggct
cgaggctcgtctctcaccctaacgtgctccggctccagccaggcaaagtgggcccttaag
aaggacgattcaacttactacctgaatcagctagatgagaatatgaaatcgagatacaag
atgtttgaacctgatgccacgtcggttgctctgaacctaacaagtgtgagttggatccat
actggcgtgtatcagtgctttgacgatgttgccgacgagatacaggaagtggcagttttt
gtcccagatcctgaagtttggtttgtaaagagcatccacggcatggtgacgaagaccagt
gaggaaagcgtcgtcccctgtgtggccaccaacccaaacatcactgtcatcctgtatgag
agggacacaaacaagcccattaaagggcattacgtacccagtgaggggtaccgggcgcgg
ctggaggacagagcgtacgtgtgccgtggagagctgaacggggaggtcaaagagtctcag
gagtttaacgtcatcagcattgcagtggccgaggacatcaacccttacatcaacagttca
aagacggtcctgaagcagggcgagccgctgactataaactgcacggtgcacggagtggag
ctggtgtatttctcttggaatattccacacaccgcggtttttcaggttgagccagaaacg
tatttctccccaaagatgcactcctgcctgaccttccctcgcaccatggtggggcacagc
ggaaactacgtgtgccacgtccaagaaatggtcgtgggcgtcacagcttcttcaagcgtc
aacatcaccgtgctcgaacacggctttgtggaggtgaaacctgctcagcggcaaaacatt
tcagccaagctccaggagaacgtggagctgagagtggacatcgaggcctaccctccccct
caggtccgctggaccaaagacgggaccaccatcaggggagacaaagctatcaccatcaga
caggatcatgaaataaggtatgtgaccattctcagcctggtgagggtgaggacggagcag
aatggcctctatgcggtcatcatttccaatggagacgacaaaaaggaagttctctttgac
ctggaagtccaagtccctgctcagattaaagacctgaccgaccacaatctcccggggatg
agtgacgtggtgacctgcctcgctgaagggtttccagctccgatcatacagtggtacagc
tgtgacagcatgctcaagtgtagcaaccggacagcagcatggcagccgctgaagccgcag
ccggaggtggtgagcatccaaaccaatgtcagctacaaccagacgcgtaaagtcagcgtg
gtgaagagccaggtgaccttccacaagcctcagcaggtcacagttcgctgcgcggccgcc
aaccaggccgagcaagtcagcacgagggacgtcaaactggtgtccagcacgtggttctcc
caggtggcagtgctggctgctgttctggccttagtggtcattgttattctgtcgataatc
atcctcatcgctatatggaggaagaaacctcgctatgaaatcagatggaaggtgatagag
tctgtgagccaggatggacatgagtacatttatgtggaccccatccatctgccctatgac
ctggcctgggagatgcccagagaaaacctggtgctgggtcgcacgcttggatcaggagca
tttggcagggtggtcgaggcaactgcgtacggtctcacgcattcccactccagcacaaag
gtggcagtgaaaatgctgaaatccacagccaggaggagtgagactcaggccctgatgtcc
gagctgaagatcatgagtcacctgggacctcacctcaacattgttaacctgctcggagcc
tgcaccaaacatggccctctctacctggttactgagtactgtcgctatggtgacctagtg
gactacctgcacaggaacaaggacaccttcctgcagtactacgctgagaagaaccaggac
agcggctgcatcatctccagaggaagtacccctctcagccagagaaaaggttatgtgtcc
ttcggaagtgagagcgacggaggatacatggacatgagcaaagacgagccttccttctac
gtgcccatgcaggagcagctggacacgattaaatacgcagacatccagccgtccccgtat
gaatccccctaccagcaggacctctaccaggaacaaggtgggggcagaacggatctggtg
atctgcgactctcccaccctcacctacgacgatctcctgggcttcagttaccaggtggca
aagggaatggacttcctggcctcaaagaactgtgtccatcgtgacctggcggccaggaac
gtattgatctgtgaaggcaagctggtgaagatctgtgacttcggcctggccagggacatc
atgcatgattccaactacatctccaaaggcagcacattcctgccccttaagtggatggca
ccggaaagcatttttcacaatttgtacaccaccttgagcgacgtttggtcatatggcatt
cttctttgggaaattttcactctgggaggaactccttaccctgatttgcccatgaatgaa
atcttctacagtgctttgaagagaggctacaggatggccaagcctgctcacgcctctgac
gacgtgtatgagatcatgaagaagtgctgggatgagaaatttgagaagaggcccgagttc
tccctcctggtgcacaatgtgggaaacatgctgacggacagctacaaaaagagatacaac
caagtgaatgaaaacttcctcaagagcgaccaccctgccgtggctcgcaccaaacctcgc
ctctcctctccatttccaattgccaacccggccttcggctctccctctccaatcactcag
tccttcccgggacgccgcagccagagcccgaggcctggagacggcgggcgagaggcggac
gcacaggaagtcatcccttcgtacaacgagtacatcattcctctcccagacctaaagccc
gacgaagttttcaccgaagtgccgtcggaaagccctgcaagctctctggctgtggaggag
gaggctgactccacatctcgggacacggctgaaactcttccagaggaagaccgggtggag
aacacgagcgagagggacgcactgctgggctccatggggacgcctgaggtagaagacagc
ttcctgtag

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (14)   
   Pfam (14)   
All databases (21)   

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