KEGG   Petromyzon marinus (sea lamprey): 116943911
Entry
116943911         CDS       T09614                                 
Symbol
CWC22
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog isoform X1
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
pmrn  Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:pmrn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pmrn03041]
    116943911 (CWC22)
Spliceosome [BR:pmrn03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    116943911 (CWC22)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    116943911 (CWC22)
SSDB
Motif
Pfam: MA3 MIF4G Cornifin DUF7026
Other DBs
NCBI-GeneID: 116943911
NCBI-ProteinID: XP_032813144
UniProt: A0AAJ7T8H1
Position
19:9023360..9119457
AA seq 1564 aa
MSSKERSRDRDKDHEKENDRSGDRSDDREEGRRSSRAKHDNSSDKTKDKRKERDMEHDES
SDSDQSSSTSEDGELDKSRERDIDDDGSKHKDRDGTKDKRKDRDLDKANYGDGTSDQDKN
GSNSRGQEGVADRYRKREGGRNRKGDRDHGRERSSDKDEDSDMDVDRRKENSDKNGSGKR
NKDRNEDGDMNEEGDNVKSIERDKGKDRKRHRHGGKEKDGDRERDWDRYRDSGGDSGVDE
NEVRDGERDRDGEHGVRDRERDRDGGRDRDREKDRGRNRDRDRERDDERYRDRHDDEDRY
GERDGFRNKDRDRDRHRDLDEDEGRYRDRDRNRNMIEDEGRYRDGGRDRYRDRGRDRDVE
RRKRGKSPTQDEAERGHELGDANAVETVRGRIEPDGEVTGGEEPPTKKKKDEVDPILTRS
GGAYIPPARLRMMQEQIADKSSLAYQRMSWEALKKSINGLINKVNVSNIFNIIKELLQEN
IVRGRGMLSRSMIQAQMASPTFTHVYSALTAIINSKFPQIGELILRRLILNFRKGYRRND
KPLCLSTSKYIAHLVNQNVAHEVLSLEILTLLLERPTDDSVEVAVGFLKECGLKLTEVSP
RGINAIFERLRNILHESQIDKRVQYMIEVMFAIRKDGFKDHPVIPEGLDLVEEDDQFTHM
LPLEDDYNSEDLLNIFKLDPDFLNNEEKYKAIKKEILDEGSSGEGESGEGEGSDSDDEEE
DEEEAEKQKMTILDQTETNLVSFRRTIYLAIQSSLDFEECAHKLLKMELPAGQEKELCNM
ILDCCAQQRTYEKFFGLLAGRFSLLKKEYMESYEALFREQYEAIHRLETNKLRNVAKLFA
HLLFTDSIPWSVLESVVLSEDTTTSSSRIFVKILFQELCEYMGLPRLNTRLKDETLQPFF
EGLFPRDNPRNTRFAINFFTSIGLGGLTDELRDHLKIAPKLIMAQRQEVESDTSSSSSSS
SSDETDDTDDDSDSSSDDDVDSSSGSGSSGSSESTGSADSSSEEESSSSSSSDSDDTSAR
KKRKGGKEDKQVSGKGKAQKKDASQTKRTSRRGREGDEETSQRGDRRQREAQRSETNRER
GERGGDAERKEKQKKRRGHSGETSTKAKRGGRDASPDGRRGDSSQERDVTRKDGGRVKGA
DQKGKKDQSKDKGSNRPSKSDDGQKHRGREHGSSASPQINDEHRRRKTNQSTDEEHEEPR
KSKRHGKKKKKNDQAKDDVQPGRKPNRSDGKRARHDTSDEDEEEDMQRSRRRKKASDEKE
RNDDDDRGRHEGKKSNHKADGSGKRSGRPEERTDKRKEHDHSSDMSMEMDGGRQKKNSRE
NNHVKVQETARNMSPEPFRDRSQDRHRDRAPVGTRGGSQDRHQDRFQDRRRDNSEERHID
GSQEKQNTFPDRHQERSSDRRKDKSADRRREKSPERRKEISPERRRERSPERRRERSPER
RREKSPERRKERSPERRKEKSPERHRERSPERRKEKSPERRRERSPERRRERSPERRRER
SPERRRERSQDRTRDKGEAKGGSKIDSRLSSRKARDQERSRERDHQGRPRKRERDSSHDR
DRRS
NT seq 4695 nt   +upstreamnt  +downstreamnt
atgtcgtccaaagaacgaagtcgtgaccgtgacaaggatcatgaaaaggagaacgaccgg
agtggggacaggagcgatgacagagaagagggtaggaggagcagcagagcaaagcatgac
aatagcagtgacaagaccaaggacaaacgcaaggaaagagatatggagcatgatgaatcc
agtgacagtgaccagagcagtagtacgagtgaggatggagagctggataagagtagggaa
agagacattgatgatgatggaagcaagcacaaagatagggacggcaccaaggacaaacgc
aaggatagggatttagacaaggcgaattatggggatggaaccagtgatcaagataagaat
ggcagcaatagcagaggtcaggaaggtgtggctgataggtacagaaagagggaaggaggc
agaaacaggaaaggggaccgagatcatggcagggagagaagcagtgataaagacgaggat
agtgatatggatgtggatcggagaaaagaaaatagtgacaaaaatggcagtgggaagaga
aacaaggataggaatgaggatggagacatgaatgaggaaggggacaatgtcaaaagcata
gaaagagataagggcaaggacaggaaaagacatagacatgggggtaaggaaaaagatggg
gaccgagagagagactgggaccggtacagagatagtggtggggatagtggtgtggatgaa
aatgaggtgagagatggggagagagacagagatggggaacatggagtgagggacagggag
agagatagagatggaggtagagaccgggatagagagaaggaccgtggcaggaatcgagat
cgagacagagagagggatgatgaaaggtacagagatagacatgacgatgaggacagatat
ggagaaagagatggattcagaaacaaggacagagatagggacagacacagggacttggat
gaggacgagggcagatacagagatagggacagaaataggaatatgattgaggacgagggc
agatacagagatggcggcagggacagatacagggacagaggaagagaccgtgatgttgag
cggaggaagcgaggaaaatctcctacccaggatgaggccgagagaggtcatgagttggga
gatgcaaacgcagtggagacagtgcggggacgaattgagccagacggggaggtaacaggt
ggagaggagccaccaactaagaaaaagaaggatgaagtggatcccatcctgacacgctca
gggggagcatacattcctcctgcaaggctgcgcatgatgcaagagcaaattgcagacaag
agcagtttggcgtatcagcgaatgagctgggaagctctgaagaaatcaataaatggcttg
atcaacaaagtaaacgtttcaaacatcttcaacatcatcaaggagctgttgcaagagaac
attgttcggggacgtggtatgttgtcacgctccatgatccaagcacagatggcctcccca
acgttcacacacgtctactctgcgctcaccgccatcatcaactccaagtttccgcagatt
ggcgagctcattctacggcgtctcatactcaactttcgcaagggataccgccgtaacgac
aagccactctgcctgtccacaagcaagtacattgctcaccttgtgaaccagaatgtggcg
cacgaagtgctgtccctggagattctcactctgctgctggagcggccgacggatgacagc
gtggaggtggctgttggcttcctcaaggagtgtggtctcaagctcacagaggtctcaccg
cggggaatcaacgcgatctttgagaggctgcggaacattctgcacgagtcccagatcgac
aagcgcgtgcagtacatgattgaggtgatgttcgccatccgcaaggatggcttcaaggac
cacccggtgatccctgaaggcctggaccttgtggaagaggatgaccagttcacgcacatg
ctgccgctggaggatgactacaactctgaagaccttttaaatattttcaagctggatcca
gattttttgaacaatgaagaaaaatacaaagccatcaagaaagaaatattggatgaaggc
agcagcggggaaggcgagagcggggagggggaaggtagtgacagcgacgatgaagaagag
gatgaagaggaagcagagaaacaaaagatgacaattttggaccaaacagaaacaaacctg
gtttctttccgtcgcaccatctaccttgccatacagtcaagcttggattttgaagagtgt
gcccacaagctactaaagatggagttaccagctggccaagagaaggagttatgcaacatg
attctggactgctgcgctcaacagaggacatacgaaaagttttttgggcttctggcaggt
agattttcccttctgaagaaggagtacatggagagctacgaggctttgttcagggagcag
tacgaggcgatccaccggctggagacgaataaactccgcaacgtggccaagctctttgcc
cacctgctgttcaccgactccataccgtggagcgtgctggagtctgtggttctcagtgaa
gacaccaccacatcctcgagccgtatttttgtcaagatcctttttcaagagctttgcgaa
tacatgggacttccacgcctcaacacgcgcttaaaggacgaaacactgcagccgttcttt
gaagggctctttccacgggacaacccacgcaacaccagattcgccatcaatttcttcacc
tccattgggctcgggggtctcaccgacgagctgcgcgaccatttgaaaatcgcccccaag
ctgatcatggcccagcgccaggaggtcgagtccgacacctcgtcctcttcatcctcgtca
tcctcggacgagacggacgacacagacgacgattctgactcgtcctctgacgacgacgtc
gactcgtcttcgggctcgggcagttccggcagcagcgagagcaccggctcggcggactct
tccagcgaagaggaaagcagcagcagcagcagcagtgactcagatgacacgagtgccagg
aaaaagagaaaaggtggaaaagaagacaagcaagtctccggaaaggggaaggctcagaag
aaagatgcgagccaaactaagaggacgagtagacgaggtagggagggcgatgaagagacc
tctcaaagaggggatcgtaggcaaagagaggcgcagagaagtgagacaaatcgggaaaga
ggagagaggggcggcgatgcagagaggaaggagaagcagaaaaaacgcaggggtcacagc
ggagagacgagcaccaaagcaaagcgtggcggcagagacgccagccctgatgggagacgc
ggagactcgagccaggagagggatgtcacaaggaaggatggtggtcgagtcaaaggtgcc
gatcaaaagggaaagaaagatcaaagcaaggataagggcagcaacaggccgagcaaaagc
gacgacgggcagaagcatagaggtcgagaacatggcagcagtgcaagcccacaaataaac
gatgagcatcgacggagaaagacgaatcaaagtacagatgaggagcacgaagaaccaagg
aagtccaaaagacatggcaagaagaagaagaagaatgatcaagcaaaggatgacgtacag
cccggacggaaaccaaatcgaagcgacggcaaaagggcccgtcatgacacaagcgatgag
gatgaggaggaggacatgcagagaagcagaagacgtaagaaagctagtgatgagaaagag
aggaatgatgatgatgatcgtggaaggcatgaaggaaagaaaagtaatcacaaggcagat
ggaagtgggaagagatctggcagacctgaagagagaactgacaaacgaaaggagcatgac
cattccagtgacatgtccatggaaatggacgggggaagacaaaaaaagaattccagagaa
aataatcacgtgaaggtgcaggagacagccaggaacatgtccccagaaccctttcgagac
cgatcccaagacaggcatagggacagagctccagtgggaactcggggtggatctcaggac
agacaccaggacagatttcaagaccgacgtagggacaattcagaagaaagacacatagac
ggatcgcaagagaaacagaatacatttccagatagacatcaagagagatcctcagacaga
cgcaaggataaatctgcagacagacgcagggagaaatctccagagaggcgcaaggagata
tctccagagagacgcagggagagatctccagagagacgcagggagagatctccagagaga
cgcagggagaaatctccagagagacgcaaggagagatctccagagagacgcaaggagaaa
tctccagagagacacagggagagatctccagagagacgcaaggagaaatctccagagaga
cgcagggagagatctccagagagacgcagggagagatctccagaaagacgcagggagaga
tctccagagagacgcagggagagatcgcaagacagaaccagagacaagggtgaggcaaaa
ggaggcagcaaaattgatagccgtttgagcagcaggaaagcaagagatcaagagaggtca
cgagagagggatcaccagggcagaccccgcaaaagagaacgtgacagttcccacgatcgc
gatcgccgcagctag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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