KEGG   Paenibacillus mucilaginosus KNP414: KNP414_06404
Entry
KNP414_06404      CDS       T01550                                 
Name
(GenBank) YrvE
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pms  Paenibacillus mucilaginosus KNP414
Pathway
pms03410  Base excision repair
pms03430  Mismatch repair
pms03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pms00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    KNP414_06404
   03430 Mismatch repair
    KNP414_06404
   03440 Homologous recombination
    KNP414_06404
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pms03400]
    KNP414_06404
DNA repair and recombination proteins [BR:pms03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     KNP414_06404
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     KNP414_06404
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      KNP414_06404
SSDB
Motif
Pfam: RecJ_OB DHH ssDNA-exonuc_C DHHA1
Other DBs
NCBI-ProteinID: AEI44925
UniProt: F8FMW5
Position
complement(7067191..7069620)
AA seq 809 aa
MLQAKARWNIGEAEESAVKALSQQLGLSPLLSRLLVVRGMTDTGHAAEFLDGGADHIHDP
FLLDGMERAVGRIRRALETGERIRIYGDYDADGVSSTTLMVYLLRQLECTFDYYIPHRVT
EGYGLNNGAIDEAHRQGVGLIITVDTGISAVEEIAHAASLGMDVIVTDHHEPPEVLPEAY
TLINPKKPGCPYPYKHLAGVGVALKLAQALLGRWPEELLPYAAIGTVADLMPLTEENRII
VKRGIEQMRSTSNCGIKALLAVAGIPVREVNSTHIGFALGPRINASGRLLSADTAVKLLT
TEDEREAERLAQELDLLNKERQRIVDEMAKEAFALVERQREKSGSLPKAIVLAQENWNVG
VIGIVASKIVDRYYRPTVILGIDKESGMAKGSARSIAGFDMHKALTHCADLMDHYGGHQM
AAGMTLSRENLGEFARRLDTLAEEWLQPQDFVPLLQADAECEFSEISLESILDLEKLGPF
GTGNPSPRFVFRGLKLSDLRTMGKEQQHLKLSLKGAGETAAALEAVAFNKGALSDWITPS
ARIDLLGELSVNEWNGVRRPQILLQDLQVTDLQLFDWRGTPKPERRVAELCERLQLRPQG
HDHLPAAVVVFRSWIPPELKEAARGCALWYCDLEGHLHPAGGLSGSLPLHEARDIVLYHL
PERLEQLHAVAVQAGAAERYYAAWGGAEDKHAALLPDRAEFKAVYGALAGAGSGGSTVQS
IGARTRLDPAVVRFILDVFTELGFVEASGEAYRLLPAVEKKDLTASLLYRSRMNHKELEE
RLLYTTARELLGTLVSEAHNTTTLMEGIL
NT seq 2430 nt   +upstreamnt  +downstreamnt
atgctacaagccaaggcaagatggaacatcggggaagcggaagaatcggcggtgaaggcc
ctctcgcagcagctgggtctctcaccgctgctttcgcgtcttctggtggttcggggaatg
acagacaccgggcatgctgccgaatttttggatgggggagcggatcacattcacgatccg
ttccttttggatggaatggaacgtgcggtcgggcggatccgccgggcgctggagaccggg
gagcgaatccggatctacggggactacgacgccgacggagtcagctccacgacgctgatg
gtctacctgctccggcagctggagtgtacgttcgattattatatcccccaccgggtcacc
gaggggtacggtctgaacaacggggcgatcgatgaagcccaccggcagggcgtcggactg
atcattaccgtggatacggggatcagcgccgtggaagagatcgcgcatgcggcttctctg
ggcatggatgtgattgtcacagaccaccacgagccgccggaggtgctgccggaagcgtac
acgctcatcaacccgaagaagccgggctgtccttatccgtacaagcacttggccggtgtg
ggggtagcactgaagctggcgcaggcgctgctcggccgctggccggaggagctcctgcca
tatgcggcgatcggcacggtcgccgacctcatgccgctcacggaagagaaccggatcatc
gtaaagcggggcatcgagcagatgcgctccacgtcgaactgcggcatcaaggcgctcctg
gccgtggccggcattccggtgcgcgaggtgaattcgacgcatatcggctttgcgctgggc
cctcggatcaacgcaagcgggaggctgctcagcgccgatacggcggtgaagctgctgacg
acggaggacgaacgggaagccgaacggctggctcaggagctagacctgctgaacaaggag
cggcagcgcatcgtggacgagatggccaaggaggcgttcgccttggttgagcgccagcgg
gagaagtccggctcactccccaaagcgatcgtgctcgcccaggagaactggaacgtcggg
gtcatcgggatcgtcgcctctaagatcgtggaccggtattaccggccgacggtgattctc
ggaatcgacaaggagagcgggatggccaaaggctccgcccggtcgatcgccggcttcgac
atgcacaaggcgctgacccactgcgccgacctcatggatcattacggcgggcaccagatg
gccgccggcatgaccttgagccgggagaacctgggcgaattcgcacggaggctcgatacc
ctggcggaggagtggctgcagccgcaggacttcgtgccgctgctgcaggctgacgccgag
tgcgaattcagcgagatcagcctcgagagcattctcgatctcgagaagctggggccgttc
gggacgggcaatccgtcaccgaggttcgtgttccgcgggctgaagctcagcgacctgcgg
acgatgggcaaggagcagcagcacctcaagctctcattgaagggggcgggggagacagcg
gccgccctggaggccgtggccttcaacaagggggcgctgagcgattggattacgcctagc
gcccggatcgatctgctcggggagctgtccgtgaacgaatggaacggcgtccgccgtccg
cagattctgctgcaggatctgcaggtgacggacctccagctcttcgactggcggggaacg
cccaagccggagcgcagggtggctgagctgtgcgagcggctccagcttcgtccgcagggc
catgaccaccttccggcggcggtggtcgtgttccgctcctggatcccgccggagctgaag
gaagccgcccggggctgcgctctctggtactgcgatctggaggggcatctgcatcccgcc
ggcggcctgagcggaagcctgccgctccatgaggcccgggacatcgtgctctatcacctg
ccggagcggctcgaacagctccatgcggttgccgtgcaggccggtgccgcggagcggtat
tacgcggcttggggcggcgcggaagacaaacatgccgccctgctgccggaccgtgcggag
ttcaaggcggtctacggcgcactcgccggggccgggtccggcggcagcacggtacagagc
atcggcgccaggacccgtctggaccccgccgtggtccggttcatcctggacgtcttcacg
gagcttgggttcgtggaagcgtcgggggaggcctaccgcctccttccggccgtcgagaag
aaggatctgacggcatccctgctctaccgcagccggatgaatcacaaggaactagaagaa
cgactgctttacaccacagcaagagagctgctgggcaccctggtgtccgaggctcataac
acaaccacattaatggagggaatcctatga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (7)   

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