KEGG   Prunus mume (Japanese apricot): 103327640
Entry
103327640         CDS       T03196                                 
Name
(RefSeq) ubiquitin-like protein ATG12
  KO
K08336  ubiquitin-like protein ATG12
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    103327640
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pmum04131]
    103327640
   04121 Ubiquitin system [BR:pmum04121]
    103327640
   03029 Mitochondrial biogenesis [BR:pmum03029]
    103327640
Membrane trafficking [BR:pmum04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    103327640
Ubiquitin system [BR:pmum04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   103327640
Mitochondrial biogenesis [BR:pmum03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    103327640
SSDB
Motif
Pfam: APG12
Other DBs
NCBI-GeneID: 103327640
NCBI-ProteinID: XP_008228204
UniProt: A0ABM0NQA0
Position
LG4:complement(2938273..2940872)
AA seq 95 aa
MSTVESPSAVRKVVVHLRATGDAPILKQAKFKILGTDKFAKVIEFLRRQLHRDTLFVYVN
SAFSPNPDELVIDLYNNFGFDGKLVVNYACSMAWG
NT seq 288 nt   +upstreamnt  +downstreamnt
atgtcgaccgtggagtctccgagcgctgttagaaaagtggttgttcatctgagagctact
ggtgatgcccctatactgaagcaagccaaatttaagattcttggaactgacaagtttgcg
aaagtgattgagtttctaagaaggcaacttcaccgggataccttgtttgtgtatgtcaac
agtgcattctctccaaacccagatgaattggtgattgatctctataataattttggtttt
gatggtaaactggtggtcaattatgcttgctccatggcatggggctga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (7)   

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