KEGG   Polynucleobacter necessarius: Pnec_0219
Entry
Pnec_0219         CDS       T00683                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
pne  Polynucleobacter necessarius
Pathway
pne02024  Quorum sensing
pne03060  Protein export
pne03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pne00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Pnec_0219
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Pnec_0219
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Pnec_0219
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pne02044]
    Pnec_0219
Enzymes [BR:pne01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Pnec_0219
Secretion system [BR:pne02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Pnec_0219
  Eukaryotic Sec-SRP protein
   Pnec_0219
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 CbiA Zeta_toxin T2SSE AAA_31 cobW AAA_16 YqeC nSTAND3 Helicase_RecD ATP_bind_1 AAA_14 AAA_19 AAA_30 Thymidylate_kin AAA_33 APS_kinase Rad17 TsaE KTI12 ArsA_ATPase YAcAr
Other DBs
NCBI-ProteinID: ACB43516
UniProt: B1XT39
Position
complement(198257..199639)
AA seq 460 aa
MLENLTDRLSRVVKTMRGQARLTEANTAKMLREIRLALLEADVALPVVKSLLEQIKFKAL
GEEVVGSLSPGQALVGVVQRELAQVMQSDTNQSGELNLATQPPAVILMAGLQGAGKTTSV
GKLAKWLQEKKKKKVLTVSCDVYRPAAIEQLETVTKQVGAEFFPSDISQKPNDIALAALD
WARHHYFDVVLVDTAGRLGIDEALMQEIKTLHSSLNPIETLFVVDAMLGQDAVNTAKAFH
EALPLTGVILTKLDGDSRGGAALSVRQITGVPLKFIGVAEKMDGLEAFDAERMANRILGM
GDILALVEQAQQHVDVAKAEKLVSKISKGGFDLEDFRDQLMQMQKMGGMVSLMDKLPSQV
AQAASKTNLSNADKQTTRMRGIIDSMTPQERRKPELLKASRKRRIAAGSGVEVQEVNRLL
AQFEQMQTMMKQFKGGKMARTMASMAAKGAAKGIGGLFKK
NT seq 1383 nt   +upstreamnt  +downstreamnt
atgctagaaaacctcaccgaccgcctatctcgcgttgttaaaacaatgcggggccaagcc
cgcctcaccgaggccaataccgcaaaaatgctgcgagaaatccgcctagccttattagag
gctgacgtagcgcttcctgtagtgaagtctttgcttgagcaaattaaatttaaagccctt
ggcgaggaagtggttggaagcctaagccctggccaagcactggttggggtagtacaacgt
gaactcgcccaagtaatgcagagtgacacaaatcaaagtggtgaactcaatttagcaacc
cagcctccagcagtcattttgatggccggtttgcaaggtgcaggtaaaaccacttctgta
ggcaagctagcaaagtggctacaagagaaaaagaaaaagaaggttctcaccgtatcttgt
gacgtatatcgtccagcagcaattgagcaattagaaacggtcaccaaacaagttggtgca
gaattttttccaagcgacatcagccaaaaaccaaatgatattgcactagcggcccttgac
tgggcgcgccaccactactttgacgtagtgttggttgataccgcaggtcgtcttggtatt
gatgaagcgctcatgcaagaaattaaaactttgcatagcagtctgaaccctattgaaacc
ttgttcgtagtcgatgcgatgctcggtcaagatgccgtcaataccgccaaggctttccac
gaggcattgccactcactggcgtcattctgaccaagctagacggtgactcccgtggcggt
gccgcactctcagttcgccagattactggtgtgcccctcaaattcatcggcgtagctgaa
aagatggatggcctggaagcgtttgatgccgaacgtatggctaaccgcatcttgggcatg
ggcgatattcttgccttagttgaacaagctcaacaacatgtagacgttgctaaagcagaa
aaattagtcagcaagatttccaaaggtggctttgaccttgaagacttccgtgaccagctt
atgcaaatgcaaaaaatgggtggtatggtcagcctaatggataagttgcctagccaagtg
gcgcaagctgcttcgaaaactaatttaagcaatgctgataagcaaactacacgcatgcgt
ggaatcattgacagtatgaccccgcaagagcgcagaaaacctgaattactaaaagctagt
cgtaaacgtcgtatagccgcaggctctggagtggaggtgcaagaagtaaatcgcctactt
gctcagttcgagcaaatgcaaaccatgatgaagcaatttaagggcgggaaaatggcgcgc
accatggcaagcatggctgcaaaaggggccgccaagggcattggcgggctcttcaagaaa
taa

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